Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHOX2

Gene Name Gene ID Reads Annotation
SHOX2 ENSGALG00000039728 2 short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]











Genes with expression patterns similar to SHOX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHOX2 ENSGALG00000039728 2 2 - - 1.000 - - - - - - 1.000 short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]
2. RUFY4 2 1 - - 1.000 - - - - - - - RUN and FYVE domain containing 4, transcript variant X5
3. CPS1 ENSGALG00000002944 2 1 - - - - - - - - - 1.000 carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
4. TSSK3 4 1 - - - - - - - - - 1.000 testis specific serine kinase 3
5. SPTSSBL ENSGALG00000026131 70 1 - - - - - - - - - 1.000 serine palmitoyltransferase small subunit B-like, transcript variant X6
6. SNORD95 SNORD95 6 1 - - - - - - - - - 1.000
7. VTG2 ENSGALG00000001863 1 1 - - - - - - - - - 1.000 vitellogenin 2 [Source:NCBI gene;Acc:424533]
8. CHIA ENSGALG00000023760 1 1 - - 1.000 - - - - - - - chitinase, acidic [Source:NCBI gene;Acc:395072]
9. CDC42EP3 ENSGALG00000010551 15 1 - - 1.000 - - - - - - - CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
10. ENSGALG00000003188 ENSGALG00000003188 2 1 - - - - - - - - - 1.000
11. RCAN2 ENSGALG00000016709 8 1 - - 1.000 - - - - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
12. STEAP4 ENSGALG00000008997 8 1 - - - - - - - - - 1.000 STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
13. NEURL2 ENSGALG00000006854 22 1 - - - - - - - - - 1.000 neuralized E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:16156]
14. SNORD47 SNORD47 61 1 - - 1.000 - - - - - - -
15. VSIG1 ENSGALG00000008290 16 1 - - - - - - - - - 1.000 V-set and immunoglobulin domain containing 1 [Source:NCBI gene;Acc:414795]
16. ENSGALG00000007032 ENSGALG00000007032 1 1 - - 1.000 - - - - - - -
17. CRIP2 ENSGALG00000026471 4 1 - - - - - - - - - 1.000 cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
18. ABI1 ENSGALG00000007547 12 1 - - - - - - - - - 1.000 abl interactor 1 [Source:NCBI gene;Acc:420489]
19. SCUBE3 ENSGALG00000002675 12 1 - - 1.000 - - - - - - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
20. ADD2 ENSGALG00000026948 1 1 - - - - - - - - - 1.000 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
21. DEPTOR ENSGALG00000005790 6 1 - - - - - - - - - 1.000 DEP domain containing MTOR-interacting protein
22. FOXRED2 ENSGALG00000012530 36 1 - - - - - - - - - 1.000 FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
23. GSAP ENSGALG00000008312 12 1 - - - - - - - - - 1.000 gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
24. GLRA3 ENSGALG00000010781 4 1 - - - - - - - - - 1.000 glycine receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4328]
25. ADCYAP1 ENSGALG00000014858 9 1 - - - - - - - - - 1.000 adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
26. ENSGALG00000026422 ENSGALG00000026422 34 1 - - - - - - - - - 1.000
27. U6_2 U6_2 1 1 - - - - - - - - - 1.000
28. COL8A2 ENSGALG00000002298 27 1 - - - - - - - - - 1.000 collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
29. HBEGF ENSGALG00000000949 15 1 - - 1.000 - - - - - - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
30. ZFYVE28 15 1 - - - - - - - - - 1.000 zinc finger FYVE-type containing 28, transcript variant X3
31. SERINC4 ENSGALG00000042029 21 1 - - - - - - - - - 1.000 serine incorporator 4 [Source:HGNC Symbol;Acc:HGNC:32237]
32. RFX5 ENSGALG00000000836 1 1 - - - - - - - - - 1.000 regulatory factor X5 [Source:HGNC Symbol;Acc:HGNC:9986]
33. CTDSP1 ENSGALG00000027768 2 1 - - 1.000 - - - - - - - CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
34. SNORD81 SNORD81 105 1 - - - - - - - - - 1.000
35. TMEM52 ENSGALG00000037021 1 1 - - - - - - - - - 1.000 transmembrane protein 52, transcript variant X8
36. ENSGALG00000012435 ENSGALG00000012435 3 1 - - 1.000 - - - - - - -
37. NRSN2 ENSGALG00000045961 2 1 - - - - - - - - - 1.000 neurensin 2 [Source:HGNC Symbol;Acc:HGNC:16229]
38. C4orf33 ENSGALG00000010108 4 1 - - - - - - - - - 1.000 chromosome 4 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:27025]
39. GFI1 ENSGALG00000043650 2 1 - - 1.000 - - - - - - - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
40. ANO10 ENSGALG00000042371 2 1 - - 1.000 - - - - - - - anoctamin 10 [Source:HGNC Symbol;Acc:HGNC:25519]
41. EGF ENSGALG00000012155 8 1 - - - - - - - - - 1.000 epidermal growth factor [Source:NCBI gene;Acc:408035]
42. CREB3 ENSGALG00000002523 23 1 - - - - - - - - - 1.000 cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
43. TDH ENSGALG00000016651 3 1 - - 1.000 - - - - - - - L-threonine dehydrogenase (pseudogene)
44. NCF2 ENSGALG00000004700 9 1 - - 1.000 - - - - - - - neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:HGNC:7661]
45. ETNK1 ENSGALG00000013205 18 0.988 - - 0.988 - - - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
46. VEPH1 ENSGALG00000009682 51 0.97 - - - - - - - - - 0.970 ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
47. BAI2 BAI2 11 0.952 - - 0.952 - - - - - - -
48. CLCNKB ENSGALG00000003713 27 0.949 - - 0.949 - - - - - - - chloride voltage-gated channel Kb, transcript variant X3
49. ENSGALG00000007420 ENSGALG00000007420 7 0.94 - - - - - - - - - 0.940
50. STAM2 ENSGALG00000012513 9 0.911 - - 0.911 - - - - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
51. RANBP3L 19 0.906 - - 0.906 - - - - - - - RAN binding protein 3 like, transcript variant X2
52. SLC6A17 ENSGALG00000000394 10 0.888 - - 0.888 - - - - - - - solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
53. HSPB7 ENSGALG00000023772 8 0.883 - - - - - - - - - 0.883 heat shock protein family B (small) member 7 [Source:HGNC Symbol;Acc:HGNC:5249]
54. CXorf36 ENSGALG00000016215 108 0.883 - - - - - - - - - 0.883 chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
55. TRIM66 ENSGALG00000005958 5 0.88 - - - - - - - - - 0.880 tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
56. ZNF827 ENSGALG00000009982 7 0.88 - - 0.880 - - - - - - - zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
57. LRRC7 ENSGALG00000011284 13 0.879 - - 0.879 - - - - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
58. LOC422926 ENSGALG00000027090 16 0.879 - - 0.879 - - - - - - - uncharacterized LOC422926
59. PPP1R16B ENSGALG00000003568 25 0.87 - - 0.870 - - - - - - - protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
60. COL15A1 ENSGALG00000034119 9 0.859 - - 0.859 - - - - - - - collagen type XV alpha 1 chain, transcript variant X6
61. CYTH3 ENSGALG00000007149 10 0.856 - - - - - - - - - 0.856 cytohesin 3, transcript variant X2
62. CPO ENSGALG00000008516 3 0.853 - - 0.853 - - - - - - - carboxypeptidase O [Source:HGNC Symbol;Acc:HGNC:21011]
63. TRERF1 ENSGALG00000009896 42 0.847 - - 0.847 - - - - - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
64. TUBE1 ENSGALG00000015017 39 0.846 - - 0.846 - - - - - - - tubulin epsilon 1, transcript variant X1
65. GABRG4 GABRG4 16 0.839 - - 0.839 - - - - - - -
66. S1PR1 ENSGALG00000005208 12 0.833 - - 0.833 - - - - - - - sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
67. SNORA75 SNORA75 41 0.833 - - 0.833 - - - - - - -
68. PHEX ENSGALG00000016375 4 0.833 - - 0.833 - - - - - - - phosphate regulating endopeptidase homolog, X-linked [Source:NCBI gene;Acc:395777]
69. LNPEP ENSGALG00000015301 13 0.828 - - 0.828 - - - - - - - leucyl and cystinyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:6656]
70. TRAF3 ENSGALG00000011389 7 0.826 - - 0.826 - - - - - - - TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]
71. KIAA1045 KIAA1045 23 0.823 - - 0.823 - - - - - - -
72. TNFRSF6B ENSGALG00000006106 12 0.822 - - - - - - - - - 0.822 TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
73. ARSD ENSGALG00000016648 33 0.82 - - 0.820 - - - - - - - arylsulfatase D, transcript variant X1
74. GPR143 ENSGALG00000016615 14 0.806 - - 0.806 - - - - - - - G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
75. DSTYK ENSGALG00000041123 12 0.806 - - 0.806 - - - - - - - dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
76. CCDC175 17 0.802 - - 0.802 - - - - - - - coiled-coil domain containing 175
77. RASAL2 ENSGALG00000004323 55 0.794 - - 0.794 - - - - - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
78. PPP1R36 ENSGALG00000040026 24 0.773 - - 0.773 - - - - - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
79. MICALL2 ENSGALG00000004070 23 0.773 - - 0.773 - - - - - - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
80. PTPN7 ENSGALG00000036093 92 0.772 - - - - - - - - - 0.772 protein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:HGNC:9659]
81. HOPX ENSGALG00000011404 10 0.77 - - 0.770 - - - - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
82. RXRA ENSGALG00000042055 153 0.767 - - 0.767 - - - - - - - retinoid X receptor alpha [Source:HGNC Symbol;Acc:HGNC:10477]
83. ENSGALG00000027201 ENSGALG00000027201 12 0.765 - - 0.765 - - - - - - -
84. DBX2 ENSGALG00000009604 367 0.765 - - - - - - - - - 0.765 developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
85. PREP2 PREP2 238 0.76 - - - - - - - - - 0.760
86. GOS2 GOS2 116 0.747 - - 0.747 - - - - - - -
87. ENG ENSGALG00000033039 169 0.745 - - 0.745 - - - - - - - endoglin [Source:NCBI gene;Acc:771557]
88. DTX4 ENSGALG00000010835 25 0.744 - - - - - - - - - 0.744 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
89. ENSGALG00000023100 ENSGALG00000023100 12 0.743 - - - - - - - - - 0.743
90. HMHA1 HMHA1 929 0.743 - - 0.743 - - - - - - -
91. MEIOB ENSGALG00000005411 6 0.743 - - - - - - - - - 0.743 meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
92. ENSGALG00000025912 ENSGALG00000025912 4 0.742 - - 0.742 - - - - - - -
93. IL2RG ENSGALG00000005638 21 0.739 - - 0.739 - - - - - - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
94. NPDC1 ENSGALG00000042635 12 0.738 - - - - - - - - - 0.738 neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
95. MYH1E ENSGALG00000029606 3 0.737 - - 0.737 - - - - - - - myosin, heavy chain 1E, skeletal muscle [Source:NCBI gene;Acc:427788]
96. PDGFB ENSGALG00000012178 509 0.736 - - 0.736 - - - - - - - platelet-derived growth factor beta polypeptide [Source:NCBI gene;Acc:374128]
97. CHRND ENSGALG00000007899 55 0.735 - - - - - - - - - 0.735 cholinergic receptor nicotinic delta subunit [Source:NCBI gene;Acc:424940]
98. ST3GAL2 ENSGALG00000002651 20 0.735 - - 0.735 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
99. ESM1 ENSGALG00000027707 328 0.729 - - 0.729 - - - - - - - endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]
100. SLC5A1 ENSGALG00000006728 36 0.728 - - 0.728 - - - - - - - solute carrier family 5 member 1 [Source:NCBI gene;Acc:395496]

There are 16 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA