Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPA3-AS1

Gene Name Gene ID Reads Annotation
RPA3-AS1 RPA3-AS1 2











Genes with expression patterns similar to RPA3-AS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPA3-AS1 RPA3-AS1 2 3 - - 1.000 - - - 1.000 1.000 - -
2. TROVE2 ENSGALG00000002504 14 1.812 - - - - - - 1.000 0.812 - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
3. TIAM1 ENSGALG00000015842 17 1.812 - - - - - - 1.000 0.812 - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
4. LINS LINS 18 1.794 - - 1.000 - - - 0.794 - - -
5. DMRTB1 ENSGALG00000029023 35 1 - - - - - - 1.000 - - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
6. CASZ1 ENSGALG00000002888 2 1 - - 1.000 - - - - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
7. TIGD3 TIGD3 36 1 - - - - - - 1.000 - - -
8. SNORD12 SNORD12 1 1 - - 1.000 - - - - - - -
9. GDAP1L1 ENSGALG00000004309 47 1 - - - - - - 1.000 - - - ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
10. TPH1 ENSGALG00000006236 21 1 - - 1.000 - - - - - - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
11. DOCK9 ENSGALG00000016883 128 1 - - - - - - 1.000 - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
12. ANKRD44 ENSGALG00000007996 17 1 - - - - - - 1.000 - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
13. CNP1 ENSGALG00000028638 56 1 - - - - - - - 1.000 - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
14. GP5 ENSGALG00000045125 3 1 - - 1.000 - - - - - - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
15. FGF22 ENSGALG00000041822 37 1 - - - - - - 1.000 - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
16. BDKRB2 ENSGALG00000011080 12 1 - - - - - - 1.000 - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
17. OTOP3 ENSGALG00000028214 1 1 - - - - - - 1.000 - - - otopetrin 3 [Source:HGNC Symbol;Acc:HGNC:19658]
18. ANO2 ENSGALG00000017271 4 1 - - - - - - 1.000 - - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
19. BRS3.5 BRS3.5 0 1 - - 1.000 - - - - - - -
20. ENSGALG00000022155 ENSGALG00000022155 80 1 - - - - - - 1.000 - - -
21. APOAIV APOAIV 5 1 - - 1.000 - - - - - - -
22. ENSGALG00000024286 ENSGALG00000024286 2 1 - - - - - - 1.000 - - -
23. DIS3L2 ENSGALG00000007767 35 1 - - - - - - - 1.000 - - DIS3 like 3'-5' exoribonuclease 2 [Source:HGNC Symbol;Acc:HGNC:28648]
24. PLEKHN1 ENSGALG00000002121 0 1 - - 1.000 - - - - - - - pleckstrin homology domain containing N1 [Source:HGNC Symbol;Acc:HGNC:25284]
25. B4GALT2 ENSGALG00000010094 36 1 - - - - - - 1.000 - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
26. KCNJ15 ENSGALG00000016055 66 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
27. SNORA4 SNORA4 12 1 - - - - - - 1.000 - - -
28. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - 1.000 - - -
29. CNTF ENSGALG00000026207 47 1 - - - - - - - 1.000 - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
30. MAPK13 ENSGALG00000030966 1 1 - - - - - - 1.000 - - - mitogen-activated protein kinase 13 [Source:HGNC Symbol;Acc:HGNC:6875]
31. RNF165 ENSGALG00000031018 4 1 - - - - - - 1.000 - - - ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
32. INADL INADL 51 1 - - - - - - 1.000 - - -
33. ENSGALG00000013985 ENSGALG00000013985 11 1 - - - - - - 1.000 - - -
34. ANXA13 ENSGALG00000036418 5 1 - - 1.000 - - - - - - - annexin A13 [Source:NCBI gene;Acc:420342]
35. PPM1H ENSGALG00000009805 3 1 - - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
36. NOX3 ENSGALG00000013659 4 1 - - 1.000 - - - - - - - NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
37. PDX1 ENSGALG00000038454 1 1 - - 1.000 - - - - - - - pancreatic and duodenal homeobox 1
38. CLCA1 ENSGALG00000006322 5 1 - - - - - - 1.000 - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
39. CYP17A1 ENSGALG00000008121 227 1 - - - - - - - 1.000 - - cytochrome P450 family 17 subfamily A member 1 [Source:NCBI gene;Acc:425056]
40. AMHR2 ENSGALG00000012055 55 1 - - - - - - 1.000 - - - anti-Mullerian hormone receptor, type II, transcript variant X1
41. DNER ENSGALG00000002958 3 1 - - 1.000 - - - - - - - delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
42. MFHAS1 ENSGALG00000011444 7 1 - - - - - - 1.000 - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
43. ENSGALG00000020349 ENSGALG00000020349 10 1 - - - - - - 1.000 - - -
44. SRR ENSGALG00000003155 93 1 - - - - - - 1.000 - - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
45. CHB1 CHB1 0 1 - - 1.000 - - - - - - -
46. CLPS ENSGALG00000034934 2 1 - - 1.000 - - - - - - - colipase [Source:NCBI gene;Acc:771102]
47. PRG4 3 1 - - - - - - 1.000 - - - proteoglycan 4
48. gga-mir-130b ENSGALG00000030434 125 1 - - 1.000 - - - - - - - gga-mir-130b [Source:miRBase;Acc:MI0001239]
49. SLC26A2 ENSGALG00000001239 3 1 - - 1.000 - - - - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
50. TMEFF2 ENSGALG00000007759 93 1 - - - - - - 1.000 - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
51. TTC7B ENSGALG00000010680 4 1 - - - - - - 1.000 - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
52. ENSGALG00000012928 ENSGALG00000012928 2 1 - - - - - - 1.000 - - -
53. PPIL6 ENSGALG00000015237 11 1 - - - - - - 1.000 - - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
54. KLHL8 ENSGALG00000011017 3 1 - - 1.000 - - - - - - - kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
55. TSNARE1 ENSGALG00000037014 2 1 - - 1.000 - - - - - - - t-SNARE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26437]
56. ENSGALG00000006114 ENSGALG00000006114 1 1 - - 1.000 - - - - - - -
57. gga-mir-18b ENSGALG00000018324 0 1 - - 1.000 - - - - - - - gga-mir-18b [Source:miRBase;Acc:MI0001209]
58. LNX1 ENSGALG00000013940 2 1 - - 1.000 - - - - - - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
59. MYO1E ENSGALG00000004150 40 1 - - - - - - 1.000 - - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
60. ADCY1 ENSGALG00000031170 4 1 - - - - - - 1.000 - - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
61. FAM149B1 ENSGALG00000002693 16 1 - - - - - - 1.000 - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
62. OGFRL1 ENSGALG00000015951 69 1 - - - - - - 1.000 - - - opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]
63. NKX6-3 ENSGALG00000018503 1 1 - - 1.000 - - - - - - - NK6 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:26328]
64. TMEM156 ENSGALG00000024490 9 1 - - - - - - 1.000 - - - transmembrane protein 156, transcript variant X5
65. SMIM15 ENSGALG00000023443 4 1 - - 1.000 - - - - - - - small integral membrane protein 15 [Source:NCBI gene;Acc:770642]
66. IL8 ENSGALG00000026098 16 1 - - - - - - 1.000 - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
67. GTPBP6 ENSGALG00000016717 17 1 - - - - - - 1.000 - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
68. CSF3 ENSGALG00000030907 11 1 - - 1.000 - - - - - - - colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
69. ABCA2 ENSGALG00000036894 12 1 - - - - - - 1.000 - - - ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]
70. SPAG17 55 1 - - - - - - 1.000 - - - sperm associated antigen 17
71. GRIA4 ENSGALG00000038995 29 1 - - - - - - 1.000 - - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
72. ENSGALG00000021344 ENSGALG00000021344 50 1 - - - - - - 1.000 - - -
73. ENSGALG00000023581 ENSGALG00000023581 0 1 - - 1.000 - - - - - - -
74. NEUROD1 ENSGALG00000008908 3 1 - - 1.000 - - - - - - - neuronal differentiation 1 [Source:NCBI gene;Acc:395754]
75. SPEF2 ENSGALG00000023552 23 1 - - - - - - 1.000 - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
76. CLDN15 ENSGALG00000038964 21 1 - - - - - - 1.000 - - - claudin 15, transcript variant X4
77. SNORA73 SNORA73 1644 1 - - - - - - 1.000 - - -
78. IL10R1 IL10R1 9 1 - - - - - - 1.000 - - -
79. KLHL23 ENSGALG00000020737 13 1 - - - - - - 1.000 - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
80. HOXD10 ENSGALG00000009270 66 1 - - 1.000 - - - - - - - homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
81. BPIFB7 BPIFB7 22 1 - - 1.000 - - - - - - -
82. INSRR ENSGALG00000013253 54 1 - - - - - - 1.000 - - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
83. DCX ENSGALG00000007993 335 0.989 - - - - - - - 0.989 - - doublecortin [Source:NCBI gene;Acc:374242]
84. PARD6B ENSGALG00000007994 15 0.989 - - - - - - - 0.989 - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
85. DDX11 49 0.947 - - - - - - 0.947 - - - DEAD/H-box helicase 11, transcript variant X1
86. WDR31 ENSGALG00000008859 18 0.941 - - - - - - - 0.941 - - WD repeat domain 31 [Source:HGNC Symbol;Acc:HGNC:21421]
87. ATRN ENSGALG00000016034 16 0.918 - - 0.918 - - - - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
88. CPAMD8 ENSGALG00000003742 151 0.852 - - - - - - 0.852 - - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
89. BCOR ENSGALG00000016245 85 0.816 - - - - - - - 0.816 - - BCL6 corepressor, transcript variant X8
90. TTC21B ENSGALG00000010956 124 0.815 - - - - - - 0.815 - - - tetratricopeptide repeat domain 21B [Source:HGNC Symbol;Acc:HGNC:25660]
91. OSTN ENSGALG00000007226 33 0.814 - - 0.814 - - - - - - - osteocrin [Source:NCBI gene;Acc:424907]
92. LNP1 ENSGALG00000015287 14 0.812 - - - - - - - 0.812 - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
93. TRPM6 3 0.812 - - - - - - - 0.812 - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
94. ENSGALG00000006897 ENSGALG00000006897 13 0.812 - - - - - - - 0.812 - -
95. TBC1D2B ENSGALG00000003322 54 0.812 - - - - - - - 0.812 - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
96. IRF8 ENSGALG00000005757 5 0.812 - - - - - - - 0.812 - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
97. SHISA2 ENSGALG00000043035 1 0.812 - - - - - - - 0.812 - - shisa family member 2 [Source:NCBI gene;Acc:395162]
98. AGBL2 ENSGALG00000029618 8 0.812 - - - - - - - 0.812 - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
99. SLC25A12 ENSGALG00000009545 36 0.812 - - - - - - - 0.812 - - solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]
100. GMNC ENSGALG00000026907 6 0.812 - - - - - - - 0.812 - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]

There are 76 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA