Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MMP9

Gene Name Gene ID Reads Annotation
MMP9 ENSGALG00000006992 78 matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]











Genes with expression patterns similar to MMP9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMP9 ENSGALG00000006992 78 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
2. CLDN16 ENSGALG00000025821 14 2 - - - - - 1.000 - 1.000 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
3. TMEM114 ENSGALG00000039005 13 1.814 - - - - - 0.921 - 0.893 - - transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
4. ENSGALG00000023638 ENSGALG00000023638 16 1.756 - - - - - 1.000 - 0.756 - -
5. PSMD4 ENSGALG00000028505 16 1.714 - - 0.972 - - - 0.742 - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
6. CLIC3 ENSGALG00000038789 233 1.678 - - 0.866 - - - - 0.812 - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
7. CDK7 ENSGALG00000014790 148 1.546 - - - - - - 0.824 0.722 - - cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]
8. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
9. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
10. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
11. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
12. COL25A1 ENSGALG00000039411 5 1 - - - - - - 1.000 - - - collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
13. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
14. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
15. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
16. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
17. CCDC178 6 1 - - - - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
18. ENSGALG00000027169 ENSGALG00000027169 2 1 - - - - - - 1.000 - - -
19. GAB3 ENSGALG00000008408 19 1 - - - - - - 1.000 - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
20. C1orf168 C1orf168 98 1 - - - - - - 1.000 - - -
21. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
22. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
23. SLC25A22 ENSGALG00000039335 2 1 - - - - - - 1.000 - - - solute carrier family 25 member 22 [Source:NCBI gene;Acc:429678]
24. FK21 ENSGALG00000026348 11 1 - - - - - - - 1.000 - - feather keratin 21 [Source:NCBI gene;Acc:101409259]
25. TPO ENSGALG00000016370 98 1 - - - - - - 1.000 - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
26. DLK1 ENSGALG00000011244 5 1 - - - - - - - 1.000 - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
27. PSEN2 ENSGALG00000009073 7 1 - - - - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
28. YTHDF3 ENSGALG00000039774 170 1 - - - - - - 1.000 - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
29. ST8SIA1 ENSGALG00000013211 14 1 - - - - - - - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
30. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
31. FAM60A FAM60A 109 1 - - - - - - 1.000 - - -
32. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
33. ENSGALG00000006384 ENSGALG00000006384 3 1 - - - - - - 1.000 - - -
34. 5S 5S 0 1 - - - - - 1.000 - - - -
35. NUAK1 ENSGALG00000012662 411 1 - - - - - - 1.000 - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
36. ARHGDIG ENSGALG00000036819 18 1 - - - - - - 1.000 - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
37. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
38. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
39. RS1 ENSGALG00000016523 11 1 - - - - - - - 1.000 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
40. RAB43 ENSGALG00000005021 5 1 - - - - - 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
41. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
42. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
43. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
44. ASPR ASPR 1 1 - - - - - 1.000 - - - -
45. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
46. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - 1.000 - - -
47. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
48. FAT2 ENSGALG00000004320 4 1 - - - - - 1.000 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
49. TNFRSF9 9 1 - - - - - - 1.000 - - - tumor necrosis factor receptor superfamily member 9
50. CHAT ENSGALG00000002289 26 1 - - - - - 1.000 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
51. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
52. CA8 ENSGALG00000039145 109 1 - - - - - - 1.000 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
53. QSOX1 ENSGALG00000003933 184 1 - - - - - 1.000 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
54. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
55. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
56. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
57. TNFRSF8 ENSGALG00000039741 6 1 - - - - - - - 1.000 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
58. STARD10 ENSGALG00000002577 245 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 10
59. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
60. FZD10 ENSGALG00000042003 11 1 - - - - - - 1.000 - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
61. SORCS2 ENSGALG00000015554 7 1 - - - - - - 1.000 - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
62. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
63. FAM208B 24 1 - - - - - - 1.000 - - - family with sequence similarity 208 member B, transcript variant X3
64. CASS4 ENSGALG00000007744 10 1 - - - - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
65. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
66. AJAP1 ENSGALG00000027265 11 1 - - - - - - 1.000 - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
67. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
68. SESN3 ENSGALG00000017204 7 1 - - - - - - 1.000 - - - sestrin 3, transcript variant X2
69. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
70. ENSGALG00000026637 ENSGALG00000026637 12 1 - - - - - - 1.000 - - -
71. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
72. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
73. ZHX1 ENSGALG00000034999 21 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
74. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
75. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
76. TIMP2 ENSGALG00000027070 33 1 - - - - - - 1.000 - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
77. UBAP1 ENSGALG00000021378 11 1 - - - - - - 1.000 - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
78. RCOR1 ENSGALG00000011384 22 1 - - - - - - 1.000 - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
79. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
80. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
81. FABP1 ENSGALG00000015937 12 1 - - - - - - - 1.000 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
82. GLRA4 ENSGALG00000004936 23 1 - - - - - - 1.000 - - - glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
83. ROS1 ENSGALG00000014913 7 1 - - - - - - 1.000 - - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
84. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
85. SNX13 ENSGALG00000010840 13 1 - - - - - - 1.000 - - - sorting nexin 13 [Source:NCBI gene;Acc:420598]
86. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
87. SUFU ENSGALG00000008096 307 1 - - - - - - 1.000 - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
88. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
89. CNDP1 ENSGALG00000013697 7 1 - - - - - - 1.000 - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
90. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
91. TEKT5 ENSGALG00000007257 5 1 - - - - - - - 1.000 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
92. K123 ENSGALG00000041978 16 1 - - - - - - 1.000 - - - K123 protein [Source:NCBI gene;Acc:395873]
93. TNN ENSGALG00000004538 21 1 - - - - - - 1.000 - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
94. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
95. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
96. CCL5 ENSGALG00000043603 10 1 - - - - - - 1.000 - - - chemokine (C-C motif) ligand 5 [Source:NCBI gene;Acc:417465]
97. BCMO1 BCMO1 35 1 - - - - - - 1.000 - - -
98. NOG ENSGALG00000003114 12 1 - - - - - - 1.000 - - - noggin [Source:NCBI gene;Acc:373912]
99. ABI3BP ENSGALG00000015307 4 1 - - - - - - - 1.000 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
100. TMEM207 ENSGALG00000026953 7 1 - - - - - - - 1.000 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]

There are 337 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA