Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTRF

Gene Name Gene ID Reads Annotation
PTRF 7 polymerase I and transcript release factor











Genes with expression patterns similar to PTRF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTRF 7 3 - - 1.000 1.000 - 1.000 - - - - polymerase I and transcript release factor
2. SLC39A12 ENSGALG00000008602 6 1.584 - - 0.725 0.859 - - - - - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
3. ETV3 ENSGALG00000000669 7 1 - - - 1.000 - - - - - - ETS variant 3 [Source:HGNC Symbol;Acc:HGNC:3492]
4. ENSGALG00000025912 ENSGALG00000025912 4 1 - - - 1.000 - - - - - -
5. THSD1 ENSGALG00000028083 2 1 - - - 1.000 - - - - - - thrombospondin type 1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17754]
6. PIGV ENSGALG00000039883 32 1 - - - 1.000 - - - - - - phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
7. PI15 ENSGALG00000029264 21 1 - - - 1.000 - - - - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
8. MEGF9 3 1 - - - 1.000 - - - - - - multiple EGF-like-domains 9
9. PCDH7 ENSGALG00000033883 6 1 - - - 1.000 - - - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
10. ENSGALG00000011129 ENSGALG00000011129 3 1 - - - 1.000 - - - - - -
11. SPIC ENSGALG00000027209 3 1 - - - 1.000 - - - - - - Spi-C transcription factor [Source:HGNC Symbol;Acc:HGNC:29549]
12. CER1 ENSGALG00000005434 3 1 - - - 1.000 - - - - - - cerberus 1, DAN family BMP antagonist [Source:NCBI gene;Acc:395623]
13. APLNR ENSGALG00000004841 176 1 - - - 1.000 - - - - - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
14. LOC426355 ENSGALG00000028985 3 1 - - - 1.000 - - - - - - t-SNARE domain-containing protein 1-like, transcript variant X2
15. SH3D19 ENSGALG00000010081 52 1 - - - 1.000 - - - - - - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
16. CARD11 ENSGALG00000004398 58 1 - - - 1.000 - - - - - - caspase recruitment domain family member 11 [Source:NCBI gene;Acc:416476]
17. KCTD15 ENSGALG00000004907 8 1 - - - 1.000 - - - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
18. GPR34 ENSGALG00000016227 9 1 - - - 1.000 - - - - - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
19. MIP-3ALPHA MIP-3ALPHA 14 1 - - - 1.000 - - - - - -
20. C7orf72 1 1 - - - 1.000 - - - - - - chromosome 7 open reading frame 72, transcript variant X2
21. B3GALT6 ENSGALG00000001859 5 1 - - - 1.000 - - - - - - beta-1,3-galactosyltransferase 6
22. TMEM255A ENSGALG00000008604 7 1 - - - 1.000 - - - - - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
23. ENSGALG00000020753 ENSGALG00000020753 159 1 - - - 1.000 - - - - - -
24. ENSGALG00000023704 ENSGALG00000023704 2 1 - - - 1.000 - - - - - -
25. ENSGALG00000017269 ENSGALG00000017269 13 0.96 - - - - - 0.960 - - - -
26. OCM ENSGALG00000003462 6 0.96 - - - - - 0.960 - - - - oncomodulin [Source:NCBI gene;Acc:386586]
27. POMT1 ENSGALG00000003757 38 0.96 - - - - - 0.960 - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
28. OVCH2 ENSGALG00000005318 8 0.96 - - - - - 0.960 - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
29. ENSGALG00000025883 ENSGALG00000025883 6 0.96 - - - - - 0.960 - - - -
30. C16orf11 C16orf11 2 0.96 - - - - - 0.960 - - - -
31. ENSGALG00000016257 ENSGALG00000016257 4 0.96 - - - - - 0.960 - - - -
32. ENSGALG00000020459 ENSGALG00000020459 3 0.96 - - - - - 0.960 - - - -
33. SLC24A1 ENSGALG00000007495 3 0.96 - - - - - 0.960 - - - - solute carrier family 24 member 1 [Source:NCBI gene;Acc:414892]
34. NLGN3 ENSGALG00000005553 4 0.96 - - - - - 0.960 - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
35. ATP12A ENSGALG00000006469 7 0.96 - - - - - 0.960 - - - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
36. U4atac U4atac 23 0.96 - - - - - 0.960 - - - -
37. GPR6 ENSGALG00000015068 2 0.96 - - - - - 0.960 - - - - G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515]
38. SUSD4 ENSGALG00000009388 48 0.96 - - - - - 0.960 - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
39. GHSR ENSGALG00000027947 24 0.96 - - - - - 0.960 - - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
40. BEGAIN ENSGALG00000011236 35 0.96 - - - - - 0.960 - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
41. LRRC47 7 0.96 - - - - - 0.960 - - - - leucine rich repeat containing 47
42. ENSGALG00000009227 ENSGALG00000009227 2 0.96 - - - - - 0.960 - - - -
43. ADAMTS15 ENSGALG00000001407 11 0.959 - - - 0.959 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
44. OR14I1 OR14I1 14 0.958 - - - - - 0.958 - - - -
45. NIPA1 ENSGALG00000039811 20 0.958 - - - - - 0.958 - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
46. CAPN6 ENSGALG00000008006 16 0.957 - - - - - 0.957 - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
47. GNAI1 ENSGALG00000008382 195 0.952 - - - - - 0.952 - - - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
48. ZNF22 ZNF22 25 0.95 - - - - - 0.950 - - - -
49. ENSGALG00000023463 ENSGALG00000023463 2 0.949 - - - - - 0.949 - - - -
50. OSTF1 ENSGALG00000017447 39 0.946 - - - - - 0.946 - - - - osteoclast stimulating factor 1 [Source:NCBI gene;Acc:427258]
51. IL20RA ENSGALG00000013869 15 0.945 - - - - - 0.945 - - - - interleukin 20 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6003]
52. ENSGALG00000018621 ENSGALG00000018621 8 0.945 - - - - - 0.945 - - - -
53. UBE2L6 ENSGALG00000046098 393 0.933 - - - - - 0.933 - - - - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
54. MDM4 ENSGALG00000000636 91 0.932 - - - - - 0.932 - - - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
55. TRPC6 ENSGALG00000029416 281 0.932 - - - - - 0.932 - - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
56. CHRNA3 ENSGALG00000003014 6 0.931 - - - - - 0.931 - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
57. JADE3 ENSGALG00000016727 55 0.93 - - - - - 0.930 - - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
58. PIGM ENSGALG00000010768 41 0.93 - - - - - 0.930 - - - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
59. NUDT2 ENSGALG00000027295 15 0.93 - - - - - 0.930 - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
60. SLAMF8 ENSGALG00000027712 39 0.927 - - - - - 0.927 - - - - SLAM family member 8 [Source:NCBI gene;Acc:768588]
61. CNNM1 ENSGALG00000007489 43 0.927 - - - 0.927 - - - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
62. PDGFRL ENSGALG00000013617 11 0.926 - - - - - 0.926 - - - - platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805]
63. HACL1 ENSGALG00000011211 51 0.915 - - - - - 0.915 - - - - 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
64. DNAH3 ENSGALG00000002350 194 0.915 - - - - - 0.915 - - - - dynein axonemal heavy chain 3 [Source:HGNC Symbol;Acc:HGNC:2949]
65. C2CD3 ENSGALG00000017314 13 0.913 - - - - - 0.913 - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
66. SLC20A1 ENSGALG00000013740 40 0.91 - - - - - 0.910 - - - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
67. BSDC1 ENSGALG00000003405 3701 0.91 - - - - - 0.910 - - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
68. RSFR 61 0.903 - - - - - 0.903 - - - - leukocyte ribonuclease A-2
69. SLC35A5 11 0.902 - - - - - 0.902 - - - - solute carrier family 35 member A5, transcript variant X6
70. MOGAT2 ENSGALG00000014170 10 0.899 - - - - - 0.899 - - - - monoacylglycerol O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:23248]
71. TIMD4 ENSGALG00000003876 61 0.899 - - - - - 0.899 - - - - T-cell immunoglobulin and mucin domain containing 4 [Source:NCBI gene;Acc:416250]
72. LRRIQ1 147 0.893 - - - - - 0.893 - - - - leucine rich repeats and IQ motif containing 1, transcript variant X2
73. DYNC2LI1 ENSGALG00000009954 38 0.889 - - - - - 0.889 - - - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
74. PLEKHJ1 ENSGALG00000000835 55 0.886 - - - - - 0.886 - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
75. WDR78 ENSGALG00000045792 6 0.884 - - - - - 0.884 - - - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
76. NEU2 ENSGALG00000037467 34 0.883 - - 0.883 - - - - - - - neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
77. ADSSL1 ENSGALG00000011618 85 0.883 - - - - - 0.883 - - - - adenylosuccinate synthase like 1 [Source:HGNC Symbol;Acc:HGNC:20093]
78. TACR3 ENSGALG00000010596 31 0.88 - - - - - 0.880 - - - - Gallus gallus tachykinin receptor 3 (TACR3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318454]
79. RC3H2 ENSGALG00000001253 18 0.874 - - - - - 0.874 - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
80. RFX7 ENSGALG00000041896 69 0.871 - - - - - 0.871 - - - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
81. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 0.869 - - - - - 0.869 - - - - MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
82. GLP2R ENSGALG00000041800 10 0.869 - - - - - 0.869 - - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
83. MRVI1 ENSGALG00000005632 450 0.863 - - - - - 0.863 - - - - murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
84. GNG4 ENSGALG00000010986 23 0.862 - - - - - 0.862 - - - - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
85. ARHGAP27 376 0.86 - - - - - 0.860 - - - - Rho GTPase activating protein 27, transcript variant X4
86. SNAP29 ENSGALG00000040128 3581 0.859 - - - - - 0.859 - - - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
87. PHEX ENSGALG00000016375 4 0.853 - - - 0.853 - - - - - - phosphate regulating endopeptidase homolog, X-linked [Source:NCBI gene;Acc:395777]
88. PDZK1IP1 ENSGALG00000010473 551 0.851 - - - - - 0.851 - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
89. NMRAL1 ENSGALG00000029820 29 0.848 - - - - - 0.848 - - - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
90. CATHL1 ENSGALG00000027973 98 0.841 - - - - - 0.841 - - - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
91. SLC16A9 ENSGALG00000003172 266 0.839 - - - - - 0.839 - - - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
92. CL2 ENSGALG00000011455 87 0.839 - - - - - 0.839 - - - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
93. VAT1L ENSGALG00000013225 3 0.834 - - - 0.834 - - - - - - vesicle amine transport 1 like [Source:HGNC Symbol;Acc:HGNC:29315]
94. ESR2 ENSGALG00000011801 7 0.834 - - - 0.834 - - - - - - estrogen receptor 2 [Source:NCBI gene;Acc:395575]
95. ASXL3 ENSGALG00000015196 1137 0.829 - - - - - 0.829 - - - - ASXL transcriptional regulator 3 [Source:HGNC Symbol;Acc:HGNC:29357]
96. DLX3 ENSGALG00000040529 37 0.829 - - - - - 0.829 - - - - Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
97. FNDC7 ENSGALG00000001983 24 0.827 - - - 0.827 - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
98. HMGCLL1 ENSGALG00000016294 33 0.818 - - - - - 0.818 - - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
99. ABCC4 ENSGALG00000016896 154 0.812 - - - - - 0.812 - - - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
100. BDH1 ENSGALG00000023601 8466 0.812 - - - - - 0.812 - - - - 3-hydroxybutyrate dehydrogenase, type 1

There are 75 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA