Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MID1

Gene Name Gene ID Reads Annotation
MID1 ENSGALG00000038504 1684 midline 1 [Source:NCBI gene;Acc:373920]











Genes with expression patterns similar to MID1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MID1 ENSGALG00000038504 1684 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 midline 1 [Source:NCBI gene;Acc:373920]
2. RAB11FIP2 ENSGALG00000009304 913 1.627 - - - - - - 0.734 - - 0.893 RAB11 family interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29152]
3. AP3B2 2331 1.61 - - - - - - - 0.755 - 0.855 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
4. HOXA3 ENSGALG00000027925 4287 1.553 - - - - - - - 0.700 - 0.853 homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
5. GRPEL2 ENSGALG00000002673 105 0.919 - - - - - - - - - 0.919 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
6. EP3 EP3 741 0.917 - - - - - - - - - 0.917
7. SNN ENSGALG00000028876 1687 0.911 - - - - - - - - - 0.911 stannin [Source:NCBI gene;Acc:416429]
8. CENPJ ENSGALG00000017148 1415 0.908 - - - - - - - - - 0.908 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
9. ENSGALG00000027621 ENSGALG00000027621 863 0.908 - - - - - - - - - 0.908
10. MAP3K3 ENSGALG00000000525 115 0.907 - - - - - - - - - 0.907 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
11. GPR114 GPR114 46 0.906 - - - - - - - - - 0.906
12. RP9 ENSGALG00000035453 1186 0.906 - - - - - - - - - 0.906 retinitis pigmentosa 9 (autosomal dominant)
13. STX6 3297 0.906 - - - - - - - - - 0.906 syntaxin 6
14. ATP2B2 ENSGALG00000030908 584 0.905 - - - - - - - - - 0.905 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
15. TMEM199 ENSGALG00000023757 10781 0.904 - - - - - - - - - 0.904 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
16. RGP1 ENSGALG00000002394 5937 0.904 - - - - - - - - - 0.904 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
17. ADAMTS12 55 0.902 - - - - - - - - - 0.902 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
18. SHPK ENSGALG00000004637 2386 0.901 - - - - - - - - - 0.901 sedoheptulokinase, transcript variant X1
19. ENSGALG00000018358 ENSGALG00000018358 101 0.901 - - - - - - - - - 0.901
20. PROCR ENSGALG00000006547 645 0.9 - - - - - - - - - 0.900 protein C receptor [Source:NCBI gene;Acc:424867]
21. ENSGALG00000004643 ENSGALG00000004643 2297 0.9 - - - - - - - - - 0.900
22. TFG ENSGALG00000015299 849 0.899 - - - - - - - - - 0.899 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
23. CNKSR3 ENSGALG00000027159 41 0.899 - - - - - - - - - 0.899 CNKSR family member 3, transcript variant X2
24. SLC38A1 ENSGALG00000009698 566 0.899 - - - - - - - - - 0.899 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
25. TTI1 ENSGALG00000006791 1218 0.898 - - - - - - - - - 0.898 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
26. TM6SF2 ENSGALG00000029015 109 0.898 - - - - - - - - - 0.898 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
27. AGMO ENSGALG00000010792 76 0.898 - - - - - - - - - 0.898 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
28. PMVK ENSGALG00000046656 645 0.898 - - - - - - - - - 0.898 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
29. ZFPM2 ENSGALG00000040079 942 0.897 - - - - - - - - - 0.897 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
30. MAP3K8 ENSGALG00000007356 188 0.897 - - - - - - - - - 0.897 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
31. SOS2 ENSGALG00000012273 41 0.896 - - - - - - - - - 0.896 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
32. CTK-1 CTK-1 1618 0.896 - - - - - - - - - 0.896
33. RPGR ENSGALG00000036284 186 0.896 - - - - - - - - - 0.896 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
34. UBE3C ENSGALG00000006461 57 0.895 - - - - - - - - - 0.895 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
35. VAV2 ENSGALG00000002699 503 0.895 - - - - - - - - - 0.895 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
36. TYSND1 ENSGALG00000033807 716 0.895 - - - - - - - - - 0.895 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
37. ENSGALG00000008594 ENSGALG00000008594 54 0.895 - - - - - - - - - 0.895
38. BCOR ENSGALG00000016245 85 0.893 - - - - - - - - - 0.893 BCL6 corepressor, transcript variant X8
39. ENSGALG00000004772 ENSGALG00000004772 173 0.893 - - - - - - - - - 0.893
40. TNFRSF21 ENSGALG00000016719 2762 0.893 - - - - - - - - - 0.893 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
41. ZNF142 ENSGALG00000011393 2078 0.892 - - - - - - - - - 0.892 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
42. ELL2 ENSGALG00000014678 1111 0.892 - - - - - - - - - 0.892 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
43. SERPINB6 ENSGALG00000012866 1582 0.891 - - - - - - - - - 0.891 serpin family B member 6 [Source:NCBI gene;Acc:420895]
44. USE1 ENSGALG00000003703 4680 0.891 - - - - - - - - - 0.891 unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
45. NFKBIE ENSGALG00000044525 633 0.891 - - - - - - - - - 0.891 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
46. USP36 ENSGALG00000037018 783 0.891 - - - - - - - - - 0.891 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
47. PTPRE ENSGALG00000009823 250 0.89 - - - - - - - - - 0.890 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
48. ENSGALG00000001919 ENSGALG00000001919 531 0.89 - - - - - - - - - 0.890
49. IFNAR2 ENSGALG00000041867 1596 0.889 - - - - - - - - - 0.889 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
50. TRIP4 ENSGALG00000030672 1255 0.888 - - - - - - - - - 0.888 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
51. RASSF8 ENSGALG00000014041 850 0.888 - - - - - - - - - 0.888 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
52. NBN ENSGALG00000037686 648 0.888 - - - - - - - - - 0.888 nibrin [Source:NCBI gene;Acc:374246]
53. PCMTD2 ENSGALG00000005901 1833 0.887 - - - - - - - - - 0.887 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
54. DTX2 ENSGALG00000001905 1475 0.887 - - - - - - - - - 0.887 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
55. MITF ENSGALG00000039583 865 0.887 - - - - - - - - - 0.887 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
56. SUPV3L1 ENSGALG00000004197 4141 0.885 - - - - - - - - - 0.885 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
57. TGFB3 ENSGALG00000010346 3118 0.885 - - - - - - - - - 0.885 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
58. CKI CKI 2845 0.884 - - - - - - - - - 0.884
59. TRIM3 ENSGALG00000034004 110 0.884 - - - - - - - - - 0.884 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
60. USP14 ENSGALG00000014920 18778 0.884 - - - - - - - - - 0.884 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
61. INTS8 ENSGALG00000037955 3349 0.883 - - - - - - - - - 0.883 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
62. C28H19ORF10 C28H19ORF10 16529 0.883 - - - - - - - - - 0.883
63. DUSP23 1663 0.882 - - - - - - - - - 0.882 dual specificity phosphatase 23, transcript variant X1
64. CCBL2 CCBL2 184 0.882 - - - - - - - - - 0.882
65. PRICKLE1 ENSGALG00000009556 60 0.882 - - - - - - - - - 0.882 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
66. CEP57 ENSGALG00000017201 524 0.882 - - - - - - - - - 0.882 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
67. PDCD7 ENSGALG00000021027 3807 0.881 - - - - - - - - - 0.881 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
68. COL12A1 ENSGALG00000015908 1300 0.881 - - - - - - - - - 0.881 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
69. HPS4 ENSGALG00000005595 2217 0.881 - - - - - - - - - 0.881 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
70. FTSJ3 ENSGALG00000032993 8929 0.88 - - - - - - - - - 0.880 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
71. IMPA2 ENSGALG00000013814 4202 0.88 - - - - - - - - - 0.880 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
72. FOXP1 127 0.88 - - - - - - - - - 0.880 forkhead box P1, transcript variant X14
73. CTCF 10811 0.88 - - - - - - - - - 0.880 CCCTC-binding factor, transcript variant X2
74. EEA1 ENSGALG00000011280 923 0.879 - - - - - - - - - 0.879 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
75. OBFC1 OBFC1 1071 0.878 - - - - - - - - - 0.878
76. TRMT44 ENSGALG00000015594 1490 0.878 - - - - - - - - - 0.878 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
77. C5orf24 ENSGALG00000006371 1573 0.877 - - - - - - - - - 0.877 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
78. HEATR5A 1233 0.876 - - - - - - - - - 0.876 HEAT repeat containing 5A, transcript variant X7
79. DNAJC24 ENSGALG00000012130 1882 0.875 - - - - - - - - - 0.875 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
80. COQ6 ENSGALG00000010197 3283 0.874 - - - - - - - - - 0.874 coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
81. MCFD2 ENSGALG00000010017 8905 0.874 - - - - - - - - - 0.874 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
82. HS6ST1 ENSGALG00000002155 533 0.874 - - - - - - - - - 0.874 heparan sulfate 6-O-sulfotransferase 1 [Source:NCBI gene;Acc:395141]
83. TNFRSF1A ENSGALG00000039461 1569 0.873 - - - - - - - - - 0.873 TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
84. RPRD2 ENSGALG00000014656 939 0.871 - - - - - - - - - 0.871 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
85. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.871 - - - - - - - - - 0.871 family with sequence similarity 83, member D
86. VOPP1 ENSGALG00000042773 771 0.871 - - - - - - - - - 0.871 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
87. RFWD3 2315 0.87 - - - - - - - - - 0.870 ring finger and WD repeat domain 3
88. NHLRC2 ENSGALG00000008946 387 0.868 - - - - - - - - - 0.868 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
89. PLXNA4 ENSGALG00000006473 125 0.868 - - - - - - - - - 0.868 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
90. STAT5 STAT5 1796 0.868 - - - - - - - - - 0.868
91. PRR11 2624 0.864 - - - - - - - - - 0.864 proline rich 11, transcript variant X8
92. PDCD4 ENSGALG00000008700 574 0.863 - - - - - - - - - 0.863 programmed cell death 4 [Source:NCBI gene;Acc:374191]
93. LUZP1 ENSGALG00000025858 947 0.863 - - - - - - - - - 0.863 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
94. ANGEL1 ENSGALG00000010372 1763 0.862 - - - - - - - - - 0.862 angel homolog 1 [Source:NCBI gene;Acc:423370]
95. MRPS5 ENSGALG00000008550 1707 0.862 - - - - - - - - - 0.862 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
96. DLX5 ENSGALG00000009129 1395 0.861 - - - - - - - - - 0.861 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
97. TRIM24 ENSGALG00000012823 2725 0.86 - - - - - - - - - 0.860 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
98. CDC2L1 CDC2L1 894 0.86 - - - - - - - - - 0.860
99. FAM96B 14435 0.86 - - - - - - - - - 0.860 family with sequence similarity 96 member B
100. EDEM2 ENSGALG00000003128 3338 0.859 - - - - - - - - - 0.859 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]

There are 317 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA