Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN3B

Gene Name Gene ID Reads Annotation
SCN3B ENSGALG00000006490 48 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]











Genes with expression patterns similar to SCN3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCN3B ENSGALG00000006490 48 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
2. SIX4 ENSGALG00000017389 10 1 - - - - - - 1.000 - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
3. EPB42 ENSGALG00000021230 20 1 - - - - - - 1.000 - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
4. CFAP99 ENSGALG00000015685 32 1 - - - - - - 1.000 - - - cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
5. SHROOM3 35 1 - - - - - - 1.000 - - - shroom family member 3, transcript variant X1
6. SCN1A ENSGALG00000010943 6 1 - - - - - - 1.000 - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
7. PAX5 ENSGALG00000016431 1 1 - - - - - - 1.000 - - - paired box 5 [Source:NCBI gene;Acc:387330]
8. WNK1 ENSGALG00000012992 67 1 - - - - - - 1.000 - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
9. CARF ENSGALG00000008474 6 1 - - - - - - 1.000 - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
10. C9orf3 C9orf3 47 1 - - - - - - 1.000 - - -
11. SLC5A7 ENSGALG00000016804 93 1 - - - - - - 1.000 - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
12. SLC26A4 ENSGALG00000007998 2 1 - - - - - - 1.000 - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
13. SEPT12 ENSGALG00000029027 611 1 - - - - - - 1.000 - - - septin 12 [Source:HGNC Symbol;Acc:HGNC:26348]
14. ZNF143 ENSGALG00000005787 345 1 - - - - - - 1.000 - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
15. ASMT ENSGALG00000016685 3 1 - - - - - - 1.000 - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
16. GTF3C6 ENSGALG00000015044 112 1 - - - - - - 1.000 - - - general transcription factor IIIC subunit 6 [Source:NCBI gene;Acc:421754]
17. ARSA ENSGALG00000035824 299 1 - - - - - - 1.000 - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
18. GHSR ENSGALG00000027947 24 1 - - - - - - 1.000 - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
19. SEMA4G ENSGALG00000026957 11 1 - - - - - - 1.000 - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
20. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - - - - 1.000 - - -
21. DNAJC28 ENSGALG00000037414 6 1 - - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
22. RASAL2 ENSGALG00000004323 55 1 - - - - - - 1.000 - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
23. HECA ENSGALG00000013824 14 1 - - - - - - 1.000 - - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
24. RASA4 ENSGALG00000001876 178 1 - - - - - - 1.000 - - - RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
25. WWTR1 ENSGALG00000010412 5 1 - - - - - - 1.000 - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
26. VENTX VENTX 50 1 - - - - - - 1.000 - - -
27. TYRP1 ENSGALG00000015205 4 1 - - - - - - 1.000 - - - tyrosinase related protein 1 [Source:NCBI gene;Acc:395913]
28. UBXN6 ENSGALG00000001146 122 1 - - - - - - 1.000 - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
29. CNP1 ENSGALG00000028638 56 1 - - - - - - 1.000 - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
30. OLAH ENSGALG00000043833 3 1 - - - - - - 1.000 - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
31. LMLN ENSGALG00000012067 15 1 - - - - - - 1.000 - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
32. ENSGALG00000028222 ENSGALG00000028222 44 1 - - - - - - 1.000 - - -
33. EIF4ENIF1 ENSGALG00000006898 24 0.97 - - - - - - - 0.970 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
34. SLC25A29 ENSGALG00000011220 17 0.97 - - - - - - - 0.970 - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
35. ENSGALG00000022857 ENSGALG00000022857 4 0.969 - - - - - - - 0.969 - -
36. CCDC152 CCDC152 28 0.969 - - - - - - - 0.969 - -
37. NKD1 ENSGALG00000003767 76 0.969 - - - - - - - 0.969 - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
38. UNC45A ENSGALG00000029714 158 0.969 - - - - - - - 0.969 - - unc-45 myosin chaperone A [Source:HGNC Symbol;Acc:HGNC:30594]
39. SPP1 ENSGALG00000010926 8 0.969 - - - - - - - 0.969 - - secreted phosphoprotein 1 [Source:NCBI gene;Acc:395210]
40. BRSK2 ENSGALG00000006681 158 0.969 - - - - - - - 0.969 - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
41. YAE1D1 23 0.969 - - - - - - - 0.969 - - Yae1 domain containing 1, transcript variant X2
42. GABARAPL3 GABARAPL3 32 0.969 - - - - - - - 0.969 - -
43. ENSGALG00000005543 ENSGALG00000005543 2 0.969 - - - - - - - 0.969 - -
44. MGMT ENSGALG00000042949 53 0.969 - - - - - - - 0.969 - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
45. TRIM2 ENSGALG00000009207 44 0.969 - - - - - - - 0.969 - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
46. ENSGALG00000005511 ENSGALG00000005511 7 0.969 - - - - - - - 0.969 - -
47. ATP7B ENSGALG00000017021 7 0.969 - - - - - - - 0.969 - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
48. ENSGALG00000011516 ENSGALG00000011516 24 0.964 - - - - - - - 0.964 - -
49. ELOVL2 ENSGALG00000012748 97 0.964 - - - - - - - 0.964 - - ELOVL fatty acid elongase 2 [Source:NCBI gene;Acc:420858]
50. CXorf30 CXorf30 172 0.956 - - - - - - - 0.956 - -
51. LHX2 ENSGALG00000001124 18 0.956 - - - - - - - 0.956 - - LIM homeobox 2 [Source:NCBI gene;Acc:395705]
52. CASR ENSGALG00000038405 53 0.954 - - - - - - - 0.954 - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
53. HPS3 ENSGALG00000040089 44 0.949 - - - - - - - 0.949 - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
54. FAM122B ENSGALG00000006108 16 0.949 - - - - - - - 0.949 - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
55. CBS ENSGALG00000016196 8 0.942 - - - - - - - 0.942 - - cystathionine-beta-synthase, transcript variant X3
56. CLMN ENSGALG00000030719 60 0.937 - - - - - - - 0.937 - - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
57. PIK3R2 ENSGALG00000003428 205 0.934 - - - - - - - 0.934 - - phosphoinositide-3-kinase regulatory subunit 2
58. CC2D1B ENSGALG00000010619 66 0.934 - - - - - - - 0.934 - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
59. CX3CL1 ENSGALG00000026663 218 0.932 - - - - - - - 0.932 - - C-X3-C motif chemokine ligand 1 [Source:NCBI gene;Acc:415651]
60. C1orf170 C1orf170 7 0.929 - - - - - - 0.929 - - -
61. ABRA ENSGALG00000041043 16 0.928 - - - - - - - 0.928 - - actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
62. PPP2R5E ENSGALG00000011840 176 0.927 - - - - - - - 0.927 - - protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
63. PCLO 249 0.923 - - - - - - - 0.923 - - piccolo presynaptic cytomatrix protein
64. LRRC52 ENSGALG00000003443 20 0.92 - - - - - - - 0.920 - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
65. TNFRSF19 ENSGALG00000017119 25 0.917 - - - - - - - 0.917 - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
66. COBLL1 ENSGALG00000011068 111 0.915 - - - - - - - 0.915 - - cordon-bleu WH2 repeat protein like 1 [Source:HGNC Symbol;Acc:HGNC:23571]
67. NMRK1 ENSGALG00000015156 88 0.905 - - - - - - - 0.905 - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
68. CNOT4 ENSGALG00000011682 116 0.897 - - - - - - - 0.897 - - CCR4-NOT transcription complex subunit 4 [Source:NCBI gene;Acc:417936]
69. SLC29A4 ENSGALG00000010497 43 0.893 - - - - - - - 0.893 - - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
70. PDE7B ENSGALG00000013941 49 0.893 - - - - - - - 0.893 - - phosphodiesterase 7B [Source:HGNC Symbol;Acc:HGNC:8792]
71. SAMD15 ENSGALG00000010457 69 0.889 - - - - - - - 0.889 - - sterile alpha motif domain containing 15
72. SYNRG ENSGALG00000005468 27 0.888 - - - - - - - 0.888 - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
73. GOS2 GOS2 116 0.877 - - - - - - - 0.877 - -
74. C17orf62 C17orf62 37 0.871 - - - - - - - 0.871 - -
75. RMDN3 ENSGALG00000035242 680 0.867 - - - - - - - 0.867 - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
76. LAMB2 ENSGALG00000006802 325 0.862 - - - - - - - 0.862 - - laminin, beta 2 (laminin S) [Source:NCBI gene;Acc:373980]
77. POMT1 ENSGALG00000003757 38 0.848 - - - - - - - 0.848 - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
78. TRPS1 ENSGALG00000031700 39 0.843 - - - - - - - 0.843 - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
79. ENSGALG00000019198 ENSGALG00000019198 488 0.842 - - - - - - 0.842 - - -
80. CEP170B ENSGALG00000011639 71 0.842 - - - - - - 0.842 - - - centrosomal protein 170B, transcript variant X13
81. HKDC1 ENSGALG00000021039 134 0.842 - - - - - - 0.842 - - - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
82. CDKN2AIP ENSGALG00000010661 1218 0.829 - - - - - - - 0.829 - - CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
83. PTH ENSGALG00000042878 40 0.828 - - 0.828 - - - - - - - parathyroid hormone [Source:NCBI gene;Acc:396436]
84. MYL3 ENSGALG00000005448 3379 0.82 - - - - - - - 0.820 - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
85. CPLX1 ENSGALG00000015332 55 0.818 - - - - - - 0.818 - - - complexin 1 [Source:HGNC Symbol;Acc:HGNC:2309]
86. FSD1L ENSGALG00000015442 106 0.813 - - - - - - 0.813 - - - fibronectin type III and SPRY domain containing 1 like [Source:HGNC Symbol;Acc:HGNC:13753]
87. MTMR14 ENSGALG00000006601 1435 0.8 - - - - - - - 0.800 - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
88. RBM33 ENSGALG00000006372 95 0.8 - - - - - - - 0.800 - - RNA binding motif protein 33 [Source:HGNC Symbol;Acc:HGNC:27223]
89. CDR2 ENSGALG00000025743 145 0.799 - - - - - - - 0.799 - - cerebellar degeneration related protein 2 [Source:NCBI gene;Acc:416621]
90. IPP ENSGALG00000010287 2 0.794 - - 0.794 - - - - - - - intracisternal A particle-promoted polypeptide [Source:HGNC Symbol;Acc:HGNC:6108]
91. PCYT1B 190 0.789 - - - - - - - 0.789 - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
92. MLLT3 ENSGALG00000015078 502 0.788 - - - - - - - 0.788 - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
93. CRDS2 CRDS2 22 0.779 - - - - - - - 0.779 - -
94. ASXL1 ENSGALG00000006612 273 0.779 - - - - - - 0.779 - - - ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
95. ZFAND3 ENSGALG00000010134 34 0.776 - - 0.776 - - - - - - - zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]
96. PLAGL1 ENSGALG00000013754 45 0.775 - - - - - - 0.775 - - - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
97. LRRC32 9 0.771 - - 0.771 - - - - - - - leucine rich repeat containing 32
98. BRPF1 ENSGALG00000033529 692 0.769 - - - - - - - 0.769 - - bromodomain and PHD finger containing 1 [Source:NCBI gene;Acc:427590]
99. SLC35D3 ENSGALG00000030545 55 0.765 - - - - - - - - - 0.765 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
100. SIGIRR ENSGALG00000004267 72 0.759 - - - - - - - 0.759 - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]

There are 81 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA