Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCDHGC3

Gene Name Gene ID Reads Annotation
PCDHGC3 ENSGALG00000028565 18583 Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]











Genes with expression patterns similar to PCDHGC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PCDHGC3 ENSGALG00000028565 18583 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
2. CAPN15 ENSGALG00000002018 3353 1.559 - - - - - - - 0.785 - 0.774 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
3. MORN4 ENSGALG00000006149 7772 1.525 - - - - 0.786 - - - - 0.739 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
4. SRSF5 ENSGALG00000009421 8502 1.473 - - - - - - 0.755 0.718 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
5. PTCHD1 ENSGALG00000016358 3882 1.456 - - - - - - - 0.755 - 0.701 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
6. CKI CKI 2845 1.45 - - - - - - - 0.733 - 0.717
7. MRPL37 ENSGALG00000010761 10596 0.984 - - - - 0.984 - - - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
8. NUDT21 ENSGALG00000003084 45854 0.929 - - - - 0.929 - - - - - nudix hydrolase 21 [Source:NCBI gene;Acc:100858636]
9. TUBB2C TUBB2C 44249 0.923 - - - - 0.923 - - - - -
10. BUB3 ENSGALG00000009681 36055 0.873 - - - - 0.873 - - - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
11. PEBP1 ENSGALG00000007403 77502 0.846 - - - - 0.846 - - - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
12. TMED10 ENSGALG00000010318 9317 0.833 - - - - - - - - - 0.833 transmembrane p24 trafficking protein 10 [Source:NCBI gene;Acc:423362]
13. COL5A1 ENSGALG00000002546 9942 0.833 - - - - - - 0.833 - - - collagen type V alpha 1 chain [Source:NCBI gene;Acc:395568]
14. TRIP4 ENSGALG00000030672 1255 0.828 - - - - - - - - - 0.828 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
15. CACNA2D2 ENSGALG00000038242 2078 0.826 - - - - - - - - - 0.826 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
16. PKDCCB ENSGALG00000011166 74 0.825 - - - - - - - - - 0.825 protein kinase domain containing, cytoplasmic b
17. PUM1 ENSGALG00000042598 9392 0.822 - - - - - - 0.822 - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
18. SNX5 ENSGALG00000008691 2108 0.822 - - - - - - - 0.822 - - sorting nexin 5 [Source:NCBI gene;Acc:416718]
19. LPCAT2 ENSGALG00000003574 893 0.821 - - - - - - - 0.821 - - lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
20. TYSND1 ENSGALG00000033807 716 0.818 - - - - - - - - - 0.818 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
21. SUV39H2 ENSGALG00000013920 4360 0.817 - - - - - - 0.817 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
22. PLXNA4 ENSGALG00000006473 125 0.815 - - - - - - - - - 0.815 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
23. PROCR ENSGALG00000006547 645 0.813 - - - - - - - - - 0.813 protein C receptor [Source:NCBI gene;Acc:424867]
24. BZFP1 ENSGALG00000027546 632 0.813 - - - - - - - - - 0.813 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
25. HTRA3 ENSGALG00000034673 512 0.811 - - - - 0.811 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
26. CWC15 ENSGALG00000017207 30922 0.81 - - - - 0.810 - - - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
27. ENSGALG00000008594 ENSGALG00000008594 54 0.81 - - - - - - - - - 0.810
28. ENSGALG00000004772 ENSGALG00000004772 173 0.81 - - - - - - - - - 0.810
29. ARHGAP19 ENSGALG00000007609 3655 0.809 - - - - - - - - - 0.809 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
30. NDST2 ENSGALG00000005107 4224 0.809 - - - - 0.809 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
31. ZFPM2 ENSGALG00000040079 942 0.809 - - - - - - - - - 0.809 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
32. MAP3K3 ENSGALG00000000525 115 0.808 - - - - - - - - - 0.808 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
33. MAP1B ENSGALG00000014999 6288 0.808 - - - - 0.808 - - - - - microtubule associated protein 1B
34. PPAPDC1B PPAPDC1B 6698 0.808 - - - - 0.808 - - - - -
35. TM6SF2 ENSGALG00000029015 109 0.808 - - - - - - - - - 0.808 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
36. COL12A1 ENSGALG00000015908 1300 0.808 - - - - - - - - - 0.808 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
37. gga-mir-6584 ENSGALG00000028834 1481 0.808 - - - - 0.808 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
38. SEC61A2 ENSGALG00000036300 4235 0.807 - - - - 0.807 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
39. OPTC ENSGALG00000003554 3698 0.807 - - - - 0.807 - - - - - opticin [Source:NCBI gene;Acc:395130]
40. TMEM39B ENSGALG00000003287 4125 0.807 - - - - 0.807 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
41. ABCC1 ENSGALG00000006646 2596 0.806 - - - - 0.806 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
42. MYEOV2 MYEOV2 5155 0.806 - - - - 0.806 - - - - -
43. SLC38A1 ENSGALG00000009698 566 0.806 - - - - - - - - - 0.806 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
44. IFNAR2 ENSGALG00000041867 1596 0.806 - - - - - - - - - 0.806 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
45. WHSC1L1 4065 0.806 - - - - 0.806 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
46. SOS2 ENSGALG00000012273 41 0.806 - - - - - - - - - 0.806 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
47. RNF113A ENSGALG00000000538 3985 0.806 - - - - 0.806 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
48. MRPL22 ENSGALG00000003919 2760 0.806 - - - - 0.806 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
49. GRPEL2 ENSGALG00000002673 105 0.805 - - - - - - - - - 0.805 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
50. HYOU1 ENSGALG00000007659 3555 0.805 - - - - 0.805 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
51. TBC1D7 ENSGALG00000012731 4891 0.804 - - - - 0.804 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
52. PHKA1 ENSGALG00000004801 2510 0.804 - - - - 0.804 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
53. MAP3K8 ENSGALG00000007356 188 0.804 - - - - - - - - - 0.804 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
54. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.804 - - - - - - - - - 0.804 family with sequence similarity 83, member D
55. MRPL46 ENSGALG00000006782 5033 0.804 - - - - 0.804 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
56. MED1 ENSGALG00000001708 9556 0.804 - - - - 0.804 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
57. TFG ENSGALG00000015299 849 0.804 - - - - - - - - - 0.804 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
58. RGP1 ENSGALG00000002394 5937 0.804 - - - - - - - - - 0.804 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
59. TNPO3 ENSGALG00000039420 5178 0.804 - - - - 0.804 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
60. IBA57 ENSGALG00000005328 4362 0.803 - - - - 0.803 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
61. NOL6 ENSGALG00000030730 7191 0.803 - - - - 0.803 - - - - - nucleolar protein 6
62. UBE3C ENSGALG00000006461 57 0.803 - - - - - - - - - 0.803 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
63. CNKSR3 ENSGALG00000027159 41 0.803 - - - - - - - - - 0.803 CNKSR family member 3, transcript variant X2
64. BCL9 ENSGALG00000037655 4620 0.803 - - - - 0.803 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
65. HEATR5A 1233 0.802 - - - - - - - - - 0.802 HEAT repeat containing 5A, transcript variant X7
66. FN3K ENSGALG00000001531 208 0.802 - - - - - - - - - 0.802 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
67. RAE1 ENSGALG00000007653 8930 0.802 - - - - 0.802 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
68. ATP2B2 ENSGALG00000030908 584 0.802 - - - - - - - - - 0.802 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
69. VAV2 ENSGALG00000002699 503 0.802 - - - - - - - - - 0.802 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
70. ADAMTS12 55 0.802 - - - - - - - - - 0.802 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
71. DTX2 ENSGALG00000001905 1475 0.801 - - - - - - - - - 0.801 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
72. AGPAT3 ENSGALG00000031932 6903 0.8 - - - - 0.800 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
73. RPRD2 ENSGALG00000014656 939 0.8 - - - - - - - - - 0.800 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
74. VOPP1 ENSGALG00000042773 771 0.8 - - - - - - - - - 0.800 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
75. NSG1 ENSGALG00000015010 5829 0.8 - - - - 0.800 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
76. C15H12ORF49 C15H12ORF49 13250 0.8 - - - - 0.800 - - - - -
77. EPB41L1 ENSGALG00000034171 3616 0.8 - - - - 0.800 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
78. SERPINB6 ENSGALG00000012866 1582 0.8 - - - - - - - - - 0.800 serpin family B member 6 [Source:NCBI gene;Acc:420895]
79. URM1 ENSGALG00000004971 17880 0.8 - - - - - - 0.800 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
80. OAF ENSGALG00000006715 12518 0.799 - - - - 0.799 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
81. LUZP1 ENSGALG00000025858 947 0.799 - - - - - - - - - 0.799 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
82. CCDC59 ENSGALG00000028648 9272 0.799 - - - - 0.799 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
83. VPS8 ENSGALG00000006704 5419 0.798 - - - - 0.798 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
84. TTI1 ENSGALG00000006791 1218 0.798 - - - - - - - - - 0.798 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
85. DUSP23 1663 0.798 - - - - - - - - - 0.798 dual specificity phosphatase 23, transcript variant X1
86. SRA1 ENSGALG00000040453 266 0.797 - - - - - - - - - 0.797 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
87. RABL6 ENSGALG00000030263 1127 0.797 - - - - - - - - 0.797 - RAB, member RAS oncogene family like 6 [Source:HGNC Symbol;Acc:HGNC:24703]
88. THBS1 ENSGALG00000009626 3521 0.797 - - - - 0.797 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
89. ZNF142 ENSGALG00000011393 2078 0.797 - - - - - - - - - 0.797 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
90. RAMP2 ENSGALG00000024449 5860 0.797 - - - - - - - 0.797 - - receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
91. AGMO ENSGALG00000010792 76 0.797 - - - - - - - - - 0.797 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
92. PTPRE ENSGALG00000009823 250 0.797 - - - - - - - - - 0.797 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
93. TBRG4 ENSGALG00000038102 9269 0.796 - - - - 0.796 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
94. MITF ENSGALG00000039583 865 0.796 - - - - - - - - - 0.796 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
95. HOXB3 ENSGALG00000043219 5198 0.796 - - - - 0.796 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
96. KCTD9 ENSGALG00000000275 3455 0.796 - - - - 0.796 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
97. NHLRC2 ENSGALG00000008946 387 0.795 - - - - - - - - - 0.795 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
98. RILPL2 ENSGALG00000003321 5632 0.795 - - - - 0.795 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
99. STX6 3297 0.795 - - - - - - - - - 0.795 syntaxin 6
100. USP1 ENSGALG00000010957 8297 0.795 - - - - 0.795 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]

There are 338 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA