Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMC6

Gene Name Gene ID Reads Annotation
PSMC6 ENSGALG00000012408 52068 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]











Genes with expression patterns similar to PSMC6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMC6 ENSGALG00000012408 52068 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
2. ZNF639 ENSGALG00000005944 6387 1.698 - - - - 0.935 - - - - 0.763 zinc finger protein 639 [Source:NCBI gene;Acc:425280]
3. ABCF2 ENSGALG00000034573 15639 1.603 - - - - 0.778 - 0.825 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
4. FAM98A ENSGALG00000010428 9585 1.521 - - - - 0.804 - 0.717 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
5. NUP37 ENSGALG00000012759 9985 1.514 - - - - 0.807 - 0.707 - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
6. NDUFB6 ENSGALG00000002033 45494 1.499 - - - - - - 0.797 - 0.702 - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
7. DUT ENSGALG00000038032 34659 0.954 - - - - 0.954 - - - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
8. RAB7A ENSGALG00000005902 28565 0.947 - - - - 0.947 - - - - - RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9788]
9. DCTN3 ENSGALG00000021365 22839 0.945 - - - - 0.945 - - - - - dynactin subunit 3 [Source:NCBI gene;Acc:427404]
10. UBE2I ENSGALG00000006428 18421 0.944 - - - - 0.944 - - - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
11. ZFHX3 ENSGALG00000000713 2340 0.938 - - - - 0.938 - - - - - zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
12. NGFR ENSGALG00000035950 13452 0.927 - - - - 0.927 - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
13. HSPA9 ENSGALG00000002363 31172 0.895 - - - - - - 0.895 - - - heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
14. DYNLT1 ENSGALG00000019979 38176 0.887 - - - - - - 0.887 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
15. CSNK2A1 ENSGALG00000006197 41409 0.878 - - - - - - 0.878 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
16. CLTA ENSGALG00000015326 26867 0.871 - - - - 0.871 - - - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
17. OLA1 ENSGALG00000009325 26414 0.852 - - - - - - 0.852 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
18. SYNCRIP ENSGALG00000015830 30555 0.852 - - - - 0.852 - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
19. ATP5F1 80590 0.844 - - - - - - 0.844 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
20. TRAPPC2L ENSGALG00000006250 21772 0.843 - - - - 0.843 - - - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
21. VCP ENSGALG00000001986 23679 0.84 - - - - - - 0.840 - - - valosin containing protein [Source:NCBI gene;Acc:427410]
22. SEC31A ENSGALG00000040484 20190 0.839 - - - - - - 0.839 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
23. ARHGDIB ENSGALG00000011738 39492 0.832 - - - - - - 0.832 - - - Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
24. TAX1BP3 ENSGALG00000004618 35172 0.83 - - - - 0.830 - - - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
25. RPL22L1 ENSGALG00000009312 59030 0.822 - - - - - - 0.822 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
26. RPL21 ENSGALG00000027035 244232 0.821 - - - - - - 0.821 - - - ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
27. ENSGALG00000012158 ENSGALG00000012158 11937 0.819 - - - - - - 0.819 - - -
28. TM2D2 ENSGALG00000003356 7088 0.818 - - - - 0.818 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
29. NDST2 ENSGALG00000005107 4224 0.817 - - - - 0.817 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
30. gga-mir-6584 ENSGALG00000028834 1481 0.817 - - - - 0.817 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
31. NSG1 ENSGALG00000015010 5829 0.816 - - - - 0.816 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
32. MRPL22 ENSGALG00000003919 2760 0.816 - - - - 0.816 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
33. HTRA3 ENSGALG00000034673 512 0.816 - - - - 0.816 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
34. MYEOV2 MYEOV2 5155 0.816 - - - - 0.816 - - - - -
35. EIF4E ENSGALG00000042112 27720 0.816 - - - - - - 0.816 - - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
36. WHSC1L1 4065 0.815 - - - - 0.815 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
37. M6PR ENSGALG00000031681 9442 0.815 - - - - 0.815 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
38. HOXB3 ENSGALG00000043219 5198 0.815 - - - - 0.815 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
39. MRPL46 ENSGALG00000006782 5033 0.815 - - - - 0.815 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
40. SEC61A2 ENSGALG00000036300 4235 0.815 - - - - 0.815 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
41. RNF113A ENSGALG00000000538 3985 0.814 - - - - 0.814 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
42. OPTC ENSGALG00000003554 3698 0.814 - - - - 0.814 - - - - - opticin [Source:NCBI gene;Acc:395130]
43. RSU1 ENSGALG00000040891 12561 0.814 - - - - - - 0.814 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
44. EPB41L1 ENSGALG00000034171 3616 0.813 - - - - 0.813 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
45. TRIM33 ENSGALG00000001976 7404 0.813 - - - - 0.813 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
46. RAE1 ENSGALG00000007653 8930 0.813 - - - - 0.813 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
47. NOL6 ENSGALG00000030730 7191 0.813 - - - - 0.813 - - - - - nucleolar protein 6
48. CCDC59 ENSGALG00000028648 9272 0.813 - - - - 0.813 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
49. TBC1D7 ENSGALG00000012731 4891 0.813 - - - - 0.813 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
50. VPS8 ENSGALG00000006704 5419 0.813 - - - - 0.813 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
51. PHKA1 ENSGALG00000004801 2510 0.813 - - - - 0.813 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
52. HYOU1 ENSGALG00000007659 3555 0.812 - - - - 0.812 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
53. PPAPDC1B PPAPDC1B 6698 0.812 - - - - 0.812 - - - - -
54. ATP5H 53898 0.812 - - - - - - 0.812 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
55. ABCC1 ENSGALG00000006646 2596 0.812 - - - - 0.812 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
56. MED1 ENSGALG00000001708 9556 0.812 - - - - 0.812 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
57. TMEM39B ENSGALG00000003287 4125 0.811 - - - - 0.811 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
58. BCL9 ENSGALG00000037655 4620 0.811 - - - - 0.811 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
59. THOC7 ENSGALG00000007299 38227 0.811 - - - - - - 0.811 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
60. MAP1B ENSGALG00000014999 6288 0.811 - - - - 0.811 - - - - - microtubule associated protein 1B
61. C15H12ORF49 C15H12ORF49 13250 0.81 - - - - 0.810 - - - - -
62. TMEM18 ENSGALG00000028744 11779 0.81 - - - - 0.810 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
63. USP1 ENSGALG00000010957 8297 0.81 - - - - 0.810 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
64. KCTD9 ENSGALG00000000275 3455 0.81 - - - - 0.810 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
65. MRPS11 ENSGALG00000006777 16009 0.81 - - - - 0.810 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
66. C4orf27 C4orf27 16724 0.809 - - - - 0.809 - - - - -
67. TNPO3 ENSGALG00000039420 5178 0.809 - - - - 0.809 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
68. AGPAT3 ENSGALG00000031932 6903 0.809 - - - - 0.809 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
69. SAMM50 ENSGALG00000014194 20437 0.809 - - - - 0.809 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
70. CENPE ENSGALG00000013208 12337 0.809 - - - - 0.809 - - - - - centromere protein E, transcript variant X4
71. RAB21 ENSGALG00000010183 7718 0.809 - - - - 0.809 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
72. HMGB3 ENSGALG00000009071 12011 0.808 - - - - 0.808 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
73. DNAJC2 ENSGALG00000008249 28064 0.808 - - - - 0.808 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
74. THBS1 ENSGALG00000009626 3521 0.807 - - - - 0.807 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
75. IBA57 ENSGALG00000005328 4362 0.807 - - - - 0.807 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
76. BCCIP ENSGALG00000006617 13291 0.805 - - - - - - 0.805 - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
77. MCM4 ENSGALG00000012915 13151 0.805 - - - - 0.805 - - - - - minichromosome maintenance complex component 4
78. SPG21 ENSGALG00000007262 8050 0.805 - - - - 0.805 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
79. EXOSC2 ENSGALG00000040373 24275 0.805 - - - - - - 0.805 - - - exosome component 2 [Source:NCBI gene;Acc:417182]
80. LUC7L2 ENSGALG00000036238 11817 0.805 - - - - 0.805 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
81. PKM ENSGALG00000001992 93960 0.804 - - - - 0.804 - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
82. UQCRC2 ENSGALG00000002490 23477 0.802 - - - - 0.802 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
83. ESRP2 ENSGALG00000003374 4436 0.802 - - - - 0.802 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
84. ENSGALG00000028938 ENSGALG00000028938 18616 0.802 - - - - - - 0.802 - - -
85. MORN4 ENSGALG00000006149 7772 0.802 - - - - 0.802 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
86. PGAM5 ENSGALG00000002137 7700 0.801 - - - - 0.801 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
87. TBRG4 ENSGALG00000038102 9269 0.801 - - - - 0.801 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
88. INCENP ENSGALG00000007537 16617 0.801 - - - - 0.801 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
89. RALB ENSGALG00000026493 14590 0.8 - - - - 0.800 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
90. ETF1 ENSGALG00000002262 14560 0.8 - - - - 0.800 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
91. RILPL2 ENSGALG00000003321 5632 0.8 - - - - 0.800 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
92. CREPT CREPT 17142 0.799 - - - - 0.799 - - - - -
93. PPP4R2 ENSGALG00000007810 15127 0.798 - - - - - - 0.798 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
94. SEC63 ENSGALG00000015308 11596 0.797 - - - - 0.797 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
95. OAF ENSGALG00000006715 12518 0.796 - - - - 0.796 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
96. BCAS2 ENSGALG00000002002 22536 0.792 - - - - - - 0.792 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
97. LSM5 ENSGALG00000041625 22307 0.792 - - - - 0.792 - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
98. MAEA ENSGALG00000013310 13230 0.792 - - - - - - 0.792 - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
99. MTF2 ENSGALG00000043087 15225 0.791 - - - - 0.791 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
100. RBM26 ENSGALG00000016910 13769 0.79 - - - - 0.790 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]

There are 157 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA