Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFX4

Gene Name Gene ID Reads Annotation
RFX4 ENSGALG00000012647 119 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]











Genes with expression patterns similar to RFX4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFX4 ENSGALG00000012647 119 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
2. DTX4 ENSGALG00000010835 25 1.897 - - - 0.897 - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
3. EFEMP1 ENSGALG00000037901 704 1.846 - - - - - 0.872 - 0.974 - - EGF containing fibulin extracellular matrix protein 1 [Source:HGNC Symbol;Acc:HGNC:3218]
4. CADM3 ENSGALG00000036925 1753 1.788 - - - - - 0.853 - 0.935 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
5. PTPRO ENSGALG00000013085 26 1.753 - - - - - - 0.753 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
6. ENSGALG00000022967 ENSGALG00000022967 240 1.721 - - - - - - 0.721 1.000 - -
7. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
8. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
9. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
10. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
11. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
12. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
13. BAFF BAFF 40 1 - - - - - - - 1.000 - -
14. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
15. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
16. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
17. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
18. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
19. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
20. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
21. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
22. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
23. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
24. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
25. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
26. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
27. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
28. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
29. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
30. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
31. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
32. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
33. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
34. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
35. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
36. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
37. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
38. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
39. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
40. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
41. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
42. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
43. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
44. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
45. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
46. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
47. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
48. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
49. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
50. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
51. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
52. LICOS LICOS 13 1 - - - - - - - 1.000 - -
53. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
54. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
55. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
56. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
57. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
58. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
59. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
60. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
61. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
62. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
63. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
64. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
65. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
66. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
67. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
68. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
69. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
70. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
71. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
72. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
73. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
74. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
75. MUT ENSGALG00000016697 43 1 - - - - - - - 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
76. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
77. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
78. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
79. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
80. CD101 12 1 - - - - - - 1.000 - - - CD101 molecule, transcript variant X4
81. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
82. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
83. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
84. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
85. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
86. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
87. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
88. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
89. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
90. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
91. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
92. TRAF6 ENSGALG00000007932 12 1 - - - - - - - 1.000 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
93. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
94. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
95. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
96. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
97. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
98. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
99. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
100. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA