Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SAFB2

Gene Name Gene ID Reads Annotation
SAFB2 ENSGALG00000001948 10238 scaffold attachment factor B2, transcript variant X6











Genes with expression patterns similar to SAFB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SAFB2 ENSGALG00000001948 10238 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scaffold attachment factor B2, transcript variant X6
2. gga-mir-6596 ENSGALG00000026117 2893 2.242 - - - - 0.723 - 0.730 0.789 - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
3. CTCF 10811 1.722 - - - - - - 0.810 0.912 - - CCCTC-binding factor, transcript variant X2
4. BLOC1S5 ENSGALG00000012782 5885 1.703 - - - - - - 0.829 0.874 - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
5. SAR1B ENSGALG00000038753 6493 1.609 - - - - - - 0.830 0.779 - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
6. ENSGALG00000017324 ENSGALG00000017324 8235 1.566 - - - - - - 0.798 0.768 - -
7. TMEM185A ENSGALG00000009139 4424 1.561 - - - - - - 0.753 0.808 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
8. PCNP ENSGALG00000015330 15750 1.542 - - - - 0.804 - 0.738 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
9. DNAJC3 ENSGALG00000016894 9048 1.533 - - - - - - 0.705 0.828 - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
10. CASK ENSGALG00000042400 8485 1.531 - - - - 0.749 - 0.782 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
11. MADH2 MADH2 13017 1.53 - - - - - - 0.723 0.807 - -
12. STX16 ENSGALG00000007541 6458 1.528 - - - - - - 0.752 0.776 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
13. CHTF8 ENSGALG00000000632 7230 1.527 - - - - - - 0.713 0.814 - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
14. RIOK3 ENSGALG00000015004 4249 1.526 - - - - 0.754 - 0.772 - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
15. RFC5 ENSGALG00000026517 26113 1.518 - - - - 0.704 - 0.814 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
16. RPS6KA RPS6KA 6745 1.508 - - - - - - 0.750 0.758 - -
17. RHPN2 ENSGALG00000004814 1865 1.505 - - - - - - 0.728 0.777 - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
18. FBXW5 ENSGALG00000030831 5927 1.505 - - - - - - 0.712 0.793 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
19. DGCR2 ENSGALG00000005891 8405 1.501 - - - - 0.702 - 0.799 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
20. CTBP1 ENSGALG00000039942 9383 1.499 - - - - 0.709 - 0.790 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
21. TBC1D22A ENSGALG00000043058 1614 1.497 - - - - 0.753 - 0.744 - - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
22. C1orf50 ENSGALG00000004800 4894 1.489 - - - - 0.718 - - 0.771 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
23. SKAP2 ENSGALG00000030081 13746 1.485 - - - - 0.751 - 0.734 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
24. ZMYM3 ENSGALG00000005533 2927 1.478 - - - - - - 0.732 0.746 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
25. CBLL1 ENSGALG00000038981 6725 1.472 - - - - 0.710 - 0.762 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
26. GTF3C1 ENSGALG00000007387 5788 1.469 - - - - 0.739 - 0.730 - - - general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
27. AHSA1 ENSGALG00000010463 15252 1.468 - - - - 0.714 - 0.754 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
28. ARPC1A ENSGALG00000004693 11583 1.461 - - - - 0.742 - 0.719 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
29. OFD1 ENSGALG00000016576 1916 1.461 - - - - 0.742 - - 0.719 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
30. TMEM194B TMEM194B 3815 1.448 - - 0.708 - - - 0.740 - - -
31. THAP5 ENSGALG00000009494 6540 1.443 - - - - 0.731 - 0.712 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
32. RRP9 ENSGALG00000043359 9747 1.442 - - - - - 0.730 0.712 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
33. GNPAT ENSGALG00000011163 4286 1.417 - - - - - - 0.701 0.716 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
34. MAD2L1 ENSGALG00000011967 16125 0.889 - - - - - - - 0.889 - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
35. C1QBP ENSGALG00000001654 34814 0.88 - - - - - - 0.880 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
36. TMEM123 ENSGALG00000017185 6798 0.879 - - - - - - - 0.879 - - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
37. SMC4 ENSGALG00000009553 15715 0.865 - - - - - - 0.865 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
38. NUPL1 NUPL1 8197 0.863 - - - - - - 0.863 - - -
39. ZNF598 ENSGALG00000005598 8270 0.863 - - - - - - - 0.863 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
40. PTK2 ENSGALG00000031741 13103 0.863 - - - - - - 0.863 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
41. POLR1C ENSGALG00000010349 7059 0.86 - - - - - - - 0.860 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
42. JUP ENSGALG00000017414 6920 0.856 - - - - - - - 0.856 - - junction plakoglobin [Source:NCBI gene;Acc:429710]
43. MAP3K7 ENSGALG00000015596 15164 0.856 - - - - - - 0.856 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
44. TTYH2 ENSGALG00000026940 15628 0.855 - - - - - - 0.855 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
45. CNEP1R1 ENSGALG00000029793 6536 0.854 - - - - - - - 0.854 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
46. AP3D1 ENSGALG00000000996 16143 0.853 - - - - - - - 0.853 - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
47. FAM177A1 ENSGALG00000010046 4318 0.853 - - - - - - 0.853 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
48. PEPD ENSGALG00000004899 9785 0.851 - - - - - - - 0.851 - - peptidase D [Source:NCBI gene;Acc:415776]
49. SAP130 ENSGALG00000002070 9814 0.847 - - - - - - - 0.847 - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
50. FAM206A ENSGALG00000019524 7170 0.846 - - - - - - - 0.846 - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
51. PSMC3 ENSGALG00000008108 22922 0.845 - - - - - - 0.845 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
52. ENSGALG00000014375 ENSGALG00000014375 4741 0.843 - - - - - - - 0.843 - -
53. GPC4 ENSGALG00000006080 56498 0.839 - - - - - - 0.839 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
54. SRP19 ENSGALG00000000218 14207 0.838 - - - - - - - 0.838 - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
55. TMA16 ENSGALG00000009501 6651 0.838 - - - - - - - 0.838 - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
56. NUP50 ENSGALG00000014222 11743 0.838 - - - - - - 0.838 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
57. AP2A2 ENSGALG00000006799 13874 0.836 - - - - - - 0.836 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
58. YWHAZ ENSGALG00000031387 84985 0.834 - - - - - - 0.834 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
59. MRPL39 ENSGALG00000015742 7025 0.834 - - - - - - - 0.834 - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
60. ACTN1 ENSGALG00000042458 10477 0.833 - - - - - - 0.833 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
61. IGBP1 ENSGALG00000044628 9200 0.833 - - - - - - 0.833 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
62. HEY1 ENSGALG00000035031 8795 0.831 - - - - - - - 0.831 - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
63. MESDC2 MESDC2 11010 0.83 - - - - - - - 0.830 - -
64. GOLPH3 ENSGALG00000028267 9692 0.83 - - - - - - - 0.830 - - golgi phosphoprotein 3, transcript variant X1
65. ATAD2 ENSGALG00000034348 4440 0.83 - - - - - - - 0.830 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
66. CHCHD6 ENSGALG00000006056 6121 0.83 - - - - - - - 0.830 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
67. TMEM184C ENSGALG00000010019 7856 0.83 - - - - - - 0.830 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
68. GABARAPL2 ENSGALG00000003208 9195 0.829 - - - - - - 0.829 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
69. C4H4ORF52 C4H4ORF52 8116 0.829 - - - - - - 0.829 - - -
70. NEK6 ENSGALG00000001118 20333 0.827 - - - - - - 0.827 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
71. UBE2D1 ENSGALG00000021213 5876 0.827 - - - - - - 0.827 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
72. SERINC1 ENSGALG00000014868 12484 0.826 - - - - - - - 0.826 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
73. AKAP1 ENSGALG00000005575 12051 0.826 - - - - - - 0.826 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
74. FZD2 ENSGALG00000030847 3286 0.825 - - - - - - 0.825 - - - frizzled class receptor 2 [Source:NCBI gene;Acc:374061]
75. HAUS6 ENSGALG00000015091 9671 0.825 - - - - - - - 0.825 - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
76. NASP ENSGALG00000010255 28423 0.824 - - - - - - 0.824 - - - nuclear autoantigenic sperm protein, transcript variant X3
77. TIMM8A ENSGALG00000004963 14263 0.824 - - - - - - 0.824 - - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
78. HSPA4 ENSGALG00000040882 20966 0.824 - - - - - - 0.824 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
79. LACTB2 ENSGALG00000038745 3460 0.822 - - - - - - - 0.822 - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
80. RBBP4 ENSGALG00000003522 72455 0.821 - - - - - - 0.821 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
81. CLNS1A ENSGALG00000008574 25675 0.821 - - - - - - 0.821 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
82. PPP1CB ENSGALG00000010026 6909 0.82 - - - - - - - 0.820 - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
83. EIF2B1 ENSGALG00000003259 9491 0.819 - - - - - - 0.819 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
84. TTC37 ENSGALG00000014670 5715 0.819 - - - - - - 0.819 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
85. CDC45 ENSGALG00000001616 8432 0.819 - - - - - - 0.819 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
86. RNF130 ENSGALG00000005820 13797 0.819 - - - - - - - 0.819 - - ring finger protein 130 [Source:HGNC Symbol;Acc:HGNC:18280]
87. FAM63A 8470 0.818 - - - - - - - 0.818 - - family with sequence similarity 63 member A, transcript variant X2
88. MLST8 ENSGALG00000005878 8116 0.818 - - - - - - 0.818 - - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
89. SALL4 ENSGALG00000041365 6760 0.817 - - - - - - 0.817 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
90. ZNHIT3 ENSGALG00000026031 8652 0.817 - - - - - - 0.817 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
91. FBXO3 ENSGALG00000034029 15089 0.816 - - - - - - 0.816 - - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
92. UFSP2 ENSGALG00000010601 5809 0.816 - - - - - - - 0.816 - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
93. ACTR2 ENSGALG00000008779 17812 0.815 - - - - - - 0.815 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
94. ILF2 ENSGALG00000011570 23050 0.815 - - - - - - 0.815 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
95. CRLS1 ENSGALG00000009214 8652 0.815 - - - - - - 0.815 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
96. AN1ZNF5L ENSGALG00000014589 21148 0.815 - - - - - - 0.815 - - - AN1-type zinc finger protein 5-like, transcript variant X2
97. XRN2 ENSGALG00000008372 22164 0.814 - - - - - - 0.814 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
98. CCDC12 ENSGALG00000005487 8190 0.814 - - - - - - 0.814 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
99. NDUFAB1 ENSGALG00000006073 40467 0.814 - - - - - - 0.814 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
100. TNNC1 ENSGALG00000001459 7110 0.814 - - - - - - - 0.814 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]

There are 735 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA