Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFT1

Gene Name Gene ID Reads Annotation
RFT1 ENSGALG00000001945 2446 RFT1 homolog [Source:NCBI gene;Acc:770487]











Genes with expression patterns similar to RFT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFT1 ENSGALG00000001945 2446 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RFT1 homolog [Source:NCBI gene;Acc:770487]
2. PPM1D ENSGALG00000035610 6530 1.724 - - - - - - 0.734 0.990 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
3. ABHD17A ENSGALG00000041163 5578 1.543 - - - - - - 0.765 0.778 - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
4. TRIP12 ENSGALG00000002929 11713 1.485 - - - - - - 0.739 0.746 - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
5. PDCD6IP ENSGALG00000033500 580 0.999 - - - - - - - 0.999 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
6. ELAVL4 ENSGALG00000010533 4978 0.999 - - - - - - - 0.999 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
7. CRELD2 ENSGALG00000008551 2084 0.999 - - - - - - - 0.999 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
8. ATP2B4 ENSGALG00000003601 3746 0.999 - - - - - - - 0.999 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
9. RNF168 ENSGALG00000006392 507 0.999 - - - - - - - 0.999 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
10. PIGL ENSGALG00000004492 669 0.999 - - - - - - - 0.999 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
11. ENSGALG00000012250 ENSGALG00000012250 581 0.999 - - - - - - - 0.999 - -
12. FBF1 ENSGALG00000002179 1738 0.999 - - - - - - - 0.999 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
13. ZNF319 ENSGALG00000000999 1272 0.999 - - - - - - - 0.999 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
14. SPDYA ENSGALG00000017392 503 0.999 - - - - - - - 0.999 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
15. RAI2 ENSGALG00000016538 1074 0.998 - - - - - - - 0.998 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
16. SLC35D1 ENSGALG00000011121 4456 0.998 - - - - - - - 0.998 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
17. RNFT1 ENSGALG00000005205 2888 0.998 - - - - - - - 0.998 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
18. SNIP1 ENSGALG00000002010 1429 0.998 - - - - - - - 0.998 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
19. PMP22 ENSGALG00000031425 5358 0.998 - - - - - - - 0.998 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
20. TMEM192 ENSGALG00000009528 2428 0.998 - - - - - - - 0.998 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
21. CENPL ENSGALG00000038411 4867 0.998 - - - - - - - 0.998 - - centromere protein L [Source:NCBI gene;Acc:426563]
22. NVL ENSGALG00000009322 5286 0.997 - - - - - - - 0.997 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
23. C6ORF192 C6ORF192 4224 0.997 - - - - - - - 0.997 - -
24. ALS2 ENSGALG00000008415 2576 0.997 - - - - - - - 0.997 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
25. MAP2K2 ENSGALG00000001267 3857 0.996 - - - - - - - 0.996 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
26. ATE1 ENSGALG00000009502 3751 0.996 - - - - - - - 0.996 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
27. FUNDC2 ENSGALG00000029585 9334 0.995 - - - - - - - 0.995 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
28. TMEM126A ENSGALG00000014066 6149 0.995 - - - - - - - 0.995 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
29. NBL1 ENSGALG00000040297 8165 0.995 - - - - - - - 0.995 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
30. RCOR3 ENSGALG00000009871 7022 0.994 - - - - - - - 0.994 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
31. CETN1 ENSGALG00000026741 7243 0.994 - - - - - - - 0.994 - - centrin 1 [Source:NCBI gene;Acc:422668]
32. CRNKL1 ENSGALG00000008429 7280 0.992 - - - - - - - 0.992 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
33. DLC1 ENSGALG00000013715 5297 0.992 - - - - - - - 0.992 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
34. CDCA7 ENSGALG00000040833 7484 0.992 - - - - - - - 0.992 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
35. IFNAR2 ENSGALG00000041867 1596 0.992 - - - - - - - 0.992 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
36. TTL ENSGALG00000008614 3991 0.992 - - - - - - - 0.992 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
37. YAF2 ENSGALG00000009540 8452 0.991 - - - - - - - 0.991 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
38. PPP3R1 ENSGALG00000023648 3417 0.991 - - - - - - - 0.991 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
39. RBM7 ENSGALG00000007017 8779 0.988 - - - - - - - 0.988 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
40. G3BP2 ENSGALG00000010882 21129 0.988 - - - - - - - 0.988 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
41. PDHB ENSGALG00000029576 12254 0.986 - - - - - - - 0.986 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
42. gga-mir-6587 ENSGALG00000026386 9441 0.985 - - - - - - - 0.985 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
43. EXO1 ENSGALG00000010748 7572 0.982 - - - - - - - 0.982 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
44. JSC JSC 7982 0.975 - - - - - - - 0.975 - -
45. RFC3 ENSGALG00000017064 7011 0.972 - - - - - - - 0.972 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
46. KIAA0196 KIAA0196 4011 0.971 - - - - - - - 0.971 - -
47. XPO5 ENSGALG00000010341 24765 0.968 - - - - - - - 0.968 - - exportin 5 [Source:NCBI gene;Acc:421450]
48. COX7A2L ENSGALG00000037996 13646 0.966 - - - - - - - 0.966 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
49. NUP107 ENSGALG00000009934 2097 0.963 - - - - - - - 0.963 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
50. GARS ENSGALG00000005694 18264 0.963 - - - - - - - 0.963 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
51. AP2B1 ENSGALG00000042125 13229 0.962 - - - - - - - 0.962 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
52. INPP5A ENSGALG00000010493 6769 0.961 - - - - - - - 0.961 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
53. SBNO1 ENSGALG00000003392 6731 0.959 - - - - - - - 0.959 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
54. SFT2D1 ENSGALG00000020005 10855 0.957 - - - - - - - 0.957 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
55. TPD52 ENSGALG00000040167 9891 0.957 - - - - - - - 0.957 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
56. ANKRD11 ENSGALG00000006222 12327 0.956 - - - - - - - 0.956 - - ankyrin repeat domain 11, transcript variant X2
57. XRCC5 ENSGALG00000011492 6802 0.941 - - - - - - - 0.941 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
58. MRPL54 ENSGALG00000027611 39450 0.932 - - - - - - - 0.932 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
59. EIF3I ENSGALG00000003337 28832 0.931 - - - - - - 0.931 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
60. PRTG ENSGALG00000037336 34665 0.927 - - - - - - - 0.927 - - protogenin [Source:NCBI gene;Acc:415407]
61. MBNL2 ENSGALG00000016890 3162 0.926 - - - - - - 0.926 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
62. HELLS ENSGALG00000005451 7094 0.924 - - - - - - 0.924 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
63. PARD3B ENSGALG00000042645 2893 0.919 - - - - - - 0.919 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
64. PPA2 ENSGALG00000010582 22301 0.918 - - - - - - - 0.918 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
65. Sep-02_1 Sep-02_1 19203 0.916 - - - - - - - 0.916 - -
66. NUP205 ENSGALG00000011662 4157 0.914 - - - - - - 0.914 - - - nucleoporin 205
67. NAT9 ENSGALG00000007723 2098 0.913 - - - - - - 0.913 - - - N-acetyltransferase 9 (putative), transcript variant X7
68. ATG4B ENSGALG00000006298 2288 0.912 - - - - - - 0.912 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
69. UCH-L1 UCH-L1 12697 0.911 - - - - - - 0.911 - - -
70. NSG1 ENSGALG00000015010 5829 0.91 - - - - - - 0.910 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
71. FAM193A ENSGALG00000015667 3075 0.91 - - - - - - 0.910 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
72. DIEXF ENSGALG00000009887 4782 0.91 - - - - - - 0.910 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
73. ENSGALG00000017396 ENSGALG00000017396 9028 0.909 - - - - - - - 0.909 - -
74. CHD4 ENSGALG00000013565 25695 0.909 - - - - - - - 0.909 - - chromodomain helicase DNA binding protein 4
75. WIPI1 ENSGALG00000004215 3359 0.908 - - - - - - 0.908 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
76. PIF1 ENSGALG00000009032 2342 0.904 - - - - - - 0.904 - - - PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]
77. SUGP1 ENSGALG00000042132 2771 0.904 - - - - - - 0.904 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
78. ALDH18A1 ENSGALG00000034655 3038 0.903 - - - - - - 0.903 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
79. SLC25A39 ENSGALG00000042894 10654 0.902 - - - - - - - 0.902 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
80. FAM98A ENSGALG00000010428 9585 0.902 - - - - - - - 0.902 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
81. ZOV3 ZOV3 3267 0.901 - - - - - - - 0.901 - -
82. TNFAIP8L1 ENSGALG00000004266 12611 0.901 - - - - - - - 0.901 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
83. CDC42EP4 ENSGALG00000023364 9240 0.901 - - - - - - - 0.901 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
84. LFNG ENSGALG00000038515 5178 0.9 - - - - - - 0.900 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
85. TAF8 ENSGALG00000003498 2071 0.9 - - - - - - 0.900 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
86. ETAA1 ENSGALG00000027922 1684 0.899 - - - - - - 0.899 - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
87. CDC42SE2 ENSGALG00000027258 4725 0.897 - - - - - - 0.897 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
88. NT5C2 ENSGALG00000008179 1760 0.894 - - - - - - 0.894 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
89. BRD1 ENSGALG00000029379 6047 0.894 - - - - - - 0.894 - - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
90. LSM10 ENSGALG00000002127 2519 0.893 - - - - - - 0.893 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
91. C13H5ORF41 C13H5ORF41 1051 0.893 - - - - - - 0.893 - - -
92. NDUFV3 ENSGALG00000022813 4456 0.891 - - - - - - 0.891 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
93. MBTPS1 ENSGALG00000003293 4843 0.89 - - - - - - 0.890 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
94. NCAPG2 ENSGALG00000006525 2319 0.889 - - - - - - 0.889 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
95. ZNF142 ENSGALG00000011393 2078 0.887 - - - - - - 0.887 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
96. KANK4 ENSGALG00000010953 726 0.886 - - - - - - 0.886 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
97. IK ENSGALG00000037172 12100 0.885 - - - - - - 0.885 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
98. ENSGALG00000013233 ENSGALG00000013233 3265 0.884 - - - - - - 0.884 - - -
99. SUN1 ENSGALG00000003781 3442 0.884 - - - - - - 0.884 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
100. USP54 ENSGALG00000005232 2749 0.883 - - - - - - 0.883 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]

There are 309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA