Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHROOM3

Gene Name Gene ID Reads Annotation
SHROOM3 35 shroom family member 3, transcript variant X1











Genes with expression patterns similar to SHROOM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHROOM3 35 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 shroom family member 3, transcript variant X1
2. HECA ENSGALG00000013824 14 1.854 - - - - - 0.854 1.000 - - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
3. WNK1 ENSGALG00000012992 67 1.774 - - - - - - 1.000 0.774 - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
4. RIMBP2 ENSGALG00000002579 10 1.734 - - - - 1.000 - - - - 0.734 RIMS binding protein 2 [Source:NCBI gene;Acc:374105]
5. GHSR ENSGALG00000027947 24 1.703 - - 0.703 - - - 1.000 - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
6. PKD2 ENSGALG00000010921 55 1.533 - - - - - - 0.724 0.809 - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
7. UBXN6 ENSGALG00000001146 122 1 - - - - - - 1.000 - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
8. C3orf58 ENSGALG00000002347 27 1 - - - - - 1.000 - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
9. CNP1 ENSGALG00000028638 56 1 - - - - - - 1.000 - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
10. SLC16A3 ENSGALG00000002728 323 1 - - - - 1.000 - - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
11. ZIC4 ENSGALG00000006810 2 1 - - - - - 1.000 - - - - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
12. PREP2 PREP2 238 1 - - - - - 1.000 - - - -
13. ENSGALG00000027026 ENSGALG00000027026 3 1 - - - - - 1.000 - - - -
14. CD4 ENSGALG00000014477 19 1 - - - - - 1.000 - - - - CD4 molecule [Source:NCBI gene;Acc:395362]
15. OLAH ENSGALG00000043833 3 1 - - - - - - 1.000 - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
16. VENTX VENTX 50 1 - - - - - - 1.000 - - -
17. MAP7D2 ENSGALG00000016415 31 1 - - - - 1.000 - - - - - MAP7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25899]
18. TYRP1 ENSGALG00000015205 4 1 - - - - - - 1.000 - - - tyrosinase related protein 1 [Source:NCBI gene;Acc:395913]
19. WWTR1 ENSGALG00000010412 5 1 - - - - - - 1.000 - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
20. RAG2 ENSGALG00000046408 1 1 - - - - 1.000 - - - - - recombination activating gene 2 [Source:NCBI gene;Acc:423165]
21. TRPM6 3 1 - - - - 1.000 - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
22. TTC39B ENSGALG00000005416 12 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
23. PLG ENSGALG00000004293 11 1 - - - - 1.000 - - - - - plasminogen
24. ENSGALG00000028222 ENSGALG00000028222 44 1 - - - - - - 1.000 - - -
25. LMLN ENSGALG00000012067 15 1 - - - - - - 1.000 - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
26. SNORA44 SNORA44 29 1 - - - - - 1.000 - - - -
27. SOS2 ENSGALG00000012273 41 1 - - - - 1.000 - - - - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
28. TEX36 ENSGALG00000044030 0 1 - - - - - 1.000 - - - - testis expressed 36
29. ASMT ENSGALG00000016685 3 1 - - - - - - 1.000 - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
30. ZNF143 ENSGALG00000005787 345 1 - - - - - - 1.000 - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
31. GPR26 ENSGALG00000009684 1 1 - - - - 1.000 - - - - - G protein-coupled receptor 26 [Source:HGNC Symbol;Acc:HGNC:4481]
32. FOXB1 ENSGALG00000027498 0 1 - - - - - 1.000 - - - - forkhead box B1 [Source:HGNC Symbol;Acc:HGNC:3799]
33. MAP3K19 ENSGALG00000028457 17 1 - - - - 1.000 - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
34. SERPINB10 ENSGALG00000019552 1 1 - - - - 1.000 - - - - - serpin family B member 10 [Source:HGNC Symbol;Acc:HGNC:8942]
35. AIRE AIRE 3 1 - - - - - 1.000 - - - -
36. SEPT12 ENSGALG00000029027 611 1 - - - - - - 1.000 - - - septin 12 [Source:HGNC Symbol;Acc:HGNC:26348]
37. CFH ENSGALG00000002431 31 1 - - - - 1.000 - - - - - complement factor H, transcript variant X1
38. ABCA8 ENSGALG00000021399 11 1 - - - - 1.000 - - - - - ATP binding cassette subfamily A member 8
39. RASAL2 ENSGALG00000004323 55 1 - - - - - - 1.000 - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
40. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - - - - 1.000 - - -
41. DNAJC28 ENSGALG00000037414 6 1 - - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
42. RASA4 ENSGALG00000001876 178 1 - - - - - - 1.000 - - - RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
43. SOX30 ENSGALG00000045860 5 1 - - - - - 1.000 - - - - SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
44. GTF3C6 ENSGALG00000015044 112 1 - - - - - - 1.000 - - - general transcription factor IIIC subunit 6 [Source:NCBI gene;Acc:421754]
45. ARSA ENSGALG00000035824 299 1 - - - - - - 1.000 - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
46. SEMA4G ENSGALG00000026957 11 1 - - - - - - 1.000 - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
47. MYPN ENSGALG00000003925 6 1 - - - - - 1.000 - - - - myopalladin [Source:HGNC Symbol;Acc:HGNC:23246]
48. TPH2 ENSGALG00000010198 5 1 - - - - - 1.000 - - - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
49. SCN3B ENSGALG00000006490 48 1 - - - - - - 1.000 - - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
50. TMEFF2 ENSGALG00000007759 93 1 - - - - - 1.000 - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
51. ENSGALG00000028684 ENSGALG00000028684 1 1 - - - - 1.000 - - - - -
52. NEK8 ENSGALG00000003979 4 1 - - - - 1.000 - - - - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
53. ENSGALG00000013751 ENSGALG00000013751 26 1 - - - - - 1.000 - - - -
54. NIPAL1 ENSGALG00000027986 11 1 - - - - 1.000 - - - - - NIPA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27194]
55. PAX5 ENSGALG00000016431 1 1 - - - - - - 1.000 - - - paired box 5 [Source:NCBI gene;Acc:387330]
56. ANO10 ENSGALG00000042371 2 1 - - - - 1.000 - - - - - anoctamin 10 [Source:HGNC Symbol;Acc:HGNC:25519]
57. ENSGALG00000016682 ENSGALG00000016682 1 1 - - - - 1.000 - - - - -
58. PGM3 ENSGALG00000015854 5 1 - - - - - 1.000 - - - - phosphoglucomutase 3 [Source:HGNC Symbol;Acc:HGNC:8907]
59. SLC5A7 ENSGALG00000016804 93 1 - - - - - - 1.000 - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
60. TAT ENSGALG00000000893 11 1 - - - - - 1.000 - - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
61. SLC26A4 ENSGALG00000007998 2 1 - - - - - - 1.000 - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
62. CARF ENSGALG00000008474 6 1 - - - - - - 1.000 - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
63. PLA2G4EL6 ENSGALG00000020458 4 1 - - - - - 1.000 - - - - phospholipase A2 group IVE-like 6
64. SIM2 ENSGALG00000016044 5 1 - - - - 1.000 - - - - - SIM bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:10883]
65. C9orf3 C9orf3 47 1 - - - - - - 1.000 - - -
66. NME8 ENSGALG00000029677 2 1 - - - - 1.000 - - - - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
67. P2RY12 ENSGALG00000036470 20 1 - - - - 1.000 - - - - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
68. NANP ENSGALG00000023188 0 1 - - - - - 1.000 - - - - N-acetylneuraminic acid phosphatase [Source:NCBI gene;Acc:421467]
69. ENSGALG00000025856 ENSGALG00000025856 3 1 - - - - - 1.000 - - - -
70. NUDT3 ENSGALG00000002830 7 1 - - - - - 1.000 - - - - nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
71. CFAP99 ENSGALG00000015685 32 1 - - - - - - 1.000 - - - cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
72. HSD11B1L ENSGALG00000012860 4 1 - - - - 1.000 - - - - - hydroxysteroid 11-beta dehydrogenase 1 like [Source:NCBI gene;Acc:408034]
73. CRTAM ENSGALG00000006527 6 1 - - - - 1.000 - - - - - cytotoxic and regulatory T cell molecule [Source:NCBI gene;Acc:395342]
74. MPEG1 ENSGALG00000028536 99 1 - - - - - 1.000 - - - - macrophage expressed 1 [Source:HGNC Symbol;Acc:HGNC:29619]
75. FAM173B ENSGALG00000013043 4 1 - - - - - 1.000 - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
76. SIX4 ENSGALG00000017389 10 1 - - - - - - 1.000 - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
77. EPB42 ENSGALG00000021230 20 1 - - - - - - 1.000 - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
78. C14orf166B C14orf166B 4 1 - - - - 1.000 - - - - -
79. FAM240B ENSGALG00000021163 6 1 - - - - 1.000 - - - - - family with sequence similarity 240 member B [Source:NCBI gene;Acc:427470]
80. KIAA0513 ENSGALG00000025938 46 1 - - - - 1.000 - - - - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
81. CACNG4 ENSGALG00000026091 6 1 - - - - - 1.000 - - - - calcium voltage-gated channel auxiliary subunit gamma 4 [Source:NCBI gene;Acc:373924]
82. TINAG ENSGALG00000016300 5 1 - - - - 1.000 - - - - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
83. SCN1A ENSGALG00000010943 6 1 - - - - - - 1.000 - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
84. SLC35B2 ENSGALG00000010174 3 1 - - - - - 1.000 - - - - solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]
85. GLRA3 ENSGALG00000010781 4 1 - - - - - 1.000 - - - - glycine receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4328]
86. MTCH1 ENSGALG00000000186 0 1 - - - - - 1.000 - - - - mitochondrial carrier 1 [Source:HGNC Symbol;Acc:HGNC:17586]
87. ACVR1C ENSGALG00000041257 37 0.995 - - - - - - - 0.995 - - activin A receptor type 1C [Source:HGNC Symbol;Acc:HGNC:18123]
88. A1CF ENSGALG00000003765 36 0.986 - - - - 0.986 - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
89. CBFA2T2 ENSGALG00000003096 61 0.983 - - - - - - - 0.983 - - CBFA2/RUNX1 translocation partner 2 [Source:NCBI gene;Acc:419155]
90. MAPK11 ENSGALG00000040023 15 0.983 - - - - - - - 0.983 - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
91. LMOD3 ENSGALG00000018946 7 0.983 - - - - - - - 0.983 - - leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]
92. PKIA ENSGALG00000035525 20 0.981 - - - - - 0.981 - - - - protein kinase (cAMP-dependent, catalytic) inhibitor alpha [Source:NCBI gene;Acc:396333]
93. ST8SIA1 ENSGALG00000013211 14 0.98 - - - - - - - 0.980 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
94. DLK1 ENSGALG00000011244 5 0.98 - - - - - - - 0.980 - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
95. FK21 ENSGALG00000026348 11 0.98 - - - - - - - 0.980 - - feather keratin 21 [Source:NCBI gene;Acc:101409259]
96. CLDN16 ENSGALG00000025821 14 0.98 - - - - - - - 0.980 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
97. TNFRSF8 ENSGALG00000039741 6 0.98 - - - - - - - 0.980 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
98. MMP9 ENSGALG00000006992 78 0.98 - - - - - - - 0.980 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
99. RS1 ENSGALG00000016523 11 0.98 - - - - - - - 0.980 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
100. FABP1 ENSGALG00000015937 12 0.98 - - - - - - - 0.980 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]

There are 204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA