Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PARN

Gene Name Gene ID Reads Annotation
PARN ENSGALG00000003091 6363 poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]











Genes with expression patterns similar to PARN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PARN ENSGALG00000003091 6363 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
2. RPE ENSGALG00000002847 7644 1.636 - - - - - - 0.916 0.720 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
3. URM1 ENSGALG00000004971 17880 1.635 - - - - - - 0.837 0.798 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
4. COIL ENSGALG00000003158 7806 1.616 - - - - - - 0.836 0.780 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
5. CAP1 ENSGALG00000036294 18598 1.614 - - - - - - 0.828 0.786 - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
6. TLK1 ENSGALG00000009569 5446 1.6 - - - - - - 0.868 0.732 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
7. HTATSF1 ENSGALG00000006410 3526 1.598 - - - - - - 0.851 0.747 - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
8. HISTH1 ENSGALG00000011747 16825 1.594 - - - - - - 0.859 0.735 - - histone H1
9. FAM207A ENSGALG00000007513 8748 1.585 - - - - - - 0.829 0.756 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
10. CCNK ENSGALG00000011138 6416 1.579 - - - - - - 0.835 0.744 - - cyclin K [Source:NCBI gene;Acc:423446]
11. LEPROT ENSGALG00000011047 7132 1.574 - - - - - - 0.837 0.737 - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
12. RIT1 ENSGALG00000014647 7174 1.546 - - - - - - 0.825 0.721 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
13. GTPBP4 ENSGALG00000006703 16183 1.542 - - - - - - 0.825 0.717 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
14. TRAPPC4 ENSGALG00000007707 3568 1.54 - - - - - - 0.803 0.737 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
15. PSMD10 ENSGALG00000008287 11380 1.534 - - - - - - 0.808 0.726 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
16. PRPF40A ENSGALG00000012526 7724 1.534 - - - - - - 0.816 0.718 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
17. YME1L1 ENSGALG00000007492 8652 1.524 - - - - - - 0.789 0.735 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
18. PEX10 ENSGALG00000001223 5704 1.523 - - - - - - 0.779 0.744 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
19. ADNP2 ENSGALG00000035669 318 1.517 - - - - - 0.755 - - 0.762 - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
20. ENSGALG00000005870 ENSGALG00000005870 4343 1.508 - - - - - - 0.801 0.707 - -
21. EBAG9 ENSGALG00000036293 10058 1.506 - - - - - - 0.716 0.790 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
22. SRSF5 ENSGALG00000009421 8502 1.501 - - - - - - 0.796 0.705 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
23. TMEM135 2283 1.5 - - - - - 0.727 0.773 - - - transmembrane protein 135, transcript variant X4
24. PHPT1 ENSGALG00000039061 17343 1.495 - - - - - - 0.775 0.720 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
25. QTRTD1 QTRTD1 10765 1.484 - - - - - - 0.759 0.725 - -
26. SDF2L1 ENSGALG00000031982 6084 1.483 - - - - - - 0.760 0.723 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
27. HELLS ENSGALG00000005451 7094 1.473 - - - - - - 0.763 0.710 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
28. DCTD ENSGALG00000010674 8396 1.472 - - - - - - 0.723 0.749 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
29. C19H17ORF85 C19H17ORF85 2538 1.47 - - - - - 0.728 - 0.742 - -
30. GAS2 ENSGALG00000003655 2672 1.469 - - - - - - 0.724 0.745 - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
31. ARL2BP ENSGALG00000034102 2700 1.469 - - - - - - 0.768 0.701 - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
32. GBAS 18453 1.449 - - - - - 0.704 0.745 - - - glioblastoma amplified sequence
33. MOCS2 ENSGALG00000014906 4974 1.442 - - - - - - - 0.740 0.702 - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
34. ZADH2 ENSGALG00000022882 11790 1.434 - - - - - - 0.705 0.729 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
35. NSG1 ENSGALG00000015010 5829 1.434 - - - - - - 0.729 0.705 - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
36. LSM10 ENSGALG00000002127 2519 1.42 - - - - - - 0.713 0.707 - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
37. PIF1 ENSGALG00000009032 2342 1.413 - - - - - - 0.708 0.705 - - PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]
38. C5H15ORF29 C5H15ORF29 3709 0.931 - - - - - - 0.931 - - -
39. SRSF6 ENSGALG00000000990 12424 0.904 - - - - - - 0.904 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
40. TRIP12 ENSGALG00000002929 11713 0.887 - - - - - - 0.887 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
41. LARS ENSGALG00000007494 13966 0.882 - - - - - - - 0.882 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
42. EIF2D ENSGALG00000000856 8348 0.879 - - - - - - 0.879 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
43. ZFR ENSGALG00000003235 8466 0.878 - - - - - - 0.878 - - - zinc finger RNA binding protein, transcript variant X3
44. ANAPC16 ENSGALG00000004410 18001 0.878 - - - - - - - 0.878 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
45. EIF1AY ENSGALG00000016410 6431 0.877 - - - - - - 0.877 - - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
46. PARL ENSGALG00000002315 15943 0.874 - - - - - - 0.874 - - - presenilin associated rhomboid like
47. SEC22B ENSGALG00000039704 16080 0.87 - - - - - - 0.870 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
48. VPS29 ENSGALG00000004529 22509 0.867 - - - - - - 0.867 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
49. SBNO1 ENSGALG00000003392 6731 0.866 - - - - - - 0.866 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
50. SMU1 ENSGALG00000002014 8136 0.866 - - - - - - 0.866 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
51. CDC73 ENSGALG00000002469 4586 0.865 - - - - - - 0.865 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
52. HAUS1 ENSGALG00000040397 6195 0.864 - - - - - - 0.864 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
53. SUV39H2 ENSGALG00000013920 4360 0.864 - - - - - - 0.864 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
54. DTYMK ENSGALG00000006305 11736 0.862 - - - - - - 0.862 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
55. LONP1 ENSGALG00000040492 7133 0.861 - - - - - - 0.861 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
56. MED4 ENSGALG00000016995 3309 0.861 - - - - - - 0.861 - - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
57. LYAR ENSGALG00000015000 10756 0.86 - - - - - - 0.860 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
58. UBE2V2 ENSGALG00000028133 7044 0.86 - - - - - - 0.860 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
59. NT5C3A ENSGALG00000031397 6667 0.859 - - - - - - 0.859 - - - 5'-nucleotidase, cytosolic IIIA [Source:NCBI gene;Acc:395080]
60. SLC30A4 ENSGALG00000005703 5696 0.857 - - - - - - 0.857 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
61. NAA16 ENSGALG00000032808 3366 0.857 - - - - - - 0.857 - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
62. BMI1 ENSGALG00000041267 6618 0.855 - - - - - - 0.855 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
63. TPD52L2 ENSGALG00000004683 13624 0.854 - - - - - - 0.854 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
64. E2F7 ENSGALG00000031340 3430 0.854 - - - - - - 0.854 - - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
65. CPSF2 ENSGALG00000010783 5236 0.853 - - - - - - 0.853 - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
66. DPYSL3 ENSGALG00000007582 7743 0.852 - - - - - - 0.852 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
67. SYS1 ENSGALG00000003929 4487 0.851 - - - - - - 0.851 - - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
68. ZYX ENSGALG00000014688 8686 0.85 - - - - - - 0.850 - - - zyxin [Source:NCBI gene;Acc:418300]
69. UFD1L 12964 0.85 - - - - - - 0.850 - - - ubiquitin fusion degradation 1 like (yeast)
70. MARK3 ENSGALG00000011505 14846 0.849 - - - - - - 0.849 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
71. COQ7 ENSGALG00000006861 5118 0.848 - - - - - - 0.848 - - - coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
72. RRP9 ENSGALG00000043359 9747 0.848 - - - - - - 0.848 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
73. SURF6 ENSGALG00000038413 11178 0.846 - - - - - - 0.846 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
74. ALDH5A1 ENSGALG00000032544 4924 0.844 - - - - - - 0.844 - - - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
75. ATP5A1 ATP5A1 32367 0.843 - - - - - - - 0.843 - -
76. AQP1 ENSGALG00000005209 111 0.842 - - - - - 0.842 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
77. GLRX5 ENSGALG00000011079 28943 0.842 - - - - - - 0.842 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
78. DAD1 ENSGALG00000035626 32604 0.84 - - - - - - - 0.840 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
79. EIF4E2 ENSGALG00000007919 8163 0.84 - - - - - - 0.840 - - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
80. SHROOM2 ENSGALG00000030802 4517 0.84 - - - - - - 0.840 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
81. UBE2E1 ENSGALG00000011286 5483 0.839 - - - - - - 0.839 - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
82. CLDND1 ENSGALG00000039538 5048 0.839 - - - - - - 0.839 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
83. NDUFB4 ENSGALG00000027688 8951 0.839 - - - - - - 0.839 - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
84. MOSPD1 ENSGALG00000006132 8503 0.839 - - - - - - 0.839 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
85. MTDH ENSGALG00000034050 9525 0.839 - - - - - - 0.839 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
86. IPO9 ENSGALG00000000397 9263 0.838 - - - - - - 0.838 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
87. DNPEP ENSGALG00000011318 10623 0.838 - - - - - - 0.838 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
88. AES ENSGALG00000029503 17676 0.838 - - - - - - 0.838 - - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
89. LTC4SL ENSGALG00000011450 645 0.837 - - - - - 0.837 - - - - leukotriene C4 synthase-like, transcript variant X3
90. CENPH ENSGALG00000014788 10601 0.837 - - - - - - 0.837 - - - centromere protein H [Source:NCBI gene;Acc:395316]
91. KIAA2026 ENSGALG00000015050 4659 0.836 - - - - - - 0.836 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
92. IREB2 ENSGALG00000035462 10659 0.835 - - - - - - - 0.835 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
93. RNF10 ENSGALG00000036417 8027 0.833 - - - - - - 0.833 - - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
94. NXN 20202 0.833 - - - - - - 0.833 - - - nucleoredoxin, transcript variant X1
95. PDHA1 ENSGALG00000016430 7070 0.833 - - - - - - 0.833 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
96. ABHD17A ENSGALG00000041163 5578 0.833 - - - - - - 0.833 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
97. MRPL10 ENSGALG00000014387 12386 0.832 - - - - - - 0.832 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
98. MPRIP ENSGALG00000004798 6700 0.832 - - - - - - 0.832 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
99. FEN1 ENSGALG00000033781 16551 0.83 - - - - - - 0.830 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
100. SENP6 ENSGALG00000015901 8013 0.829 - - - - - - - 0.829 - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]

There are 667 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA