Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PKP2

Gene Name Gene ID Reads Annotation
PKP2 ENSGALG00000012913 2547 plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]











Genes with expression patterns similar to PKP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PKP2 ENSGALG00000012913 2547 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
2. DARS ENSGALG00000012355 2887 1.781 - - - - - - - 0.934 0.847 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
3. ACL ACL 1813 1.757 - - - - - - - 0.929 0.828 -
4. SAMHD1 ENSGALG00000001231 5218 1.644 - - - - - - - 0.894 0.750 - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
5. COLEC10 ENSGALG00000033144 3436 1.633 - - - 0.793 - - 0.840 - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
6. RGL1 ENSGALG00000004728 3004 1.628 - - - - - - 0.706 0.922 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
7. DSP ENSGALG00000012790 17884 1.577 - - - 0.776 - - - - 0.801 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
8. SLC45A3 ENSGALG00000000703 85 1.533 - - - - 0.796 - - - - 0.737 solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
9. HAND1 ENSGALG00000035104 2351 1.511 - - - - - - 0.799 - - 0.712 heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
10. PTX3 ENSGALG00000028284 2984 1.488 - - - 0.709 - - 0.779 - - - pentraxin 3 [Source:NCBI gene;Acc:548626]
11. SF3B1 ENSGALG00000008038 30161 1.48 - - - - - - - 0.778 0.702 - splicing factor 3b subunit 1 [Source:HGNC Symbol;Acc:HGNC:10768]
12. SMAD6 ENSGALG00000025898 3144 1.464 - - - 0.738 0.726 - - - - - SMAD family member 6 [Source:NCBI gene;Acc:374096]
13. COG7 ENSGALG00000006156 4072 0.963 - - - - - - - 0.963 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
14. ABL ABL 9532 0.939 - - - - - - - 0.939 - -
15. EFNB2 ENSGALG00000029175 5664 0.939 - - - - - - - 0.939 - - ephrin B2 [Source:NCBI gene;Acc:395625]
16. HCFC2 ENSGALG00000029616 4525 0.937 - - - - - - - 0.937 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
17. PDZD11 ENSGALG00000004198 11484 0.937 - - - - - - - 0.937 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
18. DCAF7 ENSGALG00000000510 8681 0.937 - - - - - - - 0.937 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
19. MFN1 ENSGALG00000041873 4170 0.937 - - - - - - - 0.937 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
20. USP9X ENSGALG00000016236 9419 0.937 - - - - - - - 0.937 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
21. PI4KA ENSGALG00000040756 3973 0.936 - - - - - - - 0.936 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
22. RP2 ENSGALG00000016728 3291 0.936 - - - - - - - 0.936 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
23. C3H6ORF120 C3H6ORF120 2712 0.935 - - - - - - - 0.935 - -
24. SYNE2 ENSGALG00000011811 5542 0.935 - - - - - - - 0.935 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
25. TYSND1 ENSGALG00000033807 716 0.935 - - - - - - - - 0.935 - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
26. TP53INP1 ENSGALG00000041353 6890 0.935 - - - - - - - 0.935 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
27. SDAD1 ENSGALG00000011543 5191 0.935 - - - - - - - 0.935 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
28. PPP3CB ENSGALG00000005243 8794 0.934 - - - - - - - 0.934 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
29. NABP1 ENSGALG00000025884 4195 0.934 - - - - - - - 0.934 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
30. HIC2 ENSGALG00000033416 4051 0.934 - - - - - - - 0.934 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
31. LONP1 ENSGALG00000040492 7133 0.934 - - - - - - - 0.934 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
32. PYURF ENSGALG00000039869 5657 0.934 - - - - - - - 0.934 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
33. SOCS5 ENSGALG00000010016 1134 0.934 - - - - - - - 0.934 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
34. DTD2 ENSGALG00000009978 4322 0.934 - - - - - - - 0.934 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
35. RFWD3 2315 0.934 - - - - - - - 0.934 - - ring finger and WD repeat domain 3
36. CDC123 ENSGALG00000014038 1418 0.933 - - - - - - - 0.933 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
37. LYPLA2 ENSGALG00000004002 3939 0.933 - - - - - - - 0.933 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
38. TTC39A ENSGALG00000010540 1025 0.933 - - - - - - - 0.933 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
39. PHF12 ENSGALG00000031368 1960 0.933 - - - - - - - 0.933 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
40. DIP2C ENSGALG00000006652 1858 0.933 - - - - - - - 0.933 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
41. TRNT1 ENSGALG00000017368 11932 0.933 - - - - - - - 0.933 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
42. UBQLN1 ENSGALG00000012585 5158 0.932 - - - - - - - 0.932 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
43. RRAGD ENSGALG00000026971 2429 0.932 - - - - - - - 0.932 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
44. NDUFAF2 ENSGALG00000027564 7302 0.932 - - - - - - - 0.932 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
45. ACTR10 ENSGALG00000012041 2752 0.932 - - - - - - - 0.932 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
46. DACH1 ENSGALG00000037015 5648 0.932 - - - - - - - 0.932 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
47. DERL3 ENSGALG00000005994 1499 0.931 - - - - - - - 0.931 - - derlin 3 [Source:NCBI gene;Acc:416934]
48. WDR47 ENSGALG00000002129 2624 0.931 - - - - - - - 0.931 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
49. CUTC ENSGALG00000037283 2530 0.93 - - - - - - - 0.930 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
50. TOLLIP ENSGALG00000006697 917 0.93 - - - - - - - 0.930 - - toll interacting protein [Source:NCBI gene;Acc:423099]
51. NUDCD1 ENSGALG00000040879 2965 0.929 - - - - - - - 0.929 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
52. TMEFF1 ENSGALG00000013212 4222 0.929 - - - - - - - 0.929 - - transmembrane protein with EGF-like and two follistatin-like domains 1
53. GALNT1 ENSGALG00000013135 13583 0.929 - - - - - - - 0.929 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
54. ENSGALG00000004643 ENSGALG00000004643 2297 0.929 - - - - - - - 0.929 - -
55. RGMA ENSGALG00000039173 12874 0.928 - - - - - - - 0.928 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
56. ST5 6869 0.928 - - - - - - - 0.928 - - suppression of tumorigenicity 5, transcript variant X1
57. C10orf76 C10orf76 2424 0.928 - - - - - - - 0.928 - -
58. OLFM1 ENSGALG00000002515 1841 0.928 - - - - - - - 0.928 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
59. FAM114A1 ENSGALG00000013583 736 0.928 - - - - - - - 0.928 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
60. SLC43A3 ENSGALG00000020479 1332 0.928 - - - - - - - 0.928 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
61. USP3 ENSGALG00000003427 1236 0.928 - - - - - - - 0.928 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
62. PIGB ENSGALG00000037734 2193 0.928 - - - - - - - - 0.928 - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
63. COMMD7 ENSGALG00000006630 11491 0.927 - - - - - - - 0.927 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
64. SNAI1 ENSGALG00000008018 3930 0.927 - - - - - - - 0.927 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
65. TMEM177 ENSGALG00000011593 311 0.925 - - - - - - - - 0.925 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
66. DHFR ENSGALG00000026757 18478 0.925 - - - - - - - 0.925 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
67. ZNF639 ENSGALG00000005944 6387 0.924 - - - - - - - 0.924 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
68. ZC3H6 ENSGALG00000008269 10353 0.922 - - - - - - - 0.922 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
69. NUPL1 NUPL1 8197 0.922 - - - - - - - 0.922 - -
70. HAPLN1 ENSGALG00000015627 14942 0.921 - - - - - - - 0.921 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
71. PITX3 ENSGALG00000005613 1518 0.919 - - - - - - - 0.919 - - paired like homeodomain 3
72. DYRK2 ENSGALG00000009901 3141 0.918 - - - - - - - 0.918 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
73. ARHGEF4 ENSGALG00000002193 558 0.911 - - - - - - - - 0.911 - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
74. MICU3 ENSGALG00000013661 1466 0.908 - - - - - - - 0.908 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
75. PJA2 ENSGALG00000000264 1574 0.908 - - - - - - - - 0.908 - praja ring finger ubiquitin ligase 2, transcript variant X1
76. MRPL35 ENSGALG00000022950 26070 0.905 - - - - - - - 0.905 - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
77. GPSM1 ENSGALG00000001797 943 0.903 - - - - - - - - 0.903 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
78. DIAPH1 DIAPH1 357 0.903 - - - - - - - - 0.903 -
79. VTI1A ENSGALG00000008880 279 0.9 - - - - - - - - 0.900 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
80. TFIP11 ENSGALG00000005623 7784 0.899 - - - - - - - 0.899 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
81. FAM129A ENSGALG00000004812 269 0.898 - - - - - - - - 0.898 - family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
82. GPS1 ENSGALG00000002827 8433 0.897 - - - - - - - 0.897 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
83. APAF1 ENSGALG00000011531 3102 0.893 - - - - - - - 0.893 - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
84. GSTA GSTA 3130 0.893 - - - - - - - - 0.893 -
85. VPS33A ENSGALG00000004440 2030 0.891 - - - - - - - - 0.891 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
86. KIF20B 554 0.89 - - - - - - - - 0.890 - kinesin family member 20B, transcript variant X8
87. CGN ENSGALG00000000920 407 0.887 - - - - - - - - 0.887 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
88. TMEM120B ENSGALG00000004254 2819 0.886 - - - - - - - 0.886 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
89. HEBP1 ENSGALG00000011798, ENSGALG00000011799 2359 0.886 - - - - - - - - 0.886 - heme binding protein 1 [Source:NCBI gene;Acc:417961]
90. PTPLB PTPLB 13107 0.885 - - - - - - - 0.885 - -
91. MAL2 ENSGALG00000040768 75 0.884 - - - - 0.884 - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
92. PPP2R5C ENSGALG00000029996 5759 0.883 - - - - - - - 0.883 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
93. LEMD3 ENSGALG00000009873 347 0.883 - - - - - - - - 0.883 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
94. SLC24A2 ENSGALG00000015080 54 0.881 - - - - 0.881 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
95. ASNS ENSGALG00000009748 11822 0.88 - - - - - - - - 0.880 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
96. SLC7A6OS ENSGALG00000035575 2878 0.877 - - - - - - - - 0.877 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
97. RPF1 ENSGALG00000008796 9809 0.876 - - - - - - - 0.876 - - ribosome production factor 1 homolog
98. CIAPIN1 ENSGALG00000029268 23036 0.871 - - - - - - - 0.871 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
99. STOX1 330 0.871 - - - - - - - - 0.871 - storkhead box 1, transcript variant X3
100. GPATCH1 ENSGALG00000004839 6455 0.871 - - - - - - - 0.871 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]

There are 378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA