Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSM14B

Gene Name Gene ID Reads Annotation
LSM14B ENSGALG00000005125 31 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]











Genes with expression patterns similar to LSM14B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSM14B ENSGALG00000005125 31 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
2. HDAC3 ENSGALG00000002634 130 1.847 - - 0.847 - - - 1.000 - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
3. CDCP1 ENSGALG00000040447 47 1.646 - - 0.874 - - 0.772 - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
4. SORL1 ENSGALG00000006598 39 1.603 - - - - - - 0.722 - - 0.881 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
5. CLGN ENSGALG00000009826 54 1.484 - - 0.750 - - - - - - 0.734 calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
6. NTF3 ENSGALG00000027299 72 1.477 - - - - - 0.725 - - - 0.752 neurotrophin 3 [Source:NCBI gene;Acc:428099]
7. HTR4 ENSGALG00000001383 2 1 - - - - - - 1.000 - - - 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299]
8. CIPC ENSGALG00000010390 2 1 - - - - - - 1.000 - - - CLOCK interacting pacemaker [Source:HGNC Symbol;Acc:HGNC:20365]
9. PTCHD3 ENSGALG00000023347 5 1 - - - - - - 1.000 - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
10. ADAMTS10 ENSGALG00000033157 243 1 - - - - - - 1.000 - - - ADAM metallopeptidase with thrombospondin type 1 motif 10 [Source:HGNC Symbol;Acc:HGNC:13201]
11. ENSGALG00000025727 ENSGALG00000025727 26 1 - - - - - - 1.000 - - -
12. HS6ST2 ENSGALG00000034250 42 1 - - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 2 [Source:NCBI gene;Acc:395150]
13. CHIC2 ENSGALG00000013931 21 1 - - - - - - 1.000 - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
14. ZEB2 ENSGALG00000040465 315 1 - - - - - - 1.000 - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
15. LOC100858797 ENSGALG00000027167 7 1 - - - - - - 1.000 - - - feather keratin 1-like, transcript variant X1
16. PEAR1 ENSGALG00000028622 127 1 - - - - - - 1.000 - - - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
17. PEX5L ENSGALG00000043386 5 1 - - - - - - 1.000 - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
18. AIFM3 ENSGALG00000007720 28 1 - - - - - - 1.000 - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
19. WNT3A ENSGALG00000042657 22 1 - - - - - - 1.000 - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
20. CLDN18 ENSGALG00000006593 77 1 - - - - - - 1.000 - - - claudin 18 [Source:HGNC Symbol;Acc:HGNC:2039]
21. ADGB ENSGALG00000012317 28 1 - - - - - - 1.000 - - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
22. ANKFY1 ENSGALG00000001467 21 1 - - - - - - 1.000 - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
23. PFN4 ENSGALG00000019866 53 1 - - - - - - 1.000 - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
24. TMEM45B ENSGALG00000001203 48 1 - - - - - - 1.000 - - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
25. C1orf131 C1orf131 141 1 - - - - - - 1.000 - - -
26. C1orf112 ENSGALG00000032743 8 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
27. RS1 ENSGALG00000016523 11 1 - - - - - - 1.000 - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
28. ENSGALG00000014620 ENSGALG00000014620 7 1 - - - - - - 1.000 - - -
29. GRB10 ENSGALG00000013100 37 1 - - - - - - 1.000 - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
30. MAPK8IP3 ENSGALG00000029514 57 1 - - - - - - 1.000 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
31. PTHRP PTHRP 8 1 - - - - - - 1.000 - - -
32. MTMR3 ENSGALG00000008051 9 1 - - - - - - 1.000 - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
33. ENSGALG00000012217 ENSGALG00000012217 8 0.943 - - - - - - 0.943 - - -
34. SCN4B ENSGALG00000007409 22 0.938 - - 0.938 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
35. C1orf168 C1orf168 98 0.932 - - 0.932 - - - - - - -
36. ZP2 ENSGALG00000002428 10 0.928 - - 0.928 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
37. GATA4 ENSGALG00000016662 6 0.927 - - 0.927 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
38. VEPH1 ENSGALG00000009682 51 0.927 - - 0.927 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
39. DENND6B ENSGALG00000043771 22 0.927 - - 0.927 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
40. UIMC1 ENSGALG00000001158 22 0.923 - - 0.923 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
41. CACNA1D ENSGALG00000005332 34 0.922 - - 0.922 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
42. PLA1A ENSGALG00000014997 152 0.918 - - 0.918 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
43. TRAF3IP3 ENSGALG00000001373 11 0.918 - - 0.918 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
44. TPTE2 ENSGALG00000017031 29 0.916 - - 0.916 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
45. CAPN6 ENSGALG00000008006 16 0.916 - - 0.916 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
46. ABCC13 ENSGALG00000015675 66 0.915 - - 0.915 - - - - - - - ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1
47. GP1BB ENSGALG00000021529 348 0.911 - - - - - 0.911 - - - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
48. ELMOD2 ENSGALG00000009836 177 0.91 - - 0.910 - - - - - - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
49. CENPQ ENSGALG00000016692 293 0.907 - - 0.907 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
50. ICMT ENSGALG00000024053 10 0.906 - - 0.906 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
51. PLEKHA1 ENSGALG00000034548 34 0.905 - - 0.905 - - - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
52. KIAA1841 ENSGALG00000007825 22 0.901 - - 0.901 - - - - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
53. WNK1 ENSGALG00000012992 67 0.9 - - 0.900 - - - - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
54. KNDC1 ENSGALG00000007007 31 0.899 - - 0.899 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
55. STX19 ENSGALG00000015413 28 0.898 - - 0.898 - - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
56. FUK ENSGALG00000002648 9 0.897 - - 0.897 - - - - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
57. FGF22 ENSGALG00000041822 37 0.895 - - 0.895 - - - - - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
58. ARHGAP15 ENSGALG00000012421 58 0.895 - - - - - - - - - 0.895 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
59. ATP8B1 ENSGALG00000030834 521 0.893 - - 0.893 - - - - - - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
60. VWA2 ENSGALG00000008980 52 0.892 - - 0.892 - - - - - - - von Willebrand factor A domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24709]
61. PLCZ1 ENSGALG00000013123 3 0.892 - - - - - 0.892 - - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
62. SMOX ENSGALG00000015977 18 0.892 - - - - - 0.892 - - - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
63. FTO ENSGALG00000041036 11 0.892 - - - - - 0.892 - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
64. ADAMTS12 55 0.892 - - - - - 0.892 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
65. ENSGALG00000007846 ENSGALG00000007846 2 0.892 - - - - - 0.892 - - - -
66. SLC35F5 ENSGALG00000012166 25 0.892 - - - - - 0.892 - - - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
67. NSUN7 ENSGALG00000014264 4 0.892 - - - - - 0.892 - - - - NOP2/Sun RNA methyltransferase family member 7 [Source:HGNC Symbol;Acc:HGNC:25857]
68. ENSGALG00000004619 ENSGALG00000004619 3 0.892 - - - - - 0.892 - - - -
69. C21orf62 ENSGALG00000040059 5 0.892 - - - - - 0.892 - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
70. TEX11 ENSGALG00000005775 58 0.892 - - 0.892 - - - - - - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
71. STEAP1 ENSGALG00000009006 16 0.892 - - - - - 0.892 - - - - STEAP family member 1
72. ENSGALG00000006504 ENSGALG00000006504 3 0.892 - - - - - 0.892 - - - -
73. KCNJ15 ENSGALG00000016055 66 0.892 - - - - - 0.892 - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
74. STK32A ENSGALG00000029195 27 0.891 - - - - - - 0.891 - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
75. SNX25 ENSGALG00000010610 31 0.891 - - - - - - 0.891 - - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
76. LOC100857512 ENSGALG00000026070 561 0.889 - - 0.889 - - - - - - - death-associated protein kinase 2-like, transcript variant X2
77. CYR61 ENSGALG00000008661 43 0.887 - - - - - 0.887 - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
78. PRKCB ENSGALG00000037943 29 0.887 - - - - - 0.887 - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
79. TMEM82 16 0.887 - - - - - 0.887 - - - - transmembrane protein 82, transcript variant X2
80. MVK ENSGALG00000013848 239 0.887 - - 0.887 - - - - - - - mevalonate kinase [Source:HGNC Symbol;Acc:HGNC:7530]
81. LRIG1 ENSGALG00000007483 19 0.884 - - 0.884 - - - - - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
82. CC2D1B ENSGALG00000010619 66 0.883 - - - - - 0.883 - - - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
83. KCNK4 ENSGALG00000012021 200 0.882 - - - - - 0.882 - - - - potassium channel, subfamily K, member 4, transcript variant X3
84. FBXL4 ENSGALG00000015490 12 0.88 - - - - - 0.880 - - - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
85. DNAH5L ENSGALG00000013268 61 0.878 - - - - - 0.878 - - - - dynein axonemal heavy chain 5-like
86. ENSGALG00000021386 ENSGALG00000021386 29 0.877 - - 0.877 - - - - - - -
87. FADD ENSGALG00000007625 142 0.876 - - 0.876 - - - - - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
88. CRK ENSGALG00000002656 15 0.875 - - 0.875 - - - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
89. CR1L ENSGALG00000023950 98 0.875 - - 0.875 - - - - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
90. ENSGALG00000000193 ENSGALG00000000193 19 0.873 - - - - - 0.873 - - - -
91. PIGZ ENSGALG00000026294 99 0.872 - - - - - - 0.872 - - - phosphatidylinositol glycan anchor biosynthesis class Z, transcript variant X2
92. ENSGALG00000024413 ENSGALG00000024413 13 0.872 - - - - - - 0.872 - - -
93. N4BP2L1 ENSGALG00000017072 1371 0.872 - - 0.872 - - - - - - - NEDD4 binding protein 2 like 1, transcript variant X2
94. FAM26E 37 0.872 - - 0.872 - - - - - - - family with sequence similarity 26 member E
95. STK38 ENSGALG00000000523 44 0.87 - - - - - 0.870 - - - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
96. DLEC1 ENSGALG00000005826 23 0.869 - - 0.869 - - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
97. LMCD1 ENSGALG00000008349 928 0.869 - - 0.869 - - - - - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
98. IKZF1 ENSGALG00000013086 58 0.869 - - - - - - - - - 0.869 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
99. CILP ENSGALG00000007358 20 0.868 - - - - - - 0.868 - - - cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
100. ENSGALG00000020779 ENSGALG00000020779 19 0.864 - - - - - 0.864 - - - -

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA