Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF13

Gene Name Gene ID Reads Annotation
RNF13 ENSGALG00000010411 8749 ring finger protein 13 [Source:NCBI gene;Acc:396303]











Genes with expression patterns similar to RNF13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF13 ENSGALG00000010411 8749 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 13 [Source:NCBI gene;Acc:396303]
2. CTNNBL1 ENSGALG00000006817 6765 0.994 - - - - - - 0.994 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
3. APITD1 APITD1 11830 0.991 - - - - - - 0.991 - - -
4. COMMD8 ENSGALG00000026279 13509 0.99 - - - - - - 0.990 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
5. GALNTL4 GALNTL4 3548 0.989 - - - - - - 0.989 - - -
6. CDC5L ENSGALG00000016704 22893 0.989 - - - - - - 0.989 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
7. TTF1 4214 0.989 - - - - - - 0.989 - - - transcription termination factor 1
8. SERBP1 ENSGALG00000011229 30489 0.989 - - - - - - 0.989 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
9. USO1 ENSGALG00000010878 9506 0.988 - - - - - - 0.988 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
10. PPP3CB ENSGALG00000005243 8794 0.988 - - - - - - 0.988 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
11. MYBL2 ENSGALG00000003503 15875 0.988 - - - - - - 0.988 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
12. MMADHC ENSGALG00000012473 9026 0.987 - - - - - - 0.987 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
13. gga-mir-1723 ENSGALG00000025386 6662 0.987 - - - - - - 0.987 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
14. POLB ENSGALG00000040828 7462 0.987 - - - - - - 0.987 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
15. CCDC90B ENSGALG00000037072 5088 0.987 - - - - - - 0.987 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
16. GCAT ENSGALG00000012312 7906 0.987 - - - - - - 0.987 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
17. DIS3 ENSGALG00000016930 3696 0.987 - - - - - - 0.987 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
18. NOB1 ENSGALG00000000693 15442 0.986 - - - - - - 0.986 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
19. FHL3 ENSGALG00000035187 9753 0.986 - - - - - - 0.986 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
20. C6H10ORF32 C6H10ORF32 7694 0.986 - - - - - - 0.986 - - -
21. ABRACL ENSGALG00000013826 19445 0.986 - - - - - - 0.986 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
22. GLT8D1 ENSGALG00000001642 4232 0.986 - - - - - - 0.986 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
23. LOC424109 ENSGALG00000008738 3932 0.986 - - - - - - 0.986 - - - alpha-aspartyl dipeptidase
24. CCAR1 ENSGALG00000004108 13219 0.985 - - - - - - 0.985 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
25. RPF1 ENSGALG00000008796 9809 0.984 - - - - - - 0.984 - - - ribosome production factor 1 homolog
26. MRPS34 ENSGALG00000001792 14262 0.984 - - - - - - 0.984 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
27. PRKG1 ENSGALG00000003805 4654 0.984 - - - - - - 0.984 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
28. ENSGALG00000006730 ENSGALG00000006730 3695 0.984 - - - - - - 0.984 - - -
29. MRPS15 ENSGALG00000044433 15356 0.984 - - - - - - 0.984 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
30. CTBPL ENSGALG00000007642 14238 0.984 - - - - - - - 0.984 - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
31. POLR2C ENSGALG00000001168 10703 0.983 - - - - - - 0.983 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
32. LOC425795 ENSGALG00000027696 2357 0.983 - - - - - - 0.983 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
33. CNBP 42704 0.983 - - - - - - 0.983 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
34. TP53INP1 ENSGALG00000041353 6890 0.983 - - - - - - 0.983 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
35. ZNF276 ENSGALG00000000513 2410 0.983 - - - - - - 0.983 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
36. PELI1 ENSGALG00000008837 11561 0.983 - - - - - - 0.983 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
37. CRAC1A CRAC1A 5265 0.982 - - - - - - 0.982 - - -
38. DNAJC10 ENSGALG00000008862 3114 0.982 - - - - - - 0.982 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
39. ANLN 10479 0.982 - - - - - - 0.982 - - - anillin actin binding protein, transcript variant X2
40. ATPAF2 ENSGALG00000004926 3393 0.982 - - - - - - 0.982 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
41. SNAPIN ENSGALG00000026796 11155 0.982 - - - - - - 0.982 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
42. GSDMA ENSGALG00000013495 1650 0.981 - - - - - - 0.981 - - - gasdermin A [Source:NCBI gene;Acc:426132]
43. SPINT1 ENSGALG00000008469 5735 0.981 - - - - - - 0.981 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
44. ACTR6 ENSGALG00000040976 31271 0.981 - - - - - - 0.981 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
45. LUZP2 ENSGALG00000030151 585 0.981 - - - - - - 0.981 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
46. RPUSD4 ENSGALG00000024326 3788 0.981 - - - - - - 0.981 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
47. SAV1 ENSGALG00000012341 3313 0.981 - - - - - - 0.981 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
48. PSMD13 ENSGALG00000043684 14720 0.981 - - - - - - 0.981 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
49. CHL1 ENSGALG00000037856 1565 0.981 - - - - - - 0.981 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
50. GDPD4 ENSGALG00000000690 824 0.981 - - - - - - 0.981 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
51. CSDE1 ENSGALG00000002139 1683 0.981 - - - - - - 0.981 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
52. LYVE1 ENSGALG00000005643 1230 0.98 - - - - - - 0.980 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
53. MOB4 ENSGALG00000008128 10322 0.98 - - - - - - 0.980 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
54. MAPT ENSGALG00000000625 659 0.98 - - - - - - 0.980 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
55. LHFPL2 ENSGALG00000004437 500 0.98 - - - - - - 0.980 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
56. MRPS36 ENSGALG00000014789 7584 0.978 - - - - - - 0.978 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
57. FGD5 ENSGALG00000008546 4031 0.976 - - - - - - 0.976 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
58. EPHA3 ENSGALG00000015403 9811 0.976 - - - - - - 0.976 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
59. MRPS26 ENSGALG00000014118 27422 0.976 - - - - - - 0.976 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
60. ENSGALG00000013825 ENSGALG00000013825 16473 0.975 - - - - - - 0.975 - - -
61. SH3RF3 ENSGALG00000016810 2169 0.974 - - - - - - 0.974 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
62. TBL1X ENSGALG00000040006 28597 0.971 - - - - - - 0.971 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
63. CCT5 ENSGALG00000013041 56190 0.969 - - - - - - 0.969 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
64. ENSGALG00000000360 ENSGALG00000000360 15320 0.962 - - - - - - 0.962 - - -
65. HDLBP ENSGALG00000005823 24636 0.96 - - - - - - 0.960 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
66. ZDHHC6 ENSGALG00000008870 16575 0.96 - - - - - - 0.960 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
67. PRDX1 ENSGALG00000010243 151918 0.956 - - - - - - 0.956 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
68. BUB3 ENSGALG00000009681 36055 0.955 - - - - - - 0.955 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
69. EZH2 ENSGALG00000043399 15881 0.955 - - - - - - 0.955 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
70. TRIB2 ENSGALG00000016457 17641 0.954 - - - - - - 0.954 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
71. TPI1 ENSGALG00000014526 43273 0.951 - - - - - - 0.951 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
72. EXOSC7 ENSGALG00000030084 8654 0.95 - - - - - - 0.950 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
73. MED1 ENSGALG00000001708 9556 0.949 - - - - - - 0.949 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
74. TRA2A ENSGALG00000010973 37101 0.948 - - - - - - 0.948 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
75. RAB10 ENSGALG00000016535 5272 0.948 - - - - - - - 0.948 - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
76. STAG2 ENSGALG00000008482 13629 0.947 - - - - - - 0.947 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
77. DDX18 ENSGALG00000012147 12463 0.944 - - - - - - 0.944 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
78. SNX17 ENSGALG00000032468 13519 0.94 - - - - - - 0.940 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
79. LOC407092 ENSGALG00000013809 10706 0.938 - - - - - - 0.938 - - - AD012Z, transcript variant X5
80. TAF12 ENSGALG00000000991 8709 0.936 - - - - - - 0.936 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
81. VDAC3 ENSGALG00000041463 21595 0.932 - - - - - - 0.932 - - - voltage dependent anion channel 3, transcript variant X9
82. SNRPB2 28675 0.93 - - - - - - 0.930 - - - small nuclear ribonucleoprotein polypeptide B2
83. WLS ENSGALG00000011238 20969 0.919 - - - - - - 0.919 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
84. ARGLU1 ENSGALG00000016855 25633 0.917 - - - - - - 0.917 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
85. CHPKCI CHPKCI 36217 0.889 - - - - - - 0.889 - - -
86. ST13 ENSGALG00000012007 25670 0.886 - - - - - - 0.886 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
87. RPS25 ENSGALG00000007699 156127 0.883 - - - - - - 0.883 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
88. RBBP6 ENSGALG00000006043 9708 0.88 - - - - - - - 0.880 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
89. UBE2N ENSGALG00000030515 32059 0.878 - - - - - - 0.878 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
90. BRIX1 ENSGALG00000003373 27878 0.84 - - - - - - 0.840 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
91. HNRNPU ENSGALG00000010671 56560 0.838 - - - - - - 0.838 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
92. CKAP4 ENSGALG00000012659 36398 0.833 - - - - - - 0.833 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
93. SAAL1 ENSGALG00000026111 8340 0.827 - - - - - - 0.827 - - - serum amyloid A like 1
94. CDC27 ENSGALG00000000596 12014 0.825 - - - - - - 0.825 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
95. HBE 329974 0.823 - - - - - - 0.823 - - - hemoglobin subunit epsilon
96. GNA13 ENSGALG00000036028 9791 0.816 - - - - - - - 0.816 - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
97. PRDX4 ENSGALG00000016357 32208 0.815 - - - - - - 0.815 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
98. DDX21 ENSGALG00000004144 13105 0.799 - - - - - - - 0.799 - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
99. SEC61G ENSGALG00000037863 83362 0.742 - - - - - - 0.742 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
100. TPX2 ENSGALG00000006267 26087 0.717 - - - - - - - 0.717 - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]

There are 1 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA