Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLR2B

Gene Name Gene ID Reads Annotation
POLR2B ENSGALG00000011387 4864 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]











Genes with expression patterns similar to POLR2B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR2B ENSGALG00000011387 4864 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
2. SSR2 ENSGALG00000000764 32190 2.613 - - - - 0.983 - - 0.774 - 0.856 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
3. EAPP ENSGALG00000010007 5080 1.787 - - - - 0.988 - - - - 0.799 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
4. ATG5 ENSGALG00000015387 7752 1.777 - - - - 0.987 - 0.790 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
5. TMEM165 ENSGALG00000027886 5468 1.76 - - - - 0.976 - - - - 0.784 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
6. PNRC2 ENSGALG00000004122 19228 1.753 - - - - 0.941 - - - - 0.812 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
7. RANGAP1 ENSGALG00000011966 20170 1.751 - - - - 0.954 - 0.797 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
8. POLR3F ENSGALG00000008749 5645 1.75 - - - - 0.977 - - 0.773 - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
9. COIL ENSGALG00000003158 7806 1.743 - - - - 0.984 - - 0.759 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
10. SAR1B ENSGALG00000038753 6493 1.74 - - - - 0.971 - 0.769 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
11. NOP58 ENSGALG00000008454 34630 1.74 - - - - 0.978 - 0.762 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
12. TRAPPC12 ENSGALG00000016387 2593 1.73 - - - - 0.985 - - - - 0.745 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
13. PLAA ENSGALG00000001782 5459 1.726 - - - - 0.975 - 0.751 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
14. CBWD1 ENSGALG00000010147 2765 1.724 - - - - 0.987 - 0.737 - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
15. TK2 ENSGALG00000034216 5394 1.717 - - - - 0.975 - 0.742 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
16. SKP2 ENSGALG00000003547 14637 1.71 - - - - 0.946 - 0.764 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
17. PTTG1 17936 1.709 - - - - 0.957 - 0.752 - - - pituitary tumor-transforming 1, transcript variant X1
18. METTL23 ENSGALG00000001790 7906 1.709 - - - - 0.928 - 0.781 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
19. LY6E ENSGALG00000041621 16227 1.704 - - - - 0.936 - - - - 0.768 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
20. IGBP1 ENSGALG00000044628 9200 1.7 - - - - 0.985 - 0.715 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
21. PCBP4 ENSGALG00000027695 7937 1.694 - - - - 0.967 - - 0.727 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
22. PSPC1 ENSGALG00000017142 13036 1.685 - - - - 0.968 - 0.717 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
23. RAB12 ENSGALG00000033608 14160 1.673 - - - - 0.945 - - - - 0.728 RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
24. SMC4 ENSGALG00000009553 15715 1.595 - - - - - - 0.864 - - 0.731 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
25. CCNC ENSGALG00000015471 6497 1.594 - - - - - - 0.836 0.758 - - cyclin C [Source:NCBI gene;Acc:421791]
26. USP10 ENSGALG00000005674 7768 1.593 - - - - 0.810 - - - - 0.783 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
27. R3HDM1 ENSGALG00000012246 6580 1.59 - - - - - - 0.834 0.756 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
28. MOB3A ENSGALG00000031729 9690 1.584 - - - - - - - 0.789 - 0.795 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
29. COX17 ENSGALG00000014981 5646 1.569 - - - - - - 0.747 - - 0.822 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
30. HSPA4 ENSGALG00000040882 20966 1.559 - - - - - - 0.832 - - 0.727 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
31. FBXO5 ENSGALG00000013607 6156 1.556 - - - - - - 0.757 - - 0.799 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
32. HOXA5 ENSGALG00000025929 6231 1.554 - - - - - - 0.756 - - 0.798 homeobox A5 [Source:NCBI gene;Acc:100858404]
33. RFC1 ENSGALG00000014298 6516 1.549 - - - - - - 0.809 0.740 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
34. CTSL2 CTSL2 7966 1.541 - - - - - - 0.771 0.770 - -
35. HNRNPD ENSGALG00000011184 10686 1.539 - - - - - - 0.727 - - 0.812 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
36. TAF2 ENSGALG00000043193 6311 1.538 - - - - - - 0.780 0.758 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
37. CHMP4B ENSGALG00000002095 17422 1.533 - - - - - - - 0.731 - 0.802 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
38. ATP5A1 ATP5A1 32367 1.533 - - - - 0.810 - - 0.723 - -
39. ODZ3 ODZ3 2213 1.533 - - - - - - - 0.753 - 0.780
40. COBRA1 COBRA1 4600 1.528 - - - - - - 0.803 0.725 - -
41. NEO1 ENSGALG00000001774 10165 1.528 - - - - - - 0.777 - - 0.751 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
42. CCNDBP1 ENSGALG00000004837 11520 1.523 - - - - - - 0.784 0.739 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
43. WDR53 ENSGALG00000006395 4938 1.52 - - - - - - 0.769 - - 0.751 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
44. C11H16ORF80 C11H16ORF80 18673 1.519 - - - - - - 0.774 0.745 - -
45. GPR162 ENSGALG00000022926 7181 1.518 - - - - - - 0.702 0.816 - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
46. RPS17 ENSGALG00000002157 142120 1.515 - - - - 0.731 - 0.784 - - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
47. CENPK ENSGALG00000014753 12414 1.514 - - - - - - 0.703 0.811 - - centromere protein K [Source:NCBI gene;Acc:427162]
48. RAB11A ENSGALG00000007615 9154 1.507 - - - - 0.744 - 0.763 - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
49. KRR1 ENSGALG00000010227 11783 1.504 - - - - 0.711 - 0.793 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
50. ADI1 ENSGALG00000025796 8636 1.504 - - - - - - 0.728 0.776 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
51. LSM6 ENSGALG00000009985 18582 1.503 - - - - - - 0.770 - - 0.733 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
52. ERCC6 ENSGALG00000006254 3452 1.502 - - - - - - 0.769 - - 0.733 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
53. FANCL ENSGALG00000030022 7423 1.502 - - - - - - 0.761 - - 0.741 FA complementation group L [Source:NCBI gene;Acc:421202]
54. FNBP1L ENSGALG00000005850 9219 1.502 - - - - - - 0.745 - - 0.757 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
55. NUP85 ENSGALG00000007974 21249 1.497 - - - - - - 0.797 0.700 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
56. PPFIA1 ENSGALG00000035774 5258 1.496 - - - - - - 0.714 - - 0.782 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
57. RPF2 ENSGALG00000037087 12788 1.496 - - - - - - 0.720 - - 0.776 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
58. CIB1 ENSGALG00000008302 13946 1.495 - - - - - - 0.768 - - 0.727 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
59. QDPR ENSGALG00000030070 6953 1.492 - - - - - - 0.777 - - 0.715 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
60. PCNT ENSGALG00000007021 6428 1.491 - - - - - - 0.774 0.717 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
61. AZIN1 ENSGALG00000029295 11085 1.489 - - - - - - 0.731 0.758 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
62. TIMM8A ENSGALG00000004963 14263 1.487 - - - - - - 0.702 0.785 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
63. ATP6AP1 ENSGALG00000008836 4343 1.483 - - - - - - 0.701 0.782 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
64. DAD1 ENSGALG00000035626 32604 1.477 - - - - - - 0.746 0.731 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
65. ADRM1 ENSGALG00000005200 5417 1.475 - - - - - - 0.736 0.739 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
66. MRPL50 ENSGALG00000015543 11649 1.473 - - - - - - 0.708 - - 0.765 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
67. ENSGALG00000009044 ENSGALG00000009044 14492 1.47 - - - - - - 0.742 - - 0.728
68. UCHL3 ENSGALG00000016921 16208 1.469 - - - - - - 0.767 - - 0.702 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
69. QTRTD1 QTRTD1 10765 1.467 - - - - - - 0.753 0.714 - -
70. ERBB2IP ERBB2IP 5800 1.466 - - - - - - 0.745 - - 0.721
71. RCN2 ENSGALG00000039284 17848 1.463 - - - - - - 0.703 0.760 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
72. RAB10 ENSGALG00000016535 5272 1.461 - - - - - - 0.751 - - 0.710 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
73. DCPS ENSGALG00000031143 10191 1.459 - - - - - - 0.752 0.707 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
74. MAEA ENSGALG00000013310 13230 1.453 - - - - 0.725 - - 0.728 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
75. FAM177A1 ENSGALG00000010046 4318 1.452 - - - - - - 0.734 0.718 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
76. GPBP1 ENSGALG00000014724 5454 1.45 - - - - - - 0.711 - - 0.739 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
77. MFAP1 ENSGALG00000028295 6043 1.449 - - - - - - 0.710 0.739 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
78. DDX10 ENSGALG00000017156 5657 1.448 - - - - - - 0.733 0.715 - - DEAD-box helicase 10 [Source:NCBI gene;Acc:418965]
79. CSRP2BP CSRP2BP 4679 1.448 - - - - - - - 0.721 - 0.727
80. CDK2AP1 ENSGALG00000034919 5469 1.447 - - - - - - 0.709 0.738 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
81. CNI CNI 18453 1.446 - - - - - - 0.710 0.736 - -
82. gga-mir-6587 ENSGALG00000026386 9441 1.445 - - - - - - 0.734 - - 0.711 gga-mir-6587 [Source:miRBase;Acc:MI0022407]
83. GCSH ENSGALG00000032679 29231 1.439 - - - - - - - 0.706 - 0.733 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
84. STRADA ENSGALG00000000550 6912 1.434 - - - - - - 0.703 - - 0.731 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
85. PCNP ENSGALG00000015330 15750 1.432 - - - - - - 0.731 - - 0.701 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
86. UBFD1 ENSGALG00000006117 5242 1.427 - - - - - - 0.707 0.720 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
87. FKBP7 ENSGALG00000009149 6742 1.427 - - - - - - 0.724 0.703 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
88. LSG1 ENSGALG00000007058 4591 1.424 - - - - - - 0.709 0.715 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
89. TMED7 ENSGALG00000028484 21008 1.418 - - - - - - 0.716 - - 0.702 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
90. ANKRD46 ENSGALG00000041445 3791 1.416 - - - - - - 0.706 - - 0.710 ankyrin repeat domain 46, transcript variant X1
91. SSPN ENSGALG00000014042 638 0.989 - - - - 0.989 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
92. KNOP1 ENSGALG00000002042 6251 0.989 - - - - 0.989 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
93. ENSGALG00000011687 ENSGALG00000011687 4553 0.989 - - - - 0.989 - - - - -
94. REST 2394 0.988 - - - - 0.988 - - - - - RE1 silencing transcription factor
95. IGF1R ENSGALG00000040651 772 0.988 - - - - 0.988 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
96. STK3 ENSGALG00000032850 6339 0.988 - - - - 0.988 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
97. XPO7 ENSGALG00000001838 1875 0.988 - - - - 0.988 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
98. ZBTB10 ENSGALG00000034376 3271 0.988 - - - - 0.988 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
99. ELL2 ENSGALG00000014678 1111 0.988 - - - - 0.988 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
100. CTSZ ENSGALG00000007462 630 0.988 - - - - 0.988 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]

There are 1010 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA