Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMB3

Gene Name Gene ID Reads Annotation
PSMB3 ENSGALG00000001597 22588 proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]











Genes with expression patterns similar to PSMB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMB3 ENSGALG00000001597 22588 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
2. FAM96B 14435 1.675 - - - - - - 0.841 0.834 - - family with sequence similarity 96 member B
3. GFM1 ENSGALG00000009634 7213 1.621 - - - - - - 0.764 0.857 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
4. NARS ENSGALG00000040506 9506 1.597 - - - - - - 0.813 0.784 - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
5. SDF4 ENSGALG00000001872 6382 1.579 - - - - - - 0.854 0.725 - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
6. CCND1 ENSGALG00000007555 6715 1.563 - - - - - - 0.790 0.773 - - cyclin D1 [Source:NCBI gene;Acc:396341]
7. COPE ENSGALG00000003153 19444 1.553 - - - - - - 0.834 0.719 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
8. POLR3E ENSGALG00000007008 4010 1.541 - - - - - - 0.775 0.766 - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
9. DPY30 ENSGALG00000010621 6818 1.529 - - 0.705 - - - - 0.824 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
10. PSMB1 ENSGALG00000011174 40689 1.513 - - - - 0.747 - 0.766 - - - proteasome subunit beta 1 [Source:NCBI gene;Acc:421551]
11. ARHGAP29 ENSGALG00000005683 3622 1.486 - - - - - - 0.752 0.734 - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
12. XPA ENSGALG00000028998 8621 1.482 - - - - - - 0.755 0.727 - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
13. CLCN3 ENSGALG00000009674 3704 1.456 - - - - - - 0.749 0.707 - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
14. ARPC4 ENSGALG00000006691 33311 1.455 - - - - - - 0.711 0.744 - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
15. INTS10 ENSGALG00000010130 6320 1.454 - - - - - - 0.751 0.703 - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
16. PEBP1 ENSGALG00000007403 77502 0.939 - - - - - - 0.939 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
17. STK4 ENSGALG00000004098 11366 0.931 - - - - - - 0.931 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
18. TCP1 ENSGALG00000011637 73216 0.931 - - - - - - 0.931 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
19. CNOT7 ENSGALG00000013649 23435 0.927 - - - - - - 0.927 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
20. HN1 HN1 34386 0.923 - - - - - - 0.923 - - -
21. UBR7 ENSGALG00000010842 16488 0.917 - - - - - - 0.917 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
22. NDUFS6 ENSGALG00000013191 15874 0.907 - - - - - - 0.907 - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
23. NRD1 NRD1 10827 0.902 - - - - - - 0.902 - - -
24. GABPA ENSGALG00000015763 11567 0.897 - - - - - - 0.897 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
25. PSMA6 ENSGALG00000010060 26517 0.897 - - - - - - 0.897 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
26. VMP1 ENSGALG00000005160 12859 0.896 - - - - - - 0.896 - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
27. C11H16ORF80 C11H16ORF80 18673 0.895 - - - - - - - 0.895 - -
28. DAD1 ENSGALG00000035626 32604 0.891 - - - - - - - 0.891 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
29. HSCB ENSGALG00000005706 12953 0.891 - - - - - - - 0.891 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
30. URM1 ENSGALG00000004971 17880 0.888 - - - - - - - 0.888 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
31. BPNT1 ENSGALG00000009576 7445 0.884 - - - - - - - 0.884 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
32. MRPL19 ENSGALG00000016731 22670 0.884 - - - - - - 0.884 - - - mitochondrial ribosomal protein L19, transcript variant X1
33. YRDC ENSGALG00000029001 6529 0.884 - - - - - - - 0.884 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
34. SOD2 ENSGALG00000011661 13178 0.884 - - - - - - 0.884 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
35. MAEA ENSGALG00000013310 13230 0.883 - - - - - - - 0.883 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
36. LAP3 ENSGALG00000006334 21076 0.88 - - - - - - 0.880 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
37. WBP11 ENSGALG00000011745 11182 0.874 - - - - - - 0.874 - - - WW domain binding protein 11, transcript variant X1
38. NDUFB10 ENSGALG00000005465 41984 0.874 - - - - - - 0.874 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
39. ARL6IP5 ENSGALG00000038904 12956 0.873 - - - - - - 0.873 - - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
40. SFT2D1 ENSGALG00000020005 10855 0.873 - - - - - - 0.873 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
41. PTBP1 ENSGALG00000001962 66983 0.873 - - - - - - 0.873 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
42. PSMC2 ENSGALG00000008236 25980 0.872 - - - - - - 0.872 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
43. PMM2 ENSGALG00000007326 8260 0.872 - - - - - - 0.872 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
44. MINOS1 ENSGALG00000004039 37740 0.872 - - - - - - 0.872 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
45. STX2 ENSGALG00000002536 10438 0.87 - - - - - - 0.870 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
46. KIF20A ENSGALG00000035030 10249 0.868 - - - - - - 0.868 - - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
47. TP53BP2 ENSGALG00000042816 12368 0.867 - - - - - - 0.867 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
48. SF3A3 ENSGALG00000001540 9664 0.867 - - - - - - 0.867 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
49. BZW2 ENSGALG00000010809 29213 0.866 - - - - - - - 0.866 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
50. UPF1 ENSGALG00000003220 9496 0.865 - - - - - - 0.865 - - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
51. C1H11ORF73 C1H11ORF73 10071 0.864 - - - - - - - 0.864 - -
52. CHMP4B ENSGALG00000002095 17422 0.864 - - - - - - - 0.864 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
53. NDUFA12 ENSGALG00000011325 19807 0.864 - - - - - - - 0.864 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
54. CLPTM1L ENSGALG00000013187 9733 0.861 - - - - - - 0.861 - - - CLPTM1 like [Source:NCBI gene;Acc:420973]
55. GCSH ENSGALG00000032679 29231 0.86 - - - - - - - 0.860 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
56. PTPMT1 ENSGALG00000008091 6160 0.859 - - - - - - - 0.859 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
57. PSMD10 ENSGALG00000008287 11380 0.859 - - - - - - - 0.859 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
58. NAA25 ENSGALG00000041821 12729 0.856 - - - - - - 0.856 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
59. ACP1 ENSGALG00000016363 10636 0.856 - - - - - - - 0.856 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
60. TMEM258 ENSGALG00000038292 31116 0.855 - - - - - - - 0.855 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
61. PRMT3 ENSGALG00000003958 14160 0.855 - - - - - - 0.855 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
62. POR ENSGALG00000002053 5223 0.854 - - - - - - 0.854 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
63. BLMH ENSGALG00000004259 36907 0.854 - - - - - - - 0.854 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
64. MSH6 ENSGALG00000008957 6396 0.853 - - - - - - - 0.853 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
65. EMC3 ENSGALG00000003738 10363 0.852 - - - - - - - 0.852 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
66. TALDO1 ENSGALG00000037195 30673 0.852 - - - - - - 0.852 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
67. CNI CNI 18453 0.852 - - - - - - - 0.852 - -
68. ACAA2 ENSGALG00000031142 29220 0.849 - - - - - - 0.849 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
69. SLC25A17 ENSGALG00000012013 13948 0.849 - - - - - - - 0.849 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
70. ID2 ENSGALG00000035016 22120 0.848 - - - - - - 0.848 - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
71. TBP ENSGALG00000011171 5759 0.848 - - - - - - - 0.848 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
72. MRPL44 ENSGALG00000003067 15256 0.847 - - - - - - 0.847 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
73. PEPD ENSGALG00000004899 9785 0.847 - - - - - - 0.847 - - - peptidase D [Source:NCBI gene;Acc:415776]
74. TDP2 ENSGALG00000013637 6595 0.846 - - - - - - - 0.846 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
75. MRE11A MRE11A 5754 0.845 - - - - - - 0.845 - - -
76. ERLIN2 ENSGALG00000003092 18251 0.845 - - - - - - - 0.845 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
77. ZMYND11 ENSGALG00000006599 5740 0.845 - - - - - - 0.845 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
78. ARG2 ENSGALG00000009519 19523 0.844 - - - - - - - 0.844 - - arginase 2 [Source:NCBI gene;Acc:423272]
79. PLK1 ENSGALG00000006110 12892 0.842 - - - - - - - 0.842 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
80. EIF5B ENSGALG00000016764 30681 0.841 - - - - - - - 0.841 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
81. TRAPPC6B ENSGALG00000010157 7567 0.84 - - - - - - - 0.840 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
82. RCN2 ENSGALG00000039284 17848 0.84 - - - - - - - 0.840 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
83. PSMD7 ENSGALG00000000707 26350 0.839 - - - - - - - 0.839 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
84. DYNC1LI1 ENSGALG00000011491 11011 0.839 - - - - - - 0.839 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
85. MGST1 ENSGALG00000013098 17632 0.838 - - - - - - 0.838 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
86. RCC2 ENSGALG00000031684 28067 0.838 - - - - - - 0.838 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
87. ENSGALG00000007509 ENSGALG00000007509 18441 0.838 - - - - - - 0.838 - - -
88. HOXA5 ENSGALG00000025929 6231 0.838 - - - - - - - 0.838 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
89. PSMD13 ENSGALG00000043684 14720 0.837 - - - - - - - 0.837 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
90. TM4SF18 4553 0.837 - - - - - - - 0.837 - - transmembrane 4 L six family member 18, transcript variant X2
91. SNRPC ENSGALG00000002773 21965 0.836 - - - - - - - 0.836 - - small nuclear ribonucleoprotein polypeptide C [Source:NCBI gene;Acc:419901]
92. MAGOH 28688 0.836 - - - - - - 0.836 - - - mago homolog, exon junction complex core component
93. SREK1 ENSGALG00000014775 13961 0.833 - - - - - - - 0.833 - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
94. HDGFL3 ENSGALG00000006036 13576 0.832 - - - - - - 0.832 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
95. COX7A2L ENSGALG00000037996 13646 0.832 - - - - - - 0.832 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
96. TRAM1 ENSGALG00000041112 22876 0.832 - - - - - - 0.832 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
97. MRPS22 ENSGALG00000005367 8307 0.832 - - - - - - - 0.832 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
98. GPR161 ENSGALG00000015247 3473 0.831 - - - - - - - 0.831 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
99. NDUFS5 ENSGALG00000003625 27698 0.829 - - - - - - - 0.829 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
100. SRP14 ENSGALG00000009592 17828 0.829 - - - - - - - 0.829 - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]

There are 560 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA