Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBBP6

Gene Name Gene ID Reads Annotation
RBBP6 ENSGALG00000006043 9708 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]











Genes with expression patterns similar to RBBP6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBBP6 ENSGALG00000006043 9708 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
2. ATRX ENSGALG00000007843 34172 3.239 0.875 0.735 0.789 - - - 0.840 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
3. BPTF ENSGALG00000038222 7521 2.529 0.706 - - - - - 0.955 - - 0.868 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
4. HMGB1 ENSGALG00000042875 83509 2.27 0.836 - 0.720 - - - - - - 0.714 high mobility group box 1 [Source:NCBI gene;Acc:395724]
5. THOC2 ENSGALG00000008507 9501 1.835 0.854 - - - - - 0.981 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
6. H2AFY_1 ENSGALG00000040141 4895 1.834 - - - - - - 0.971 0.863 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
7. LMNB2 ENSGALG00000000470 4364 1.826 - - - - - - 0.986 0.840 - - lamin B2 [Source:NCBI gene;Acc:396222]
8. KCTD9 ENSGALG00000000275 3455 1.813 - - - - - - 0.960 0.853 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
9. ARID4A ENSGALG00000012037 8554 1.795 0.827 - - - - - 0.968 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
10. AK6 ENSGALG00000020534 4791 1.792 - - - - - - 0.969 - - 0.823 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
11. SEMA4B ENSGALG00000008297 11202 1.752 - - - - - - 0.956 - - 0.796 semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
12. RILPL2 ENSGALG00000003321 5632 1.726 - - - - - - 0.975 - - 0.751 Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
13. CCND1 ENSGALG00000007555 6715 1.682 0.726 - - - - - 0.956 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
14. WBP11 ENSGALG00000011745 11182 1.644 - - - - - - 0.873 0.771 - - WW domain binding protein 11, transcript variant X1
15. KNOP1 ENSGALG00000002042 6251 1.641 0.783 - - - - - - 0.858 - - lysine-rich nucleolar protein 1, transcript variant X1
16. ANKRD17 ENSGALG00000011642 3192 1.635 0.765 - - - - - - 0.870 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
17. PSMG3 ENSGALG00000004203 11240 1.634 - - - - - - 0.927 - - 0.707 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
18. PTPN11 ENSGALG00000004821 2658 1.628 - - - - - - - 0.864 - 0.764 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
19. C5orf24 ENSGALG00000006371 1573 1.612 0.783 - - - - - - - - 0.829 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
20. ANKRD11 ENSGALG00000006222 12327 1.609 0.857 0.752 - - - - - - - - ankyrin repeat domain 11, transcript variant X2
21. PHF14 ENSGALG00000038041 13687 1.603 - - - - - - 0.744 - - 0.859 PHD finger protein 14 [Source:NCBI gene;Acc:420583]
22. CENPF ENSGALG00000009690 10429 1.601 0.702 - - - - - 0.899 - - - centromere protein F [Source:NCBI gene;Acc:395357]
23. EIF5B ENSGALG00000016764 30681 1.592 0.845 - - 0.747 - - - - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
24. HMGN5 ENSGALG00000007131 171006 1.591 0.853 0.738 - - - - - - - - high mobility group nucleosome binding domain 5, transcript variant X1
25. FGFRL1 ENSGALG00000037525 1687 1.572 - - - - - - - 0.869 0.703 - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
26. ZNF276 ENSGALG00000000513 2410 1.569 - - - - - - - 0.864 - 0.705 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
27. TET1 ENSGALG00000031604 13002 1.562 0.717 - - - - - - - - 0.845 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
28. S100A11 ENSGALG00000036711 23454 1.557 - - - - - - - - 0.729 0.828 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
29. DDHD1 ENSGALG00000012426 6068 1.555 0.709 - - - - - - 0.846 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
30. VRK1 ENSGALG00000011116 4524 1.552 0.705 - - - - - - 0.847 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
31. CLPTM1L ENSGALG00000013187 9733 1.552 - - - - - - 0.810 - - 0.742 CLPTM1 like [Source:NCBI gene;Acc:420973]
32. SRSF11 ENSGALG00000011305 10435 1.535 0.824 0.711 - - - - - - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
33. UBR7 ENSGALG00000010842 16488 1.509 - - - - - - 0.737 - - 0.772 Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
34. PARP1 ENSGALG00000009228 39433 1.488 0.772 0.716 - - - - - - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
35. FAM96B 14435 1.475 - - - - - - 0.718 - - 0.757 family with sequence similarity 96 member B
36. APP ENSGALG00000015770 9438 1.463 0.735 - - - - - - - - 0.728 amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
37. BOD1L1 ENSGALG00000026470 9250 1.456 0.739 0.717 - - - - - - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
38. DDX24 ENSGALG00000010884 5485 1.433 0.732 - - - - - - - - 0.701 DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
39. LEPROTL1 ENSGALG00000024482 4251 0.985 - - - - - - 0.985 - - - leptin receptor overlapping transcript-like 1
40. IMPACT ENSGALG00000015093 1334 0.981 - - - - - - 0.981 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
41. INTS10 ENSGALG00000010130 6320 0.981 - - - - - - 0.981 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
42. MSRA ENSGALG00000028032 2607 0.98 - - - - - - 0.980 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
43. IRAK2 ENSGALG00000008407 5934 0.979 - - - - - - 0.979 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
44. DNAJA3 ENSGALG00000007821 3963 0.979 - - - - - - 0.979 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
45. ABCD3 ENSGALG00000005647 4844 0.979 - - - - - - 0.979 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
46. MED6 ENSGALG00000029743 9414 0.979 - - - - - - 0.979 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
47. METTL11A METTL11A 11876 0.978 - - - - - - 0.978 - - -
48. AP2B1 ENSGALG00000042125 13229 0.978 - - - - - - 0.978 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
49. PNO1 ENSGALG00000009093 11153 0.978 - - - - - - 0.978 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
50. EIF4G3 ENSGALG00000010084 5881 0.978 - - - - - - 0.978 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
51. DISP1 3281 0.977 - - - - - - 0.977 - - - dispatched RND transporter family member 1, transcript variant X3
52. MYST2 MYST2 8078 0.977 - - - - - - 0.977 - - -
53. GCC2 ENSGALG00000016806 1085 0.977 - - - - - - 0.977 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
54. SHQ1 ENSGALG00000007798 1982 0.976 - - - - - - 0.976 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
55. CAMKK2 ENSGALG00000040131 2795 0.975 - - - - - - 0.975 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
56. EI24 ENSGALG00000038097 24081 0.975 - - - - - - 0.975 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
57. AKAP7 ENSGALG00000029794 3287 0.975 - - - - - - 0.975 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
58. UBAC1 ENSGALG00000042564 598 0.975 - - - - - - 0.975 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
59. NDUFB8 ENSGALG00000005704 5781 0.974 - - - - - - 0.974 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
60. CETN2 ENSGALG00000007510 1688 0.974 - - - - - - 0.974 - - - centrin 2 [Source:NCBI gene;Acc:422303]
61. KLHL29 ENSGALG00000016495 582 0.974 - - - - - - 0.974 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
62. POPDC3 ENSGALG00000027420 700 0.974 - - - - - - 0.974 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
63. YBX1 ENSGALG00000004848 20992 0.973 - - - - - - 0.973 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
64. ENSGALG00000002923 ENSGALG00000002923 2233 0.973 - - - - - - 0.973 - - -
65. SLC1A1 ENSGALG00000010187 637 0.973 - - - - - - 0.973 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
66. E2F6 ENSGALG00000016454 4747 0.973 - - - - - - 0.973 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
67. HACE1 ENSGALG00000015415 1194 0.973 - - - - - - 0.973 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
68. MTFMT ENSGALG00000007353 805 0.972 - - - - - - 0.972 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
69. SDCCAG8 ENSGALG00000010713 311 0.972 - - - - - - 0.972 - - - serologically defined colon cancer antigen 8, transcript variant X5
70. BFAR ENSGALG00000003111 1778 0.971 - - - - - - 0.971 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
71. SREBF2 ENSGALG00000041687 4519 0.971 - - - - - - 0.971 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
72. BCAS1 ENSGALG00000007796 379 0.971 - - - - - - 0.971 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
73. ATN1 ENSGALG00000014554 3270 0.97 - - - - - - 0.970 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
74. ENSGALG00000027854 ENSGALG00000027854 5007 0.97 - - - - - - 0.970 - - -
75. RRN3 ENSGALG00000041989 3934 0.97 - - - - - - 0.970 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
76. ARHGAP29 ENSGALG00000005683 3622 0.97 - - - - - - 0.970 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
77. NPHP3 ENSGALG00000034586 1465 0.97 - - - - - - 0.970 - - - nephrocystin 3, transcript variant X1
78. PPIF ENSGALG00000004809 5586 0.969 - - - - - - 0.969 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
79. MOB2 ENSGALG00000030499 3658 0.969 - - - - - - 0.969 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
80. CLCN3 ENSGALG00000009674 3704 0.968 - - - - - - 0.968 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
81. ATE1 ENSGALG00000009502 3751 0.968 - - - - - - 0.968 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
82. RBM12B ENSGALG00000035129 4314 0.968 - - - - - - 0.968 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
83. LACTB2 ENSGALG00000038745 3460 0.967 - - - - - - 0.967 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
84. POLR3E ENSGALG00000007008 4010 0.967 - - - - - - 0.967 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
85. MAP1LC3A ENSGALG00000038721 2230 0.965 - - - - - - 0.965 - - - microtubule associated protein 1 light chain 3 alpha
86. DNA2 ENSGALG00000004037 5426 0.965 - - - - - - 0.965 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
87. TMEM108 ENSGALG00000036412 2903 0.963 - - - - - - 0.963 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
88. gga-mir-6643 ENSGALG00000027935 4442 0.962 - - - - - - 0.962 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
89. ARNT2 ENSGALG00000006445 7050 0.962 - - - - - - 0.962 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
90. PPP3R1 ENSGALG00000023648 3417 0.961 - - - - - - 0.961 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
91. MOB1B ENSGALG00000011573 567 0.96 - - - - - - 0.960 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
92. NCOA4 ENSGALG00000002066 10544 0.959 - - - - - - 0.959 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
93. TBCCD1 ENSGALG00000006566 2696 0.959 - - - - - - 0.959 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
94. LATS2 4776 0.958 - - - - - - 0.958 - - - large tumor suppressor kinase 2
95. OGFOD1 6926 0.956 - - - - - - 0.956 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
96. TM9SF3 ENSGALG00000005534 15290 0.956 - - - - - - 0.956 - - - transmembrane 9 superfamily member 3
97. NDUFA9 ENSGALG00000017282 14358 0.953 - - - - - - 0.953 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
98. SCRN1 ENSGALG00000011176 3783 0.951 - - - - - - 0.951 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
99. SDF4 ENSGALG00000001872 6382 0.948 - - - - - - 0.948 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
100. POLA1 ENSGALG00000016312 9440 0.948 - - - - - - 0.948 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]

There are 531 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA