Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDS5A

Gene Name Gene ID Reads Annotation
PDS5A ENSGALG00000014286 13077 PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]











Genes with expression patterns similar to PDS5A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PDS5A ENSGALG00000014286 13077 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
2. ATXN2 ENSGALG00000004625 6306 1.618 - - - - - - 0.836 - - 0.782 ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
3. RALGAPB ENSGALG00000001420 5112 1.571 - - - - - - 0.791 - - 0.780 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
4. HELLS ENSGALG00000005451 7094 1.527 - - - - - - 0.769 - - 0.758 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
5. RSRC2 ENSGALG00000004493 9008 1.518 - - 0.725 - - - 0.793 - - - arginine and serine rich coiled-coil 2 [Source:NCBI gene;Acc:416864]
6. CETN1 ENSGALG00000026741 7243 1.516 - - - - - - 0.744 - - 0.772 centrin 1 [Source:NCBI gene;Acc:422668]
7. COPS2 ENSGALG00000000404 8980 1.508 - - - - - - 0.717 - - 0.791 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
8. HNRNPD ENSGALG00000011184 10686 1.497 - - 0.750 - - - - - - 0.747 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
9. SUV39H2 ENSGALG00000013920 4360 1.489 - - - - - - 0.734 - - 0.755 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
10. UFD1L 12964 1.479 - - - - - - 0.721 - - 0.758 ubiquitin fusion degradation 1 like (yeast)
11. KIDINS220 ENSGALG00000016409 854 1.472 - - 0.724 - - - - - - 0.748 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
12. CPSF2 ENSGALG00000010783 5236 1.464 - - - - - - 0.763 - - 0.701 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
13. RAD21 ENSGALG00000029523 25658 1.46 - - - - - - 0.736 - - 0.724 RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
14. MORF4L1 ENSGALG00000008146 29940 1.443 - - 0.700 - - - 0.743 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
15. SQLE ENSGALG00000036915 4172 1.439 - - - - - - 0.729 - - 0.710 squalene epoxidase [Source:NCBI gene;Acc:420335]
16. CCNE2 ENSGALG00000040794 1229 1.435 - - - - - - 0.709 - - 0.726 cyclin E2 [Source:NCBI gene;Acc:420231]
17. HSPA12A ENSGALG00000009248 7783 1.43 - - - - - 0.726 - - - 0.704 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
18. ENSGALG00000014375 ENSGALG00000014375 4741 0.922 - - - - - - 0.922 - - -
19. PSMA2 ENSGALG00000039387 23620 0.901 - - - - - - 0.901 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
20. ZC3H6 ENSGALG00000008269 10353 0.9 - - - - - - 0.900 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
21. UBR4 ENSGALG00000030563 5225 0.9 - - - - - - 0.900 - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
22. MAD2L1 ENSGALG00000011967 16125 0.896 - - - - - - 0.896 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
23. GBAS 18453 0.895 - - - - - - 0.895 - - - glioblastoma amplified sequence
24. YME1L1 ENSGALG00000007492 8652 0.881 - - - - - - 0.881 - - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
25. PSAP ENSGALG00000004769 14759 0.88 - - - - - - 0.880 - - - prosaposin [Source:NCBI gene;Acc:395602]
26. FEN1 ENSGALG00000033781 16551 0.875 - - - - - - 0.875 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
27. STX12 ENSGALG00000000723 9703 0.866 - - - - - - 0.866 - - - syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430]
28. EIF3L ENSGALG00000012296 42627 0.859 - - - - - - 0.859 - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
29. HNRNPLL ENSGALG00000008504 14719 0.856 - - - - - - 0.856 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
30. NUDT1 ENSGALG00000004245 9034 0.856 - - - - - - 0.856 - - - nudix hydrolase 1 [Source:NCBI gene;Acc:416467]
31. TXLNA 6802 0.854 - - - - - - 0.854 - - - taxilin alpha, transcript variant X2
32. TSPAN6 ENSGALG00000006808 20063 0.853 - - - - - - 0.853 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
33. PPM1D ENSGALG00000035610 6530 0.852 - - - - - - 0.852 - - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
34. EPCAM ENSGALG00000008969 10014 0.852 - - 0.852 - - - - - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
35. LIN28B ENSGALG00000026761 13314 0.848 - - - - - - 0.848 - - - lin-28 homolog B [Source:NCBI gene;Acc:421786]
36. TSSC4 ENSGALG00000006530 10413 0.837 - - - - - - 0.837 - - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
37. REXO2 ENSGALG00000035980 16319 0.836 - - - - - - 0.836 - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
38. DR1 ENSGALG00000005858 8016 0.836 - - - - - - 0.836 - - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
39. PTPLB PTPLB 13107 0.836 - - - - - - 0.836 - - -
40. MARK3 ENSGALG00000011505 14846 0.832 - - - - - - 0.832 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
41. MELK ENSGALG00000016438 9237 0.828 - - - - - - 0.828 - - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
42. CDH1 ENSGALG00000000608 6156 0.82 - - 0.820 - - - - - - - cadherin 3 [Source:NCBI gene;Acc:414845]
43. AGPAT3 ENSGALG00000031932 6903 0.819 - - - - - - - 0.819 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
44. DNAJB11 ENSGALG00000006564 9353 0.816 - - - - - - 0.816 - - - DnaJ heat shock protein family (Hsp40) member B11
45. RABL5 RABL5 5264 0.816 - - - - - - 0.816 - - -
46. GTF2H5 ENSGALG00000013733 12293 0.815 - - - - - - 0.815 - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
47. GMNN ENSGALG00000013626 15838 0.812 - - - - - - 0.812 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
48. PRPF38A ENSGALG00000010627 2476 0.812 - - - - - - - 0.812 - - pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]
49. KDM4A ENSGALG00000010074 7219 0.811 - - - - - - 0.811 - - - lysine demethylase 4A
50. KIF3A ENSGALG00000006860 6209 0.811 - - - - - - 0.811 - - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
51. gga-mir-1778 ENSGALG00000025181 8765 0.808 - - 0.808 - - - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
52. SCAMP5 ENSGALG00000014116 8877 0.808 - - - - - - 0.808 - - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
53. PNRC2 ENSGALG00000004122 19228 0.805 - - - - - - 0.805 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
54. DPCD ENSGALG00000007731 7225 0.803 - - - - - - 0.803 - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
55. BTG1L ENSGALG00000004676 2293 0.803 - - - - - - - - - 0.803 protein BTG1-like
56. VPS29 ENSGALG00000004529 22509 0.801 - - - - - - 0.801 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
57. SNX12 ENSGALG00000005659 9503 0.8 - - - - - - - - - 0.800 sorting nexin 12 [Source:NCBI gene;Acc:428704]
58. LY6E ENSGALG00000041621 16227 0.799 - - - - - - - - - 0.799 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
59. SURF6 ENSGALG00000038413 11178 0.798 - - - - - - 0.798 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
60. NDNF ENSGALG00000011962 2261 0.797 - - 0.797 - - - - - - - neuron-derived neurotrophic factor, transcript variant X4
61. GYG1 ENSGALG00000035535 6311 0.796 - - - - - - 0.796 - - - glycogenin 1 [Source:NCBI gene;Acc:425050]
62. GRAMD4 ENSGALG00000034274 3826 0.796 - - - - - - 0.796 - - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
63. NECAP1 ENSGALG00000037656 5181 0.796 - - - - - - 0.796 - - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
64. EIF3I ENSGALG00000003337 28832 0.794 - - - - - - 0.794 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
65. EMP2 ENSGALG00000027058 3925 0.793 - - 0.793 - - - - - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
66. DTYMK ENSGALG00000006305 11736 0.791 - - - - - - 0.791 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
67. SLC30A4 ENSGALG00000005703 5696 0.79 - - - - - - 0.790 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
68. ENSGALG00000011942 ENSGALG00000011942 175 0.789 - - 0.789 - - - - - - -
69. CISD2 ENSGALG00000027860 12968 0.789 - - - - - - 0.789 - - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
70. MPHOSPH8 ENSGALG00000017145 6280 0.788 - - - - - - 0.788 - - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
71. LONP1 ENSGALG00000040492 7133 0.787 - - - - - - 0.787 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
72. CANX ENSGALG00000032148 11297 0.787 - - - - - - 0.787 - - - calnexin [Source:NCBI gene;Acc:416288]
73. EDF1 ENSGALG00000038003 6757 0.787 - - - - - - 0.787 - - - endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]
74. CCNK ENSGALG00000011138 6416 0.787 - - - - - - 0.787 - - - cyclin K [Source:NCBI gene;Acc:423446]
75. Sep-02_1 Sep-02_1 19203 0.786 - - - - - - - - - 0.786
76. KDM5B ENSGALG00000038948 50645 0.785 - - - - - - 0.785 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
77. HAUS1 ENSGALG00000040397 6195 0.784 - - - - - - 0.784 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
78. G3BP1 ENSGALG00000004160 36795 0.784 - - - - - - 0.784 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
79. CDC73 ENSGALG00000002469 4586 0.784 - - - - - - 0.784 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
80. SEC22B ENSGALG00000039704 16080 0.783 - - - - - - 0.783 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
81. PHACTR4 ENSGALG00000042485 3523 0.782 - - - - - - 0.782 - - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
82. POLR2K ENSGALG00000036019 8962 0.782 - - - - - - 0.782 - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
83. ZMYND11 ENSGALG00000006599 5740 0.782 - - 0.782 - - - - - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
84. KIAA2026 ENSGALG00000015050 4659 0.781 - - - - - - 0.781 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
85. CHCHD3 ENSGALG00000006489 18592 0.78 - - - - - - 0.780 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
86. SLC25A3 ENSGALG00000011514 62606 0.779 - - - - - - 0.779 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
87. C19orf70 ENSGALG00000026847 19315 0.779 - - - - - - 0.779 - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
88. SRSF6 ENSGALG00000000990 12424 0.779 - - - - - - 0.779 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
89. SET ENSGALG00000004701 103296 0.778 - - - - - - - - - 0.778 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
90. MAP3K8 ENSGALG00000007356 188 0.778 - - 0.778 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
91. ABRACL ENSGALG00000013826 19445 0.777 - - - - - - - - - 0.777 ABRA C-terminal like [Source:NCBI gene;Acc:770205]
92. PMPCB ENSGALG00000008280 6357 0.776 - - - - - - 0.776 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
93. PARL ENSGALG00000002315 15943 0.776 - - - - - - 0.776 - - - presenilin associated rhomboid like
94. PDIA6 ENSGALG00000016447 51308 0.776 - - - - - - 0.776 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
95. C1H11ORF70 ENSGALG00000017189 395 0.775 - - 0.775 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
96. WDR75 ENSGALG00000045237 9484 0.775 - - - - - - 0.775 - - - WD repeat domain 75
97. C10orf88 ENSGALG00000000011 6026 0.774 - - - - - - 0.774 - - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
98. LYAR ENSGALG00000015000 10756 0.773 - - - - - - 0.773 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
99. CACHD1 ENSGALG00000011024 2036 0.772 - - 0.772 - - - - - - - cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]
100. FECH ENSGALG00000038461 3491 0.772 - - - - - - - - - 0.772 ferrochelatase [Source:NCBI gene;Acc:374020]

There are 391 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA