Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSM7

Gene Name Gene ID Reads Annotation
LSM7 ENSGALG00000000408 19112 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]











Genes with expression patterns similar to LSM7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSM7 ENSGALG00000000408 19112 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
2. THOC5 ENSGALG00000029223 16069 1.852 - - - - - - 0.992 0.860 - - THO complex 5 [Source:NCBI gene;Acc:417019]
3. RNF7 ENSGALG00000021117 13110 1.75 - - - - - - 0.940 0.810 - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
4. DDOST ENSGALG00000010073 18707 0.995 - - - - - - 0.995 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
5. YWHAE ENSGALG00000002661 37143 0.993 - - - - - - 0.993 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
6. C1D ENSGALG00000008765 14779 0.993 - - - - - - 0.993 - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
7. RALBP1 ENSGALG00000008405 13780 0.992 - - - - - - 0.992 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
8. UTP15 ENSGALG00000013510 13122 0.992 - - - - - - 0.992 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
9. DDX1 ENSGALG00000016461 15157 0.992 - - - - - - 0.992 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
10. PLOD2 ENSGALG00000006783 22789 0.992 - - - - - - 0.992 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
11. RBM18 ENSGALG00000028167 10372 0.991 - - - - - - 0.991 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
12. C28H19ORF10 C28H19ORF10 16529 0.991 - - - - - - 0.991 - - -
13. IRF6 ENSGALG00000001405 3144 0.991 - - - - - - 0.991 - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
14. DEPDC1B ENSGALG00000014729 5334 0.99 - - - - - - 0.990 - - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
15. CHKA ENSGALG00000036754 5077 0.99 - - - - - - 0.990 - - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
16. HSD17B12 ENSGALG00000036787 11748 0.99 - - - - - - 0.990 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
17. CKAP2 ENSGALG00000017025 25020 0.989 - - - - - - 0.989 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
18. RBM45 ENSGALG00000009202 6057 0.989 - - - - - - 0.989 - - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
19. SLBP ENSGALG00000015712 5586 0.988 - - - - - - 0.988 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
20. APP ENSGALG00000015770 9438 0.987 - - - - - - 0.987 - - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
21. TOPBP1 ENSGALG00000034461 3094 0.987 - - - - - - 0.987 - - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
22. UGCG ENSGALG00000015682 2735 0.987 - - - - - - 0.987 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
23. SMPD3 ENSGALG00000034950 4335 0.986 - - - - - - 0.986 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
24. IGDCC3 ENSGALG00000007371 2434 0.986 - - - - - - 0.986 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
25. GALT ENSGALG00000026195 2002 0.986 - - - - - - 0.986 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
26. GATAD2A ENSGALG00000042900 6337 0.986 - - - - - - 0.986 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
27. BZW2 ENSGALG00000010809 29213 0.984 - - - - - - 0.984 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
28. HECTD3 ENSGALG00000010217 2513 0.978 - - - - - - 0.978 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
29. NDUFA10 ENSGALG00000004302 41948 0.974 - - - - - - 0.974 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
30. NUDCD2 ENSGALG00000001726 6303 0.965 - - - - - - 0.965 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
31. ASNS ENSGALG00000009748 11822 0.953 - - - - - - 0.953 - - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
32. CDC42 ENSGALG00000004796 59878 0.936 - - - - - - 0.936 - - - cell division cycle 42 [Source:NCBI gene;Acc:395917]
33. SUGT1 ENSGALG00000016946 22881 0.93 - - - - - - 0.930 - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
34. FBXO5 ENSGALG00000013607 6156 0.925 - - - - - - - 0.925 - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
35. PSMG1 ENSGALG00000016062 7511 0.924 - - - - - - - 0.924 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
36. CASC4 ENSGALG00000008208 8338 0.923 - - - - - - - 0.923 - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
37. LSM1 ENSGALG00000003245 4701 0.923 - - - - - - - 0.923 - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
38. CTPS1 ENSGALG00000042967 9532 0.923 - - - - - - - 0.923 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
39. NOP14 ENSGALG00000015649 7039 0.923 - - - - - - - 0.923 - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
40. DISP1 3281 0.923 - - - - - - - 0.923 - - dispatched RND transporter family member 1, transcript variant X3
41. HIGD2A ENSGALG00000003348 34109 0.923 - - - - - - - 0.923 - - HIG1 hypoxia inducible domain family member 2A
42. ORC2 ENSGALG00000008234 3361 0.923 - - - - - - - 0.923 - - origin recognition complex subunit 2 [Source:NCBI gene;Acc:424077]
43. PRMT7 ENSGALG00000038865 2666 0.923 - - - - - - - 0.923 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
44. MTMR6 ENSGALG00000017112 2214 0.923 - - - - - - - 0.923 - - myotubularin related protein 6 [Source:HGNC Symbol;Acc:HGNC:7453]
45. CCNYL1 ENSGALG00000008485 11958 0.922 - - - - - - - 0.922 - - cyclin Y like 1
46. MBTPS1 ENSGALG00000003293 4843 0.922 - - - - - - - 0.922 - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
47. EXTL3 ENSGALG00000016630 1916 0.922 - - - - - - - 0.922 - - exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
48. GPR89 GPR89 2253 0.922 - - - - - - - 0.922 - -
49. TBC1D12 ENSGALG00000034044 5588 0.922 - - - - - - - 0.922 - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
50. Sep-11 Sep-11 2005 0.922 - - - - - - - 0.922 - -
51. SAFB ENSGALG00000013365 3175 0.922 - - - - - - - 0.922 - - scaffold attachment factor B, transcript variant X1
52. LARP1B ENSGALG00000010207 2935 0.922 - - - - - - - 0.922 - - La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
53. DDX55 ENSGALG00000003298 2315 0.922 - - - - - - - 0.922 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
54. ENGASE ENSGALG00000011816 1763 0.921 - - - - - - - 0.921 - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
55. JMJD1C ENSGALG00000002942 4556 0.921 - - - - - - - 0.921 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
56. GOLGA2 ENSGALG00000004881 677 0.921 - - - - - - - 0.921 - - golgin A2, transcript variant X7
57. BAG2 ENSGALG00000026605 3898 0.921 - - - - - - - 0.921 - - BCL2 associated athanogene 2
58. KDM2B ENSGALG00000004225 11513 0.921 - - - - - - - 0.921 - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
59. RPTOR ENSGALG00000034210 982 0.921 - - - - - - - 0.921 - - regulatory associated protein of MTOR complex 1 [Source:HGNC Symbol;Acc:HGNC:30287]
60. ADAM9 ENSGALG00000003398 1299 0.921 - - - - - - - 0.921 - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
61. PSMD5 ENSGALG00000001637 6812 0.92 - - - - - - - 0.920 - - proteasome 26S subunit, non-ATPase 5 [Source:NCBI gene;Acc:417125]
62. ESF1 ENSGALG00000034768 8610 0.919 - - - - - - - 0.919 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
63. DAK DAK 13208 0.918 - - - - - - - 0.918 - -
64. NUDC ENSGALG00000000895 17844 0.918 - - - - - - - 0.918 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
65. PARP16 ENSGALG00000007365 9467 0.918 - - - - - - - 0.918 - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
66. TNRC18 ENSGALG00000040770 4061 0.916 - - - - - - - 0.916 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
67. SF3B6 ENSGALG00000016501 28236 0.91 - - - - - - 0.910 - - - splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
68. ACO1 ENSGALG00000002162 6645 0.907 - - - - - - - 0.907 - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
69. IDH1 ENSGALG00000008818 17613 0.906 - - - - - - 0.906 - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
70. MCM5 ENSGALG00000012546 18254 0.897 - - - - - - - 0.897 - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
71. EIF2B1 ENSGALG00000003259 9491 0.895 - - - - - - - 0.895 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
72. SH3BGRL3 ENSGALG00000038536 18187 0.894 - - - - - - - 0.894 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
73. CDH5 ENSGALG00000032349 8526 0.892 - - - - - - - 0.892 - - cadherin 5 [Source:NCBI gene;Acc:374068]
74. CTNND2 ENSGALG00000013001 11217 0.885 - - - - - - - 0.885 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
75. DTD1 ENSGALG00000008808 10807 0.88 - - - - - - - 0.880 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
76. TTC4 10377 0.868 - - - - - - - 0.868 - - tetratricopeptide repeat domain 4
77. BCCIP ENSGALG00000006617 13291 0.867 - - - - - - - 0.867 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
78. SRSF6 ENSGALG00000000990 12424 0.866 - - - - - - - 0.866 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
79. TAF3 ENSGALG00000006731 15569 0.866 - - - - - - - 0.866 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
80. SKP2 ENSGALG00000003547 14637 0.863 - - - - - - - 0.863 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
81. FKBP9 ENSGALG00000037669 12079 0.854 - - - - - - - 0.854 - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
82. PARL ENSGALG00000002315 15943 0.848 - - - - - - - 0.848 - - presenilin associated rhomboid like
83. ATP1A1 ENSGALG00000032247 15898 0.844 - - - - - - - 0.844 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
84. EIF4EBP1 ENSGALG00000003205 89048 0.842 - - - - - - 0.842 - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
85. TM9SF3 ENSGALG00000005534 15290 0.835 - - - - - - - 0.835 - - transmembrane 9 superfamily member 3
86. HDAC2 ENSGALG00000014991 23458 0.824 - - - - - - - 0.824 - - histone deacetylase 2 [Source:NCBI gene;Acc:395635]
87. SPARC ENSGALG00000004184 36410 0.819 - - - - - - - 0.819 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
88. COPS5 ENSGALG00000030843 11942 0.812 - - - - - - - 0.812 - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
89. MPHOSPH10 ENSGALG00000003906 7029 0.81 - - - - - - - 0.810 - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
90. DNAJC25 ENSGALG00000015684 4554 0.798 - - - - - - 0.798 - - - DnaJ heat shock protein family (Hsp40) member C25
91. TRAM1 ENSGALG00000041112 22876 0.797 - - - - - - - 0.797 - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
92. SLC25A30 ENSGALG00000016979 2625 0.79 - - - - - - - 0.790 - - solute carrier family 25 member 30 [Source:HGNC Symbol;Acc:HGNC:27371]
93. HNRNPH3 ENSGALG00000003947 28724 0.788 - - - - - - - 0.788 - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
94. C2orf47 C2orf47 17769 0.785 - - - - - - - 0.785 - -
95. METRNL ENSGALG00000028354 25565 0.783 - - - - - - - 0.783 - - meteorin like, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:27584]
96. FAF2 ENSGALG00000003331 4776 0.78 - - - - - - - 0.780 - - Fas associated factor family member 2 [Source:HGNC Symbol;Acc:HGNC:24666]
97. AKAP1 ENSGALG00000005575 12051 0.776 - - - - - - - 0.776 - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
98. GMPPA ENSGALG00000002417 10383 0.776 - - - - - - - 0.776 - - GDP-mannose pyrophosphorylase A, transcript variant X2
99. LAP3 ENSGALG00000006334 21076 0.77 - - - - - - - 0.770 - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
100. ENSGALG00000028992 ENSGALG00000028992 185077 0.769 - - - - - - - 0.769 - -

There are 29 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA