Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBBP6_1

Gene Name Gene ID Reads Annotation
RBBP6_1 ENSGALG00000006043 26 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]











Genes with expression patterns similar to RBBP6_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBBP6_1 ENSGALG00000006043 26 6 - - - 1.000 1.000 1.000 1.000 1.000 - 1.000 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
2. ISPD ENSGALG00000010795 7 1.796 - - - - 0.837 - - - - 0.959 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
3. AQP1 ENSGALG00000005209 111 1.619 - - - - - - - 0.723 - 0.896 aquaporin 1 [Source:NCBI gene;Acc:420384]
4. PNPLA7 ENSGALG00000008736 206 1.55 - - - - - - 0.834 - - 0.716 patatin like phospholipase domain containing 7 [Source:NCBI gene;Acc:427774]
5. LPP ENSGALG00000007337 18 1 - - - - - - 1.000 - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
6. DDAH1 ENSGALG00000008663 8 1 - - - - - - 1.000 - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
7. SYTL2L ENSGALG00000008326 5 1 - - - - - - 1.000 - - - synaptotagmin-like protein 2-like, transcript variant X4
8. SNAPC4 ENSGALG00000044726 36 1 - - - - - - 1.000 - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
9. PDE6C ENSGALG00000006626 6 1 - - - - - - 1.000 - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
10. HOXB4 ENSGALG00000000284 16 1 - - - - - - 1.000 - - - homeobox B4 [Source:NCBI gene;Acc:396230]
11. WNT9A ENSGALG00000005401 7 1 - - - - - - 1.000 - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
12. gga-mir-1652 ENSGALG00000025444 119 1 - - - - - - 1.000 - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
13. AMER3 ENSGALG00000041501 5 1 - - - - - - 1.000 - - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
14. FAM120B ENSGALG00000011180 101 1 - - - - - - 1.000 - - - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
15. DAZL ENSGALG00000011243 34 1 - - - - - - 1.000 - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
16. INTS3 8 1 - - - - - - 1.000 - - - integrator complex subunit 3, transcript variant X2
17. KRT20 ENSGALG00000019716 11 1 - - - - - - 1.000 - - - keratin 20 [Source:NCBI gene;Acc:420045]
18. MBLAC2 ENSGALG00000014649 16 1 - - - - - - 1.000 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
19. CYP39A1 ENSGALG00000016710 16 1 - - - - - - 1.000 - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
20. FAM26D ENSGALG00000014955 1 1 - - - - - - 1.000 - - - family with sequence similarity 26 member D
21. GBP ENSGALG00000026152 38 1 - - - - - - 1.000 - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
22. JMJD4 ENSGALG00000005417 10 1 - - - - - - 1.000 - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
23. ENSGALG00000000789 ENSGALG00000000789 24 1 - - - - - - 1.000 - - -
24. ENSGALG00000018374 ENSGALG00000018374 3 1 - - - - - - 1.000 - - -
25. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - 1.000 - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
26. ODF1 ENSGALG00000035199 32 1 - - - - - - 1.000 - - - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
27. STK31 ENSGALG00000010980 4 1 - - - - - - 1.000 - - - serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]
28. AGPAT2 ENSGALG00000023517 21 1 - - - - - - 1.000 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
29. DNAI2 ENSGALG00000004495 45 1 - - - - - - 1.000 - - - dynein axonemal intermediate chain 2
30. DNAH7 ENSGALG00000007841 32 0.96 - - - - - - - - - 0.960 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
31. gga-mir-1600 ENSGALG00000025438 248 0.955 - - - - - - - - - 0.955 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
32. ENSGALG00000012920 ENSGALG00000012920 8 0.945 - - - - - - - - - 0.945
33. NOX3 ENSGALG00000013659 4 0.945 - - - - - - - - - 0.945 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
34. NCX1 NCX1 9 0.945 - - - - - - - - - 0.945
35. CHST8 ENSGALG00000004903 16 0.945 - - - - - - - - - 0.945 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
36. GPR12 ENSGALG00000017102 4 0.945 - - - - - - - - - 0.945 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
37. MUC4 4 0.945 - - - - - - - - - 0.945 mucin 4, cell surface associated, transcript variant X5
38. C2 ENSGALG00000035721 5 0.945 - - - - - - - - - 0.945 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
39. IFNG ENSGALG00000009903 5 0.945 - - - - - - - - - 0.945 interferon gamma [Source:NCBI gene;Acc:396054]
40. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.945 - - - - - - - - - 0.945 secretin, transcript variant X6
41. ROS1 ENSGALG00000014913 7 0.945 - - - - - - - - - 0.945 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
42. ZC3H7B ENSGALG00000011965 6 0.944 - - - - - - - - - 0.944 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
43. SUB1L1 ENSGALG00000027147 73 0.944 - - - - - - - - - 0.944 SUB1 homolog (S. cerevisiae)-like 1
44. RPS6KA3 ENSGALG00000016406 24 0.942 - - - - - - 0.942 - - - ribosomal protein S6 kinase A3 [Source:HGNC Symbol;Acc:HGNC:10432]
45. CFH ENSGALG00000002431 31 0.941 - - - - - - - - - 0.941 complement factor H, transcript variant X1
46. STOML3 ENSGALG00000017039 6 0.941 - - - - - - - - - 0.941 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
47. CSF3 ENSGALG00000030907 11 0.941 - - - - - - - - - 0.941 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
48. CCR5 ENSGALG00000037077 23 0.937 - - - - - - - - - 0.937 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
49. DENND1B ENSGALG00000002246 6 0.937 - - - - - - - - - 0.937 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
50. LOC100858777 ENSGALG00000027624 58 0.927 - - - - - - - - - 0.927 rhodopsin, GQ-coupled-like
51. PLIN3 ENSGALG00000044632 370 0.927 - - - - - - - - - 0.927 perilipin 3, transcript variant X2
52. ZNF770 ENSGALG00000009817 27 0.927 - - - - - - - - - 0.927 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
53. LHX9 ENSGALG00000002223 12 0.925 - - - - - - - - - 0.925 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
54. SERPINE3 ENSGALG00000017017 32 0.923 - - - - - - - - - 0.923 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
55. SPINK4 ENSGALG00000043964 50 0.921 - - - - - - - - - 0.921 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
56. PPTC7 ENSGALG00000004550 154 0.916 - - - - - - - - - 0.916 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
57. ECSCR ENSGALG00000024379 313 0.914 - - - - - - - - - 0.914 endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
58. CPNE7 ENSGALG00000000507 54 0.912 - - - - - - - - - 0.912 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
59. ADAMTS5 ENSGALG00000015795 6 0.91 - - - - - - - - - 0.910 ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
60. TTC9 ENSGALG00000017652 16 0.91 - - - - - - - - - 0.910 tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
61. ENSGALG00000001629 ENSGALG00000001629 31 0.906 - - - - - - - - - 0.906
62. MMEL1 ENSGALG00000001115 46 0.905 - - - - - - - - - 0.905 membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
63. ESM1 ENSGALG00000027707 328 0.904 - - - - - - - - - 0.904 endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]
64. EDC4 ENSGALG00000040875 44 0.903 - - - - - - - - - 0.903 enhancer of mRNA decapping 4 [Source:HGNC Symbol;Acc:HGNC:17157]
65. CTNNA3 ENSGALG00000002845 127 0.901 - - - - - - - - - 0.901 catenin alpha 3 [Source:NCBI gene;Acc:423648]
66. SDSL ENSGALG00000008317 55 0.898 - - - - - - - - - 0.898 serine dehydratase like [Source:NCBI gene;Acc:417030]
67. RGS6 ENSGALG00000009368 19 0.896 - - - - - - - - - 0.896 regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
68. MISP 52 0.894 - - - - - - - - - 0.894 mitotic spindle positioning, transcript variant X2
69. LRRC3B ENSGALG00000011314 26 0.894 - - - - - - - - - 0.894 leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
70. LRRC49 ENSGALG00000004059 29 0.893 - - - - - - - - - 0.893 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
71. SPINK5 SPINK5 195 0.889 - - - - - - - - - 0.889
72. TERF2IP ENSGALG00000000903 41 0.88 - - - - - - - - - 0.880 TERF2 interacting protein [Source:NCBI gene;Acc:395122]
73. ZFYVE26 ENSGALG00000028762 18 0.878 - - - - - - - - - 0.878 zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
74. SNAPC1 ENSGALG00000011868 65 0.876 - - - - - - - - - 0.876 small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
75. ENSGALG00000023119 ENSGALG00000023119 156 0.871 - - - - - - - - - 0.871
76. AK5 ENSGALG00000031652 12 0.867 - - - - - - - - - 0.867 adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
77. EFCAB6 ENSGALG00000014188 139 0.861 - - - - - - 0.861 - - - EF-hand calcium binding domain 6, transcript variant X3
78. ATXN7L1 ENSGALG00000008115 84 0.858 - - - - - - - - - 0.858 ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
79. HACD4 ENSGALG00000028142 395 0.856 - - - - - - - - - 0.856 3-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]
80. ZNF22 ZNF22 25 0.853 - - - - - - - - - 0.853
81. PLEKHJ1 ENSGALG00000000835 55 0.851 - - - - - - - 0.851 - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
82. AGAP1 ENSGALG00000004045 47 0.849 - - - - - - - - - 0.849 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]
83. RICTOR ENSGALG00000003775 247 0.839 - - - - - - - 0.839 - - RPTOR independent companion of MTOR complex 2 [Source:HGNC Symbol;Acc:HGNC:28611]
84. GPAM ENSGALG00000008795 18 0.839 - - - - - - 0.839 - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
85. STAB2 32 0.838 - - - - - - - - - 0.838 stabilin 2
86. MEGF6L ENSGALG00000009458 14 0.837 - - - - 0.837 - - - - - multiple EGF-like-domains 6-like, transcript variant X21
87. BCOR ENSGALG00000016245 85 0.837 - - - - 0.837 - - - - - BCL6 corepressor, transcript variant X8
88. COL4A3 ENSGALG00000038612 41 0.837 - - - - 0.837 - - - - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
89. FOXN4 ENSGALG00000005062 7 0.837 - - - - 0.837 - - - - - forkhead box N4 [Source:NCBI gene;Acc:416898]
90. MESP2 ENSGALG00000008275 2 0.837 - - - - 0.837 - - - - - mesoderm posterior bHLH transcription factor 2
91. GUCY1B3 29 0.837 - - - - 0.837 - - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
92. IL-3 IL-3 1 0.837 - - - - 0.837 - - - - -
93. OLFM4 ENSGALG00000016943 7 0.837 - - - - 0.837 - - - - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
94. FGF13 ENSGALG00000006508 8 0.837 - - - - 0.837 - - - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
95. TSPAN10 ENSGALG00000004525 6 0.837 - - - - 0.837 - - - - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
96. ENSGALG00000020738 ENSGALG00000020738 2 0.837 - - - - 0.837 - - - - -
97. PLEKHA1 ENSGALG00000034548 34 0.837 - - - - 0.837 - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
98. SLC26A4 ENSGALG00000007998 2 0.837 - - - - 0.837 - - - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
99. ZSWIM6 ENSGALG00000014734 7 0.837 - - - - 0.837 - - - - - zinc finger SWIM-type containing 6, transcript variant X2
100. TTBK1 ENSGALG00000008627 8 0.837 - - - - 0.837 - - - - - tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA