Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCMH1

Gene Name Gene ID Reads Annotation
SCMH1 ENSGALG00000000672 3 Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]











Genes with expression patterns similar to SCMH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCMH1 ENSGALG00000000672 3 4 - - 1.000 1.000 - 1.000 - - - 1.000 Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]
2. CDO1 ENSGALG00000002358 74 2 - - 1.000 - - 1.000 - - - - cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]
3. B3GALNT1 1 2 - - 1.000 - - - - - - 1.000 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), transcript variant X14
4. MTMR11 ENSGALG00000035923 1 2 - - - - - 1.000 - - - 1.000 myotubularin related protein 11 [Source:HGNC Symbol;Acc:HGNC:24307]
5. SYNJ1 ENSGALG00000034317 7 1.925 - - - 0.925 - 1.000 - - - - synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]
6. ENSGALG00000009209 ENSGALG00000009209 6 1.766 - - 1.000 - - 0.766 - - - -
7. CTRB2 ENSGALG00000000038 6 1.706 - - 0.706 - - - - - - 1.000 chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
8. ENSGALG00000014620 ENSGALG00000014620 7 1.505 - - - - - 0.751 - - - 0.754
9. LMOD2 ENSGALG00000008805 113 1 - - - - - 1.000 - - - - leiomodin 2 [Source:NCBI gene;Acc:417751]
10. EXOC6B ENSGALG00000016098 3 1 - - - - - 1.000 - - - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
11. SYTL2L ENSGALG00000008326 5 1 - - - - - 1.000 - - - - synaptotagmin-like protein 2-like, transcript variant X4
12. PCSK1 ENSGALG00000014681 73 1 - - - 1.000 - - - - - - proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
13. ZC2HC1B 15 1 - - - - - 1.000 - - - - zinc finger C2HC-type containing 1B
14. SLC26A9 ENSGALG00000000745 1 1 - - - - - 1.000 - - - - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
15. ASB18 ENSGALG00000046564 7 1 - - - - - 1.000 - - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
16. ENSGALG00000023100 ENSGALG00000023100 12 1 - - 1.000 - - - - - - -
17. SNORD98 SNORD98 1 1 - - - - - - - - - 1.000
18. SPEG ENSGALG00000043198 2 1 - - - - - - - - - 1.000 SPEG complex locus, transcript variant X12
19. ADAM5P ENSGALG00000009606 31 1 - - 1.000 - - - - - - - ADAM metallopeptidase domain 5, pseudogene, transcript variant X5
20. GUCA1C ENSGALG00000015364 1 1 - - 1.000 - - - - - - - guanylate cyclase activator 1C [Source:HGNC Symbol;Acc:HGNC:4680]
21. MTMR3 ENSGALG00000008051 9 1 - - - - - - - - - 1.000 myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
22. MEP1A ENSGALG00000033033 2 1 - - - - - 1.000 - - - - meprin A subunit alpha [Source:NCBI gene;Acc:422060]
23. DOK6 ENSGALG00000013753 2 1 - - 1.000 - - - - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
24. ZFYVE21 ENSGALG00000011534 7 1 - - - - - - - - - 1.000 zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
25. ABHD2 ENSGALG00000006689 29 1 - - - - - 1.000 - - - - abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
26. SEMA4G ENSGALG00000026957 11 1 - - - 1.000 - - - - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
27. RASGEF1C ENSGALG00000006076 1 1 - - - - - - - - - 1.000 RasGEF domain family member 1C [Source:NCBI gene;Acc:416296]
28. ENSGALG00000015429 ENSGALG00000015429 34 1 - - - - - 1.000 - - - -
29. DNER ENSGALG00000002958 3 1 - - - - - 1.000 - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
30. ITPRIP ENSGALG00000025780 4 1 - - - 1.000 - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:29370]
31. ENSGALG00000026769 ENSGALG00000026769 1 1 - - 1.000 - - - - - - -
32. DD1 DD1 4 1 - - - - - - - - - 1.000
33. MYH13 4 1 - - - 1.000 - - - - - - myosin, heavy chain 13, skeletal muscle
34. AVP ENSGALG00000014117 19 1 - - - - - 1.000 - - - - arginine vasopressin [Source:NCBI gene;Acc:396101]
35. FEM1A ENSGALG00000004168 14 1 - - - - - 1.000 - - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
36. ENSGALG00000001004 ENSGALG00000001004 17 1 - - - - - 1.000 - - - -
37. DSCAM ENSGALG00000016138 16 1 - - - - - 1.000 - - - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
38. SNORD95 SNORD95 6 1 - - - - - 1.000 - - - -
39. MUSK ENSGALG00000015728 7 1 - - - - - - - - - 1.000 muscle associated receptor tyrosine kinase [Source:NCBI gene;Acc:373897]
40. SNX19 ENSGALG00000001425 2 1 - - - - - - - - - 1.000 sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
41. SLC10A2 ENSGALG00000016858 4 1 - - - - - 1.000 - - - - Gallus gallus solute carrier family 10 member 2 (SLC10A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319027]
42. CTLA4 ENSGALG00000008666 5 1 - - - - - - - - - 1.000 cytotoxic T-lymphocyte associated protein 4 [Source:NCBI gene;Acc:424106]
43. ILDR2 ENSGALG00000015458 16 1 - - - - - 1.000 - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
44. DRD5 ENSGALG00000014975 1 1 - - - - - 1.000 - - - - dopamine receptor D5 [Source:HGNC Symbol;Acc:HGNC:3026]
45. ABCC8 ENSGALG00000006172 41 1 - - - - - 1.000 - - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
46. CREB3L3 ENSGALG00000001252 1 1 - - - - - - - - - 1.000 cAMP responsive element binding protein 3 like 3 [Source:HGNC Symbol;Acc:HGNC:18855]
47. PFN4 ENSGALG00000019866 53 1 - - 1.000 - - - - - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
48. CDC42EP1 ENSGALG00000038556 3 1 - - 1.000 - - - - - - - CDC42 effector protein 1 [Source:HGNC Symbol;Acc:HGNC:17014]
49. ENSGALG00000013327 ENSGALG00000013327 16 1 - - - - - 1.000 - - - -
50. WDR86 ENSGALG00000019690 113 1 - - - - - 1.000 - - - - WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]
51. FAM46D 22 1 - - - - - 1.000 - - - - family with sequence similarity 46 member D
52. SLC16A3 ENSGALG00000002728 323 1 - - - - - 1.000 - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
53. USP19 ENSGALG00000006824 44 1 - - - - - 1.000 - - - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
54. IRG1 IRG1 21 1 - - 1.000 - - - - - - -
55. EAF1 ENSGALG00000033379 3 1 - - 1.000 - - - - - - - ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
56. TMEM184B ENSGALG00000012272 1 1 - - 1.000 - - - - - - - transmembrane protein 184B [Source:NCBI gene;Acc:418027]
57. AUTS2 ENSGALG00000001153 24 1 - - - - - 1.000 - - - - AUTS2, activator of transcription and developmental regulator [Source:HGNC Symbol;Acc:HGNC:14262]
58. LDLRAD3 ENSGALG00000038913 4 1 - - - 1.000 - - - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
59. NR3C1 ENSGALG00000032992 4 1 - - - - - - - - - 1.000 nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
60. AK8 ENSGALG00000040923 10 1 - - 1.000 - - - - - - - adenylate kinase 8, transcript variant X1
61. IL19 ENSGALG00000000911 1 1 - - - - - 1.000 - - - - interleukin 19 [Source:HGNC Symbol;Acc:HGNC:5990]
62. MFSD4 MFSD4 1 1 - - - - - - - - - 1.000
63. KLC4 ENSGALG00000030384 154 1 - - - 1.000 - - - - - - kinesin light chain 4, transcript variant X5
64. AGTR2 ENSGALG00000005936 3 1 - - - - - - - - - 1.000 angiotensin II receptor type 2 [Source:HGNC Symbol;Acc:HGNC:338]
65. RBP3 ENSGALG00000005978 1 1 - - - - - - - - - 1.000 retinol binding protein 3 [Source:NCBI gene;Acc:395553]
66. LAD1 ENSGALG00000000309 2 1 - - - - - 1.000 - - - - ladinin 1 [Source:HGNC Symbol;Acc:HGNC:6472]
67. SRRL ENSGALG00000002638 26 1 - - - - - 1.000 - - - - serine racemase-like, transcript variant X8
68. TEKT3 ENSGALG00000001348 13 1 - - - - - - - - - 1.000 tektin 3 [Source:HGNC Symbol;Acc:HGNC:14293]
69. NR0B2 ENSGALG00000000887 2 1 - - - - - - - - - 1.000 nuclear receptor subfamily 0 group B member 2 [Source:NCBI gene;Acc:768353]
70. TRIM41 ENSGALG00000030569 5 1 - - - - - 1.000 - - - - tripartite motif containing 41 [Source:NCBI gene;Acc:417043]
71. CPNE4 ENSGALG00000029235 32 1 - - - - - 1.000 - - - - copine 4 [Source:HGNC Symbol;Acc:HGNC:2317]
72. CDK5R2 ENSGALG00000025729 1 1 - - - - - - - - - 1.000 cyclin dependent kinase 5 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:1776]
73. WDR16 WDR16 22 1 - - 1.000 - - - - - - -
74. SCN5A ENSGALG00000006112 137 1 - - - - - 1.000 - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
75. DRG11 DRG11 32 1 - - - - - 1.000 - - - -
76. ENSGALG00000009151 ENSGALG00000009151 6 1 - - - - - 1.000 - - - -
77. SNORA35 SNORA35 0 1 - - - - - 1.000 - - - -
78. SOCS1B SOCS1B 1 1 - - 1.000 - - - - - - -
79. ENSGALG00000027704 ENSGALG00000027704 2 1 - - - - - - - - - 1.000
80. ADAMTS8 ENSGALG00000001370 0 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
81. ENSGALG00000016493 ENSGALG00000016493 2 1 - - - - - 1.000 - - - -
82. ATP6V1A ENSGALG00000014800 4 1 - - - - - - - - - 1.000 ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
83. GPRIN2 ENSGALG00000002048 17 1 - - - - - - - - - 1.000 G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
84. ENSGALG00000023054 ENSGALG00000023054 1 1 - - - - - - - - - 1.000
85. PAH ENSGALG00000012754 15 1 - - - - - 1.000 - - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
86. B9D1 ENSGALG00000005096 760 1 - - - - - - - - - 1.000 B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
87. ENSGALG00000028269 ENSGALG00000028269 1 1 - - - - - - - - - 1.000
88. ENSGALG00000026657 ENSGALG00000026657 4 1 - - - - - 1.000 - - - -
89. PLA2G5 ENSGALG00000018977 0 1 - - - - - 1.000 - - - - phospholipase A2 group V [Source:NCBI gene;Acc:771655]
90. TRPS1 ENSGALG00000031700 39 1 - - - - - 1.000 - - - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
91. GRM8 ENSGALG00000039403 17 1 - - - - - 1.000 - - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
92. TNN ENSGALG00000004538 21 1 - - - - - 1.000 - - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
93. Sep-04 Sep-04 1 1 - - 1.000 - - - - - - -
94. NLGN3 ENSGALG00000005553 4 1 - - 1.000 - - - - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
95. SLC6A17 ENSGALG00000000394 10 1 - - - - - 1.000 - - - - solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
96. PPP1R9A 4 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 9A, transcript variant X6
97. LRRC39 ENSGALG00000005284 5 1 - - 1.000 - - - - - - - leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
98. AQP12 AQP12 11 1 - - - - - 1.000 - - - -
99. MID2 ENSGALG00000003860 3 1 - - - 1.000 - - - - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
100. CD5 ENSGALG00000031735 3 1 - - 1.000 - - - - - - - CD5 molecule [Source:NCBI gene;Acc:395757]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA