Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RAB43

Gene Name Gene ID Reads Annotation
RAB43 ENSGALG00000005021 5 RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]











Genes with expression patterns similar to RAB43

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RAB43 ENSGALG00000005021 5 4 - - 1.000 - 1.000 1.000 - 1.000 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
2. CHAT ENSGALG00000002289 26 1.877 - - - - 0.877 1.000 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
3. CAPN13 ENSGALG00000020084 6 1.696 - - 0.819 - 0.877 - - - - - calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
4. PSEN2 ENSGALG00000009073 7 1 - - - - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
5. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
6. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
7. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
8. 5S 5S 0 1 - - - - - 1.000 - - - -
9. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
10. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
11. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
12. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
13. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
14. CLDN16 ENSGALG00000025821 14 1 - - - - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
15. CCDC178 6 1 - - - - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
16. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
17. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
18. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
19. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
20. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
21. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
22. QSOX1 ENSGALG00000003933 184 1 - - - - - 1.000 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
23. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
24. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
25. FAT2 ENSGALG00000004320 4 1 - - - - - 1.000 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
26. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
27. CASS4 ENSGALG00000007744 10 1 - - - - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
28. ENSGALG00000023638 ENSGALG00000023638 16 1 - - - - - 1.000 - - - -
29. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
30. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
31. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
32. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
33. ASPR ASPR 1 1 - - - - - 1.000 - - - -
34. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
35. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
36. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
37. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
38. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
39. SYT10 ENSGALG00000012911 17 1 - - 1.000 - - - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
40. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
41. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
42. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
43. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
44. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
45. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
46. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
47. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
48. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
49. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
50. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
51. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
52. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
53. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
54. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
55. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
56. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
57. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
58. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
59. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
60. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
61. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
62. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
63. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
64. SLC25A42 ENSGALG00000002621 6 0.977 - - - - - 0.977 - - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
65. ENSGALG00000026756 ENSGALG00000026756 134 0.974 - - - - - - - 0.974 - -
66. PTPRQ ENSGALG00000010935 626 0.974 - - - - - - - 0.974 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
67. SLC30A8 ENSGALG00000034377 3 0.946 - - - - - - - 0.946 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
68. CD101 12 0.946 - - - - - - - 0.946 - - CD101 molecule, transcript variant X4
69. ENSGALG00000023353 ENSGALG00000023353 1 0.946 - - - - - - - 0.946 - -
70. CDHR1 ENSGALG00000002314 24 0.946 - - - - - - - 0.946 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
71. GP5 ENSGALG00000045125 3 0.946 - - - - - - - 0.946 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
72. GSAP ENSGALG00000008312 12 0.946 - - - - - - - 0.946 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
73. SOX10 ENSGALG00000012290 3942 0.946 - - - - - - - 0.946 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
74. ENSGALG00000028652 ENSGALG00000028652 65 0.946 - - - - - - - 0.946 - -
75. HBP1 ENSGALG00000008050 19 0.946 - - - - - - - 0.946 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
76. SUSD1 ENSGALG00000015677 12 0.946 - - - - - - - 0.946 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
77. C1orf228 3 0.946 - - - - - - - 0.946 - - chromosome 1 open reading frame 228, transcript variant X5
78. SFT2D2 ENSGALG00000019228 10 0.946 - - - - - - - 0.946 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
79. GPR17 ENSGALG00000037153 3 0.946 - - - - - - - 0.946 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
80. GABRA5 ENSGALG00000016744 12 0.946 - - - - - - - 0.946 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
81. ENSGALG00000023027 ENSGALG00000023027 5 0.946 - - - - - - - 0.946 - -
82. ACACB 6 0.946 - - - - - - - 0.946 - - acetyl-CoA carboxylase beta
83. SPATA4 ENSGALG00000010822 4 0.946 - - - - - - - 0.946 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
84. TREM-B1 ENSGALG00000003361 8 0.946 - - - - - - - 0.946 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
85. GTPBP6 ENSGALG00000016717 17 0.946 - - - - - - - 0.946 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
86. MUC13 7 0.946 - - - - - - - 0.946 - - mucin 13, cell surface associated, transcript variant X10
87. DBN1 ENSGALG00000033405 216 0.946 - - - - - - - 0.946 - - drebrin 1 [Source:NCBI gene;Acc:396496]
88. snoZ39 snoZ39 2 0.946 - - - - - - - 0.946 - -
89. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.946 - - - - - - - 0.946 - - family with sequence similarity 214 member B, transcript variant X14
90. ALKBH3 ENSGALG00000041309 7 0.946 - - - - - - - 0.946 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
91. ENSGALG00000023735 ENSGALG00000023735 12 0.943 - - - - - - - 0.943 - -
92. LOC416530 ENSGALG00000005291 207 0.943 - - - - - - - 0.943 - - uncharacterized LOC416530, transcript variant X1
93. SWAP70 ENSGALG00000005750 32 0.942 - - - - - - - 0.942 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
94. GABRA2 ENSGALG00000014206 19 0.94 - - - - - - - 0.940 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
95. LNP1 ENSGALG00000015287 14 0.938 - - - - - 0.938 - - - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
96. CCDC96 9 0.938 - - - - - 0.938 - - - - coiled-coil domain containing 96
97. MICALL2 ENSGALG00000004070 23 0.938 - - - - - 0.938 - - - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
98. ENTPD5 ENSGALG00000010202 69 0.938 - - - - - 0.938 - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
99. ECSCR ENSGALG00000024379 313 0.936 - - - - - - - 0.936 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
100. PTBP3 ENSGALG00000015669 16 0.93 - - - - - - - 0.930 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]

There are 147 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA