Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCNM1

Gene Name Gene ID Reads Annotation
SCNM1 ENSGALG00000046607 665 sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]











Genes with expression patterns similar to SCNM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCNM1 ENSGALG00000046607 665 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
2. EML5 ENSGALG00000010639 25 0.965 - - 0.965 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
3. AHR2 ENSGALG00000023742 21 0.964 - - 0.964 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
4. EPHA1 ENSGALG00000014687 174 0.964 - - 0.964 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
5. ATXN3 ENSGALG00000010766 48 0.964 - - 0.964 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
6. GALNT11 ENSGALG00000006233 210 0.963 - - 0.963 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
7. C15orf60 C15orf60 16 0.961 - - 0.961 - - - - - - -
8. DNALI1 ENSGALG00000001996 64 0.958 - - 0.958 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
9. FAM3B ENSGALG00000016140 111 0.957 - - 0.957 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
10. ENSGALG00000028778 ENSGALG00000028778 47 0.954 - - 0.954 - - - - - - -
11. LLGL1 ENSGALG00000014408 15 0.954 - - 0.954 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
12. DLX6 ENSGALG00000023195 29 0.954 - - 0.954 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
13. FSCN2 ENSGALG00000023354 13 0.954 - - 0.954 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
14. OTOA ENSGALG00000007070 94 0.953 - - 0.953 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
15. KPNA5 ENSGALG00000014937 28 0.953 - - 0.953 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
16. PDZK1IP1 ENSGALG00000010473 551 0.953 - - 0.953 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
17. TMEM132B ENSGALG00000002742 122 0.95 - - 0.950 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
18. ENSGALG00000005723 ENSGALG00000005723 36 0.949 - - 0.949 - - - - - - -
19. DFFB ENSGALG00000036295 88 0.949 - - 0.949 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
20. PHTF2 ENSGALG00000008335 722 0.944 - - 0.944 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
21. TOX3 ENSGALG00000034649 54 0.944 - - 0.944 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
22. DIXDC1 ENSGALG00000007929 67 0.943 - - 0.943 - - - - - - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
23. PRC1 ENSGALG00000012836 20 0.943 - - 0.943 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
24. CREB3 ENSGALG00000002523 23 0.942 - - 0.942 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
25. PIP5K1C ENSGALG00000000784 492 0.94 - - 0.940 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
26. SCN5A ENSGALG00000006112 137 0.934 - - 0.934 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
27. CD300A CD300A 173 0.934 - - 0.934 - - - - - - -
28. SEC22C ENSGALG00000005268 1151 0.933 - - 0.933 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
29. BMP2K ENSGALG00000010885 37 0.933 - - 0.933 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
30. FAM199X ENSGALG00000008872 44 0.931 - - 0.931 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
31. ZZEF1 ENSGALG00000001546 767 0.931 - - 0.931 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
32. FANCB ENSGALG00000016569 1193 0.928 - - 0.928 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
33. ACSF3 ENSGALG00000035225 261 0.925 - - 0.925 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
34. CCDC135 CCDC135 220 0.923 - - 0.923 - - - - - - -
35. ALKBH8 ENSGALG00000017170 699 0.922 - - 0.922 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
36. PRKCE ENSGALG00000010000 99 0.922 - - 0.922 - - - - - - - protein kinase C epsilon, transcript variant X1
37. PKD2 ENSGALG00000010921 55 0.92 - - 0.920 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
38. RAB11FIP1 41 0.918 - - 0.918 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
39. KIDINS220 ENSGALG00000016409 854 0.917 - - 0.917 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
40. NUDT4 ENSGALG00000011285 2998 0.913 - - 0.913 - - - - - - - nudix hydrolase 4, transcript variant X5
41. GABRA1 ENSGALG00000001698 120 0.912 - - 0.912 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
42. CNKSR1 ENSGALG00000046299 195 0.911 - - 0.911 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
43. MIS12 ENSGALG00000001632 372 0.91 - - 0.910 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
44. TBC1D8B ENSGALG00000009040 75 0.909 - - 0.909 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
45. FMN2 ENSGALG00000031427 77 0.906 - - 0.906 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
46. gga-mir-6561 ENSGALG00000026650 135 0.906 - - 0.906 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
47. APH1A ENSGALG00000045163 146 0.905 - - 0.905 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
48. STXBP1 ENSGALG00000040003 157 0.904 - - 0.904 - - - - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
49. ENSGALG00000011942 ENSGALG00000011942 175 0.903 - - 0.903 - - - - - - -
50. ENSGALG00000004127 ENSGALG00000004127 566 0.901 - - 0.901 - - - - - - -
51. FAM46A ENSGALG00000035903 891 0.899 - - 0.899 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
52. PLXNB2 ENSGALG00000039861 338 0.896 - - 0.896 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
53. NHLRC2 ENSGALG00000008946 387 0.896 - - 0.896 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
54. ENSGALG00000026925 ENSGALG00000026925 119 0.891 - - 0.891 - - - - - - -
55. VWDE ENSGALG00000042443 160 0.889 - - 0.889 - - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
56. RIPK4 ENSGALG00000040189 102 0.885 - - 0.885 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
57. DVL3 ENSGALG00000008414 38 0.883 - - 0.883 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
58. KLF6 ENSGALG00000033178 679 0.88 - - 0.880 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
59. C1H11ORF70 ENSGALG00000017189 395 0.879 - - 0.879 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
60. THNSL1 ENSGALG00000007677 287 0.875 - - 0.875 - - - - - - - threonine synthase like 1 [Source:HGNC Symbol;Acc:HGNC:26160]
61. PRDM10 632 0.866 - - 0.866 - - - - - - - PR domain 10, transcript variant X10
62. TEX264 ENSGALG00000003832 3053 0.862 - - 0.862 - - - - - - - testis expressed 264 [Source:NCBI gene;Acc:415938]
63. ZC4H2 ENSGALG00000042725 361 0.857 - - 0.857 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
64. WDR5 ENSGALG00000002659 13008 0.856 - - 0.856 - - - - - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
65. ABCC1 ENSGALG00000006646 2596 0.85 - - 0.850 - - - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
66. MST4 MST4 1931 0.846 - - 0.846 - - - - - - -
67. NUBPL ENSGALG00000009983 3328 0.845 - - 0.845 - - - - - - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
68. MTMR14 ENSGALG00000006601 1435 0.842 - - 0.842 - - - - - - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
69. VTI1B ENSGALG00000009526 133 0.841 - - 0.841 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
70. CPSF2 ENSGALG00000010783 5236 0.84 - - 0.840 - - - - - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
71. CNP1 ENSGALG00000028638 56 0.84 - - 0.840 - - - - - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
72. ZYG11B ENSGALG00000010643 2555 0.838 - - 0.838 - - - - - - - zyg-11 family member B, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:25820]
73. NRXN1 ENSGALG00000009107 277 0.836 - - 0.836 - - - - - - - neurexin 1 [Source:NCBI gene;Acc:395398]
74. C26H6ORF89 C26H6ORF89 1826 0.836 - - 0.836 - - - - - - -
75. HSPH1 ENSGALG00000017077 735 0.832 - - 0.832 - - - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
76. CCDC51 ENSGALG00000006465 1845 0.832 - - 0.832 - - - - - - - coiled-coil domain containing 51, transcript variant X1
77. HPS3 ENSGALG00000040089 44 0.831 - - 0.831 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
78. MMS22L ENSGALG00000015513 2089 0.83 - - 0.830 - - - - - - - MMS22 like, DNA repair protein [Source:HGNC Symbol;Acc:HGNC:21475]
79. VAMP3 ENSGALG00000000579 720 0.828 - - 0.828 - - - - - - - vesicle-associated membrane protein 3 [Source:NCBI gene;Acc:419368]
80. TRMT12 ENSGALG00000006773 707 0.826 - - 0.826 - - - - - - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
81. MKP3 MKP3 4418 0.826 - - 0.826 - - - - - - -
82. RMDN3 ENSGALG00000035242 680 0.824 - - 0.824 - - - - - - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
83. BRWD3 ENSGALG00000007151 3495 0.821 - - 0.821 - - - - - - - bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17342]
84. ANO5 ENSGALG00000003748 3959 0.82 - - 0.820 - - - - - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
85. ALG11 ENSGALG00000017022 619 0.82 - - 0.820 - - - - - - - ALG11, alpha-1,2-mannosyltransferase [Source:NCBI gene;Acc:418880]
86. ECHDC2 ENSGALG00000010647 4413 0.819 - - 0.819 - - - - - - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
87. KCNK5 ENSGALG00000034077 3233 0.816 - - 0.816 - - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
88. FGGY ENSGALG00000010879 1279 0.815 - - 0.815 - - - - - - - FGGY carbohydrate kinase domain containing [Source:HGNC Symbol;Acc:HGNC:25610]
89. ARFGEF1 ENSGALG00000034610 238 0.812 - - 0.812 - - - - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
90. DUSP1 ENSGALG00000040360 2129 0.811 - - 0.811 - - - - - - - dual specificity phosphatase 1 [Source:NCBI gene;Acc:374192]
91. TSPAN14 ENSGALG00000002414 69 0.81 - - 0.810 - - - - - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
92. CLEC3B ENSGALG00000030969 363 0.81 - - 0.810 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
93. VPS53 ENSGALG00000042071 1158 0.809 - - 0.809 - - - - - - - VPS53, GARP complex subunit [Source:NCBI gene;Acc:417622]
94. FGFR1OP2 ENSGALG00000014084 1881 0.808 - - 0.808 - - - - - - - FGFR1 oncogene partner 2 [Source:NCBI gene;Acc:418214]
95. CDH1 ENSGALG00000000608 6156 0.807 - - 0.807 - - - - - - - cadherin 3 [Source:NCBI gene;Acc:414845]
96. RCAN1 ENSGALG00000016014 95 0.806 - - 0.806 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
97. BECN1 ENSGALG00000002973 1569 0.805 - - 0.805 - - - - - - - beclin 1 [Source:NCBI gene;Acc:420018]
98. DNAJB14 ENSGALG00000014026 598 0.805 - - 0.805 - - - - - - - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
99. ZNF341 ENSGALG00000002968 1028 0.805 - - 0.805 - - - - - - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
100. NMNAT1 ENSGALG00000043318 471 0.804 - - 0.804 - - - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:17877]

There are 129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA