Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MATR3

Gene Name Gene ID Reads Annotation
MATR3 ENSGALG00000002478 12793 matrin 3 [Source:NCBI gene;Acc:373948]











Genes with expression patterns similar to MATR3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MATR3 ENSGALG00000002478 12793 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 matrin 3 [Source:NCBI gene;Acc:373948]
2. FAM192A ENSGALG00000021473 10213 1.81 - - - - - - 0.997 - - 0.813 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
3. LRPPRC ENSGALG00000009967 17091 1.706 - - - - - - 0.989 - - 0.717 leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
4. CORO1C ENSGALG00000004901 7055 1.698 - - - - - - 0.996 0.702 - - coronin 1C [Source:NCBI gene;Acc:416893]
5. GNL2 ENSGALG00000001973 10148 1.451 - - 0.719 - - - - 0.732 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
6. HDAC8 ENSGALG00000004825 12066 0.998 - - - - - - 0.998 - - - histone deacetylase 8, transcript variant X2
7. CCNYL1 ENSGALG00000008485 11958 0.998 - - - - - - 0.998 - - - cyclin Y like 1
8. EIF3D ENSGALG00000012529 40887 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
9. USPL1 ENSGALG00000017079 6263 0.997 - - - - - - 0.997 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
10. EIF1B ENSGALG00000038646 9508 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
11. ZEB1 ENSGALG00000007260 9277 0.997 - - - - - - 0.997 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
12. Sep-06 Sep-06 5961 0.997 - - - - - - 0.997 - - -
13. C9orf64 ENSGALG00000012589 6097 0.997 - - - - - - 0.997 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
14. EFTUD2 ENSGALG00000000988 17913 0.997 - - - - - - 0.997 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
15. RAB12 ENSGALG00000033608 14160 0.997 - - - - - - 0.997 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
16. WDHD1 ENSGALG00000012199 3570 0.997 - - - - - - 0.997 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
17. MCM3 ENSGALG00000016676 16934 0.997 - - - - - - 0.997 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
18. FAT1 ENSGALG00000013579 6030 0.997 - - - - - - 0.997 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
19. ARHGAP32 ENSGALG00000043511 7916 0.996 - - - - - - 0.996 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
20. TMEM18 ENSGALG00000028744 11779 0.996 - - - - - - 0.996 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
21. DAPK3 ENSGALG00000037733 6215 0.996 - - - - - - 0.996 - - - death-associated protein kinase 3, transcript variant X2
22. LRPAP1 ENSGALG00000015612 3526 0.996 - - - - - - 0.996 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
23. CXCL12 ENSGALG00000041346 4128 0.996 - - - - - - 0.996 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
24. RNF141 ENSGALG00000029586 4962 0.996 - - - - - - 0.996 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
25. VSX1 ENSGALG00000037576 1517 0.995 - - - - - - 0.995 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
26. GPC1 ENSGALG00000040316 13364 0.995 - - - - - - 0.995 - - - glypican 1 [Source:NCBI gene;Acc:424770]
27. CNOT6 ENSGALG00000034316 10496 0.995 - - - - - - 0.995 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
28. CTBPL ENSGALG00000007642 14238 0.995 - - - - - - 0.995 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
29. SLC9A3R1 ENSGALG00000007650 13053 0.995 - - - - - - 0.995 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
30. C15H12ORF49 C15H12ORF49 13250 0.992 - - - - - - 0.992 - - -
31. MCM6 ENSGALG00000012348 12523 0.992 - - - - - - 0.992 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
32. INTS4 ENSGALG00000000091 5965 0.992 - - - - - - 0.992 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
33. DNAJC7 ENSGALG00000042796 14597 0.992 - - - - - - 0.992 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
34. IFT20 ENSGALG00000005707 23973 0.991 - - - - - - 0.991 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
35. UBE2L3 ENSGALG00000036739 21401 0.99 - - - - - - 0.990 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
36. RAP1B ENSGALG00000009927 26562 0.989 - - - - - - 0.989 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
37. DHFR ENSGALG00000026757 18478 0.988 - - - - - - 0.988 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
38. PPIG ENSGALG00000009839 24114 0.984 - - - - - - 0.984 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
39. ZNF644 ENSGALG00000034253 28348 0.983 - - - - - - 0.983 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
40. PDLIM4 ENSGALG00000039872 7823 0.982 - - - - - - 0.982 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
41. HNRNPH3 ENSGALG00000003947 28724 0.982 - - - - - - 0.982 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
42. CDCA4 ENSGALG00000011692 10381 0.981 - - - - - - 0.981 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
43. SMARCE1 ENSGALG00000003882 49063 0.978 - - - - - - 0.978 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
44. HNRNPM ENSGALG00000000377 40684 0.959 - - - - - - 0.959 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
45. ZNF385B ENSGALG00000009012 290 0.903 - - - - - - - - - 0.903 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
46. PKD2 ENSGALG00000010921 55 0.903 - - - - - - - - - 0.903 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
47. ING5 ENSGALG00000006317 149 0.9 - - - - - - - - - 0.900 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
48. KIF24 ENSGALG00000005806 124 0.898 - - - - - - - - - 0.898 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
49. TM6SF1 ENSGALG00000006027 20 0.895 - - - - - - - - - 0.895 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
50. IRAK2 ENSGALG00000008407 5934 0.894 - - - - - - - 0.894 - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
51. AKAP11 ENSGALG00000022739 82 0.894 - - - - - - - - - 0.894 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
52. TNFAIP3 ENSGALG00000013861 11 0.894 - - - - - - - - - 0.894 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
53. gga-mir-6544 ENSGALG00000027916 19 0.894 - - - - - - - - - 0.894 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
54. TNN ENSGALG00000004538 21 0.893 - - - - - - - - - 0.893 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
55. C3orf58 ENSGALG00000002347 27 0.892 - - - - - - - - - 0.892 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
56. NMBR ENSGALG00000013813 15 0.891 - - - - - - - - - 0.891 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
57. TRAK2 ENSGALG00000008370 46 0.889 - - - - - - - - - 0.889 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
58. BOK ENSGALG00000005772 117 0.889 - - - - - - - - - 0.889 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
59. TMEM184C ENSGALG00000010019 7856 0.888 - - - - - - - 0.888 - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
60. CLIC3 ENSGALG00000038789 233 0.887 - - - - - - - - - 0.887 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
61. SLC7A2 ENSGALG00000013627 58 0.886 - - - - - - - - - 0.886 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
62. CARS ENSGALG00000006427 7660 0.884 - - - - - - - 0.884 - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
63. TMEM200B ENSGALG00000024318 117 0.881 - - - - - - - - - 0.881 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
64. TBX5 ENSGALG00000008253 820 0.881 - - - - - - - - - 0.881 T-box 5 [Source:NCBI gene;Acc:373988]
65. TRMT61A ENSGALG00000011522 14 0.878 - - - - - - - - - 0.878 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
66. SENP7 ENSGALG00000044642 48 0.878 - - - - - - - - - 0.878 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
67. ZMYND10 ENSGALG00000035883 58 0.876 - - - - - - - - - 0.876 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
68. RNF215 ENSGALG00000040925 19 0.875 - - - - - - - - - 0.875 ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
69. TNFAIP2 ENSGALG00000011446 32 0.874 - - - - - - - - - 0.874 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
70. GSS ENSGALG00000003281 57 0.873 - - - - - - - - - 0.873 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
71. SLC20A1 ENSGALG00000013740 40 0.872 - - - - - - - - - 0.872 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
72. SMEK1 SMEK1 95 0.871 - - - - - - - - - 0.871
73. KCNB1 ENSGALG00000004758 620 0.871 - - - - - - - - - 0.871 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
74. KAT6B ENSGALG00000005035 301 0.869 - - - - - - - - - 0.869 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
75. NAALADL2 ENSGALG00000023670 39 0.866 - - - - - - - - - 0.866 N-acetylated alpha-linked acidic dipeptidase like 2 [Source:HGNC Symbol;Acc:HGNC:23219]
76. MYH11 ENSGALG00000006520 166 0.865 - - - - - - - - - 0.865 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
77. OSBPL2 ENSGALG00000005195 94 0.861 - - - - - - - - - 0.861 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
78. CREB5 ENSGALG00000038265 92 0.861 - - - - - - - - - 0.861 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
79. INADL INADL 51 0.86 - - - - - - - - - 0.860
80. MB ENSGALG00000012541 260 0.859 - - - - - - - - - 0.859 myoglobin [Source:NCBI gene;Acc:418056]
81. BMP2K ENSGALG00000010885 37 0.859 - - - - - - - - - 0.859 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
82. SERAC1 ENSGALG00000013732 24 0.858 - - - - - - - - - 0.858 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
83. LMBR1 ENSGALG00000030379 29 0.858 - - - - - - - - - 0.858 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
84. NME6 ENSGALG00000038044 1231 0.858 - - - - - - - - - 0.858 NME/NM23 nucleoside diphosphate kinase 6
85. PXK ENSGALG00000007052 121 0.857 - - - - - - - - - 0.857 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
86. ROGDI ENSGALG00000001841 313 0.857 - - - - - - - - - 0.857 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
87. PDE3A ENSGALG00000013143 28 0.856 - - - - - - - - - 0.856 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
88. PHF11 ENSGALG00000019094 770 0.855 - - - - - - - - - 0.855 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
89. TPGS1 ENSGALG00000026780 688 0.855 - - - - - - - - - 0.855 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
90. BLOC1S2 ENSGALG00000005794 544 0.855 - - - - - - - - - 0.855 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
91. SRR ENSGALG00000003155 93 0.852 - - - - - - - - - 0.852 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
92. JMJD1C ENSGALG00000002942 4556 0.852 - - - - - - - - - 0.852 jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
93. TRAF-5 TRAF-5 102 0.852 - - - - - - - - - 0.852
94. SMOC2 ENSGALG00000011205 340 0.851 - - - - - - - - - 0.851 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
95. ZEB2 ENSGALG00000040465 315 0.85 - - - - - - - - - 0.850 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
96. SLC30A9 ENSGALG00000031415 36 0.849 - - - - - - - - - 0.849 solute carrier family 30 member 9
97. FAM154B FAM154B 175 0.849 - - - - - - - - - 0.849
98. ERRFI1 ENSGALG00000000535 83 0.848 - - - - - - - - - 0.848 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
99. CEP85 ENSGALG00000042624 59 0.848 - - - - - - - - - 0.848 centrosomal protein 85 [Source:HGNC Symbol;Acc:HGNC:25309]
100. RNF170 ENSGALG00000015386 296 0.847 - - - - - - - - - 0.847 ring finger protein 170 [Source:NCBI gene;Acc:427296]

There are 201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA