Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for MMACHC

Gene Name Gene ID Reads Annotation
MMACHC ENSGALG00000010234 77 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]











Genes with expression patterns similar to MMACHC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MMACHC ENSGALG00000010234 77 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
2. LCAT ENSGALG00000028928 484 0.913 - - - - - - - - - 0.913 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
3. ATP6V0E1 10 0.908 - - - - - - - - - 0.908 ATPase H+ transporting V0 subunit e1
4. PPM1H ENSGALG00000009805 3 0.908 - - - - - - - - - 0.908 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
5. HOXD11 ENSGALG00000039629 658 0.908 - - - - - - - - - 0.908 homeobox D11 [Source:NCBI gene;Acc:395328]
6. AGO2 ENSGALG00000040957 25 0.908 - - - - - - - - - 0.908 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
7. ENSGALG00000016213 ENSGALG00000016213 33 0.908 - - - - - - - - - 0.908
8. CYP2H1 CYP2H1 363 0.908 - - - - - - - - - 0.908
9. ENSGALG00000026657 ENSGALG00000026657 4 0.908 - - - - - - - - - 0.908
10. SLC12A8 ENSGALG00000012045 39 0.901 - - - - - - - - - 0.901 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
11. WDR72 ENSGALG00000004545 5 0.9 - - - - - - - - - 0.900 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
12. KYNU ENSGALG00000012418 353 0.9 - - - - - - - - - 0.900 kynureninase, transcript variant X3
13. RPUSD2 ENSGALG00000041216 9 0.9 - - - - - - - - - 0.900 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
14. ENSGALG00000012250 ENSGALG00000012250 581 0.898 - - - - - - - - - 0.898
15. DLX3 ENSGALG00000040529 37 0.897 - - - - - - - - - 0.897 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
16. IYD ENSGALG00000012392 315 0.896 - - - - - - - 0.896 - - iodotyrosine deiodinase [Source:HGNC Symbol;Acc:HGNC:21071]
17. UROC1 ENSGALG00000006306 75 0.894 - - - - - - - - - 0.894 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
18. ST6GALNAC3 ENSGALG00000009027 17 0.893 - - - - - - - - - 0.893 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
19. C11H16ORF70 C11H16ORF70 7 0.889 - - - - - - - - - 0.889
20. AGRP ENSGALG00000002244 27 0.886 - - - - - - - - - 0.886 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
21. NEIL3 ENSGALG00000010719 47 0.885 - - - - - - - - - 0.885 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
22. JAKMIP1 ENSGALG00000015528 11 0.885 - - - - - - - - - 0.885 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
23. ADORA2B ENSGALG00000014182 26 0.882 - - - - - - - - - 0.882 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
24. CNST ENSGALG00000010649 18 0.881 - - - - - - - - - 0.881 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
25. WDR41 ENSGALG00000004350 16 0.878 - - - - - - - - - 0.878 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
26. TPP1 52 0.869 - - - - - - - - - 0.869 tripeptidyl peptidase 1
27. HPD ENSGALG00000004343 244 0.867 - - - - - - - - - 0.867 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]
28. TMEM206 ENSGALG00000009822 80 0.866 - - - - - - - - - 0.866 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
29. ACSS1 ENSGALG00000008632 397 0.864 - - - - - - - - - 0.864 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
30. PARVG ENSGALG00000014203 339 0.85 - - - - - 0.850 - - - - parvin gamma [Source:HGNC Symbol;Acc:HGNC:14654]
31. LOC112532477 ENSGALG00000027520 40 0.847 - - - - - - - - - 0.847 fibrinogen-like protein 1-like protein
32. FAM13A ENSGALG00000010371 19 0.845 - - - - - - - - - 0.845 family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
33. PIGM ENSGALG00000010768 41 0.844 - - - - - - - - - 0.844 phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
34. GPC6 ENSGALG00000016900 13 0.841 - - - - - - - - - 0.841 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
35. ENSGALG00000005445 ENSGALG00000005445 16 0.839 - - - - - - - - - 0.839
36. ENSGALG00000016141 ENSGALG00000016141 10 0.839 - - - - - - - - - 0.839
37. UIMC1 ENSGALG00000001158 22 0.837 - - - - - - - - - 0.837 ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
38. RIPK2 ENSGALG00000043535 671 0.837 - - - - - - - - - 0.837 receptor interacting serine/threonine kinase 2 [Source:NCBI gene;Acc:420215]
39. DISP3 ENSGALG00000004662 146 0.834 - - - - - - - - - 0.834 dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
40. TMEM9 ENSGALG00000000226 635 0.832 - - - - - - - - - 0.832 transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
41. ENTPD7 ENSGALG00000023691 46 0.83 - - - - - - - - - 0.830 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
42. HGF/SF HGF/SF 345 0.828 - - - - - - - - - 0.828
43. DZIP1L 45 0.825 - - - - - 0.825 - - - - DAZ interacting zinc finger protein 1 like, transcript variant X1
44. TJP3 ENSGALG00000000748 45 0.823 - - - - - - - - - 0.823 tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
45. CACNB2 ENSGALG00000008591 53 0.818 - - - - - - - - - 0.818 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
46. TNIP2 ENSGALG00000015666 28 0.818 - - - - - - - - - 0.818 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
47. AUH ENSGALG00000021843 349 0.814 - - - - - - - - - 0.814 AU RNA binding methylglutaconyl-CoA hydratase [Source:NCBI gene;Acc:427269]
48. TBC1D8B ENSGALG00000009040 75 0.809 - - - - - - - - - 0.809 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
49. DEF6 ENSGALG00000002615 1038 0.809 - - - - - - - - - 0.809 DEF6, guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:2760]
50. SLC3A1 ENSGALG00000009973 608 0.808 - - - - - - - - - 0.808 solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
51. LRRC8C ENSGALG00000006170 43 0.808 - - - - - - - - - 0.808 leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
52. RNF216 ENSGALG00000004629 84 0.807 - - - - - - - - - 0.807 ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
53. LOC416263 ENSGALG00000004078 3 0.807 - - - - - - - 0.807 - - LON peptidase N-terminal domain and RING finger protein 2-like
54. WNT5B ENSGALG00000012998 35 0.806 - - - - - - - - - 0.806 Wnt family member 5B [Source:NCBI gene;Acc:418154]
55. STARD10 ENSGALG00000002577 245 0.804 - - - - - 0.804 - - - - StAR related lipid transfer domain containing 10
56. VPS45 ENSGALG00000013899 154 0.796 - - - - - - - 0.796 - - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
57. ENSGALG00000018733 ENSGALG00000018733 175 0.794 - - - - - - - - - 0.794
58. SLC6A2 ENSGALG00000003560 108 0.793 - - - - - - - - - 0.793 solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
59. GALNT11 ENSGALG00000006233 210 0.788 - - - - - - - - - 0.788 polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
60. ZFAND3 ENSGALG00000010134 34 0.788 - - - - - - - - - 0.788 zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]
61. ATP13A3 ENSGALG00000007075 202 0.787 - - - - - - - - - 0.787 ATPase 13A3 [Source:HGNC Symbol;Acc:HGNC:24113]
62. TDP1 ENSGALG00000010669 57 0.785 - - - - - - - - - 0.785 tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
63. gga-mir-6665 ENSGALG00000028814 430 0.783 - - - - - - - - - 0.783 gga-mir-6665 [Source:miRBase;Acc:MI0022485]
64. gga-mir-99a ENSGALG00000018242 192 0.777 - - - - - 0.777 - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
65. MFSD9 ENSGALG00000016792 40 0.775 - - - - - - - - - 0.775 major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
66. MAPK1 ENSGALG00000001501 34 0.773 - - - - - - - - - 0.773 mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
67. COL24A1 ENSGALG00000006864 161 0.768 - - - - - - - - - 0.768 collagen type XXIV alpha 1 chain, transcript variant X4
68. USP3 ENSGALG00000003427 1236 0.757 - - - - - 0.757 - - - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
69. ARV1 ENSGALG00000011155 38 0.756 - - - - - - - - - 0.756 ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
70. EIF4ENIF1 ENSGALG00000006898 24 0.755 - - - - - 0.755 - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
71. OGFRL1 ENSGALG00000015951 69 0.751 - - - - - 0.751 - - - - opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]
72. SMG7 ENSGALG00000004667 707 0.748 - - - - - - - - - 0.748 SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
73. FANCF ENSGALG00000003660 25 0.747 - - - - - - - - - 0.747 FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
74. RGS12 ENSGALG00000015626 280 0.746 - - - - - 0.746 - - - - regulator of G protein signaling 12 [Source:HGNC Symbol;Acc:HGNC:9994]
75. MBTD1 ENSGALG00000002954 254 0.745 - - - - - - - - - 0.745 mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
76. AGR2 ENSGALG00000010825 1220 0.744 - - - - - 0.744 - - - - anterior gradient 2, protein disulphide isomerase family member [Source:HGNC Symbol;Acc:HGNC:328]
77. BMF ENSGALG00000014537 64 0.741 - - - - - - - - - 0.741 Bcl2 modifying factor [Source:NCBI gene;Acc:769140]
78. WIF1 ENSGALG00000039209 863 0.74 - - - - - - - - - 0.740 WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
79. LCOR ENSGALG00000028512 30 0.739 - - - - - - - - - 0.739 ligand dependent nuclear receptor corepressor, transcript variant X16
80. PLCL1 ENSGALG00000008113 23 0.739 - - - - - - - - - 0.739 phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
81. PLACL2 ENSGALG00000011190 222 0.736 - - - - - - - - - 0.736 Placenta-specific gene 8-like 2
82. TAL2 ENSGALG00000023114 17 0.735 - - 0.735 - - - - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
83. ARHGAP31 ENSGALG00000015077 19 0.731 - - - - - - - - - 0.731 Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]
84. DGKD ENSGALG00000001730 4456 0.731 - - - - - - - - - 0.731 diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
85. HMBOX1 ENSGALG00000016633 247 0.73 - - - - - 0.730 - - - - homeobox containing 1 [Source:NCBI gene;Acc:422024]
86. PSPH ENSGALG00000002397 892 0.729 - - - - - - - 0.729 - - phosphoserine phosphatase [Source:NCBI gene;Acc:417540]
87. BCL10 ENSGALG00000028935 1240 0.729 - - - - - - - - - 0.729 B-cell CLL/lymphoma 10 [Source:NCBI gene;Acc:424528]
88. TFB1M ENSGALG00000013647 84 0.728 - - - - - - - - - 0.728 transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
89. CACNA1S 63 0.727 - - - - - 0.727 - - - - calcium voltage-gated channel subunit alpha1 S, transcript variant X4
90. GAP43 ENSGALG00000015089 505 0.725 - - - - - - 0.725 - - - growth associated protein 43 [Source:NCBI gene;Acc:427955]
91. FHL2 ENSGALG00000016797 11 0.724 - - - - - - - - - 0.724 four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
92. ZBTB38 ENSGALG00000036543 116 0.723 - - - - - - - 0.723 - - zinc finger and BTB domain containing 38 [Source:HGNC Symbol;Acc:HGNC:26636]
93. ENPEP ENSGALG00000031410 147 0.72 - - - - - - - - - 0.720 glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
94. ALKBH8 ENSGALG00000017170 699 0.717 - - - - - 0.717 - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
95. IL22RA1 ENSGALG00000004221 71 0.717 - - - - - - - - - 0.717 interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
96. C12orf66 ENSGALG00000027682 2110 0.717 - - - - - - - - - 0.717 chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
97. BSPRY ENSGALG00000008861 98 0.716 - - - - - - - 0.716 - - B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
98. FMN1 ENSGALG00000009723 100 0.712 - - - - - 0.712 - - - - formin 1 [Source:NCBI gene;Acc:386747]
99. CHAF1B ENSGALG00000016042 748 0.711 - - - - - - - - - 0.711 chromatin assembly factor 1 subunit B [Source:NCBI gene;Acc:418514]
100. RTEL1 ENSGALG00000006123 1317 0.71 - - - - - 0.710 - - - - regulator of telomere elongation helicase 1, transcript variant X6

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA