Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCRN1

Gene Name Gene ID Reads Annotation
SCRN1 ENSGALG00000011176 3783 secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]











Genes with expression patterns similar to SCRN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCRN1 ENSGALG00000011176 3783 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
2. MSRA ENSGALG00000028032 2607 1.782 - - 0.827 - - - 0.955 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
3. SOD2 ENSGALG00000011661 13178 1.705 - - 0.764 - - - 0.941 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
4. SLC25A14 ENSGALG00000004063 5574 1.7 - - 0.764 - - - 0.936 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
5. METTL11A METTL11A 11876 1.682 - - 0.713 - - - 0.969 - - -
6. AK6 ENSGALG00000020534 4791 1.675 - - 0.705 - - - 0.970 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
7. ZIC1 ENSGALG00000040532 6543 1.64 - - - - - - 0.872 - 0.768 - Zic family member 1 [Source:NCBI gene;Acc:374103]
8. RTN4IP1 ENSGALG00000015343 4366 1.607 - - - - - - 0.884 0.723 - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
9. MAP2 ENSGALG00000002789 6597 1.601 - - 0.815 - - - - - - 0.786 microtubule associated protein 2, transcript variant X33
10. PTDSS1 ENSGALG00000030185 5515 1.58 - - 0.789 - - - 0.791 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
11. TAGLN3 ENSGALG00000015379 7865 1.57 - - - - - - - - 0.769 0.801 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
12. NSG1 ENSGALG00000015010 5829 1.561 - - 0.845 - - - - 0.716 - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
13. LRP2 ENSGALG00000010858 363 1.559 - - 0.838 - - - - 0.721 - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
14. FZD3 ENSGALG00000042308 3356 1.523 - - - - - - - - 0.788 0.735 frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
15. ZNF830 ENSGALG00000013156 3896 1.508 - - 0.714 - - - - 0.794 - - zinc finger protein 830
16. MAST4 ENSGALG00000014784 4153 1.495 - - 0.776 - - - - 0.719 - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
17. TMEM14A ENSGALG00000019894 5279 1.485 - - 0.765 - - - - 0.720 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
18. NFS1 ENSGALG00000001568 7113 1.46 - - 0.711 - - - 0.749 - - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
19. CRMP1B CRMP1B 18633 1.448 - - - - 0.710 - - - - 0.738
20. GPM6A ENSGALG00000043480 2133 1.446 - - - - - - - - 0.736 0.710 glycoprotein M6A [Source:NCBI gene;Acc:422569]
21. RGMA ENSGALG00000039173 12874 1.428 - - - - - - - - 0.702 0.726 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
22. ARHGAP29 ENSGALG00000005683 3622 0.981 - - - - - - 0.981 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
23. MYST2 MYST2 8078 0.977 - - - - - - 0.977 - - -
24. SHQ1 ENSGALG00000007798 1982 0.975 - - - - - - 0.975 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
25. MRE11A MRE11A 5754 0.975 - - - - - - 0.975 - - -
26. EI24 ENSGALG00000038097 24081 0.975 - - - - - - 0.975 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
27. DISP1 3281 0.975 - - - - - - 0.975 - - - dispatched RND transporter family member 1, transcript variant X3
28. MAP1LC3A ENSGALG00000038721 2230 0.974 - - - - - - 0.974 - - - microtubule associated protein 1 light chain 3 alpha
29. INTS10 ENSGALG00000010130 6320 0.973 - - - - - - 0.973 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
30. PPP3R1 ENSGALG00000023648 3417 0.973 - - - - - - 0.973 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
31. TMEM108 ENSGALG00000036412 2903 0.972 - - - - - - 0.972 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
32. LATS2 4776 0.972 - - - - - - 0.972 - - - large tumor suppressor kinase 2
33. CLCN3 ENSGALG00000009674 3704 0.972 - - - - - - 0.972 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
34. AKAP7 ENSGALG00000029794 3287 0.972 - - - - - - 0.972 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
35. ATN1 ENSGALG00000014554 3270 0.972 - - - - - - 0.972 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
36. DNA2 ENSGALG00000004037 5426 0.97 - - - - - - 0.970 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
37. EIF4G3 ENSGALG00000010084 5881 0.97 - - - - - - 0.970 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
38. PNO1 ENSGALG00000009093 11153 0.97 - - - - - - 0.970 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
39. MOB1B ENSGALG00000011573 567 0.97 - - - - - - 0.970 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
40. RRN3 ENSGALG00000041989 3934 0.969 - - - - - - 0.969 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
41. NCOA4 ENSGALG00000002066 10544 0.969 - - - - - - 0.969 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
42. ABCD3 ENSGALG00000005647 4844 0.969 - - - - - - 0.969 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
43. LEPROTL1 ENSGALG00000024482 4251 0.968 - - - - - - 0.968 - - - leptin receptor overlapping transcript-like 1
44. ARID4A ENSGALG00000012037 8554 0.968 - - - - - - 0.968 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
45. HACE1 ENSGALG00000015415 1194 0.968 - - - - - - 0.968 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
46. NDUFB8 ENSGALG00000005704 5781 0.968 - - - - - - 0.968 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
47. IRAK2 ENSGALG00000008407 5934 0.968 - - - - - - 0.968 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
48. ENSGALG00000027854 ENSGALG00000027854 5007 0.968 - - - - - - 0.968 - - -
49. SREBF2 ENSGALG00000041687 4519 0.967 - - - - - - 0.967 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
50. YBX1 ENSGALG00000004848 20992 0.967 - - - - - - 0.967 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
51. BFAR ENSGALG00000003111 1778 0.966 - - - - - - 0.966 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
52. CETN2 ENSGALG00000007510 1688 0.966 - - - - - - 0.966 - - - centrin 2 [Source:NCBI gene;Acc:422303]
53. GCC2 ENSGALG00000016806 1085 0.965 - - - - - - 0.965 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
54. gga-mir-6643 ENSGALG00000027935 4442 0.965 - - - - - - 0.965 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
55. KCTD9 ENSGALG00000000275 3455 0.965 - - - - - - 0.965 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
56. KLHL29 ENSGALG00000016495 582 0.965 - - - - - - 0.965 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
57. DNAJA3 ENSGALG00000007821 3963 0.965 - - - - - - 0.965 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
58. CAMKK2 ENSGALG00000040131 2795 0.965 - - - - - - 0.965 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
59. MOB2 ENSGALG00000030499 3658 0.964 - - - - - - 0.964 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
60. SLC1A1 ENSGALG00000010187 637 0.964 - - - - - - 0.964 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
61. TM9SF3 ENSGALG00000005534 15290 0.964 - - - - - - 0.964 - - - transmembrane 9 superfamily member 3
62. POPDC3 ENSGALG00000027420 700 0.964 - - - - - - 0.964 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
63. NPHP3 ENSGALG00000034586 1465 0.963 - - - - - - 0.963 - - - nephrocystin 3, transcript variant X1
64. POLR3E ENSGALG00000007008 4010 0.962 - - - - - - 0.962 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
65. UBAC1 ENSGALG00000042564 598 0.962 - - - - - - 0.962 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
66. ENSGALG00000002923 ENSGALG00000002923 2233 0.962 - - - - - - 0.962 - - -
67. SDCCAG8 ENSGALG00000010713 311 0.962 - - - - - - 0.962 - - - serologically defined colon cancer antigen 8, transcript variant X5
68. TBCCD1 ENSGALG00000006566 2696 0.962 - - - - - - 0.962 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
69. MTFMT ENSGALG00000007353 805 0.962 - - - - - - 0.962 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
70. ATE1 ENSGALG00000009502 3751 0.961 - - - - - - 0.961 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
71. BCAS1 ENSGALG00000007796 379 0.961 - - - - - - 0.961 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
72. RILPL2 ENSGALG00000003321 5632 0.961 - - - - - - 0.961 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
73. MED6 ENSGALG00000029743 9414 0.959 - - - - - - 0.959 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
74. RPA1 ENSGALG00000003072 8023 0.959 - - - - - - 0.959 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
75. LACTB2 ENSGALG00000038745 3460 0.959 - - - - - - 0.959 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
76. LMNB2 ENSGALG00000000470 4364 0.959 - - - - - - 0.959 - - - lamin B2 [Source:NCBI gene;Acc:396222]
77. SDF4 ENSGALG00000001872 6382 0.957 - - - - - - 0.957 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
78. CCND1 ENSGALG00000007555 6715 0.957 - - - - - - 0.957 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
79. AP2B1 ENSGALG00000042125 13229 0.956 - - - - - - 0.956 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
80. H2AFY_1 ENSGALG00000040141 4895 0.956 - - - - - - 0.956 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
81. NDUFA9 ENSGALG00000017282 14358 0.955 - - - - - - 0.955 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
82. ZMYND11 ENSGALG00000006599 5740 0.954 - - - - - - 0.954 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
83. THOC2 ENSGALG00000008507 9501 0.954 - - - - - - 0.954 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
84. XRN1 ENSGALG00000002706 4014 0.952 - - - - - - 0.952 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
85. OGFOD1 6926 0.952 - - - - - - 0.952 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
86. E2F6 ENSGALG00000016454 4747 0.951 - - - - - - 0.951 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
87. RBBP6 ENSGALG00000006043 9708 0.951 - - - - - - 0.951 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
88. SEMA4B ENSGALG00000008297 11202 0.95 - - - - - - 0.950 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
89. RBM12B ENSGALG00000035129 4314 0.949 - - - - - - 0.949 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
90. CHMP7 ENSGALG00000000409 8967 0.946 - - - - - - 0.946 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
91. POLA1 ENSGALG00000016312 9440 0.944 - - - - - - 0.944 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
92. IMPACT ENSGALG00000015093 1334 0.943 - - - - - - 0.943 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
93. BTAF1 ENSGALG00000030598 3556 0.942 - - - - - - 0.942 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
94. MED7 ENSGALG00000003870 4244 0.939 - - - - - - 0.939 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
95. ARNT2 ENSGALG00000006445 7050 0.936 - - - - - - 0.936 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
96. BPTF ENSGALG00000038222 7521 0.936 - - - - - - 0.936 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
97. RGCC ENSGALG00000016954 1282 0.934 - - - - - - 0.934 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
98. PRCP ENSGALG00000037521 4012 0.931 - - - - - - 0.931 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
99. POR ENSGALG00000002053 5223 0.931 - - - - - - 0.931 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
100. PPIF ENSGALG00000004809 5586 0.929 - - - - - - 0.929 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]

There are 467 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA