Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRIF1

Gene Name Gene ID Reads Annotation
LRIF1 ENSGALG00000000106 256 ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:HGNC:30299]











Genes with expression patterns similar to LRIF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRIF1 ENSGALG00000000106 256 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:HGNC:30299]
2. ANKEF1 ENSGALG00000008996 12 0.907 - - - - - - - 0.907 - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
3. FMOD ENSGALG00000034067 165 0.886 - - - - - - - 0.886 - - fibromodulin [Source:NCBI gene;Acc:395814]
4. OXR1 44 0.84 - - - - - - - 0.840 - - oxidation resistance 1, transcript variant X7
5. TPH2 ENSGALG00000010198 5 0.814 - - - - - - - 0.814 - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
6. SS4R SS4R 19 0.814 - - - - - - - 0.814 - -
7. GPCPD1 ENSGALG00000009130 24 0.81 - - 0.810 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
8. FAM173A ENSGALG00000021364 4 0.808 - - - - - - - 0.808 - - family with sequence similarity 173 member A [Source:NCBI gene;Acc:416404]
9. ENSGALG00000019568 ENSGALG00000019568 25 0.807 - - 0.807 - - - - - - -
10. AKAP6 ENSGALG00000009995 77 0.805 - - 0.805 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
11. SLITRK2 ENSGALG00000009192 51 0.805 - - 0.805 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
12. KIF5C ENSGALG00000012462 167 0.802 - - - - - - - - - 0.802 kinesin family member 5C [Source:NCBI gene;Acc:408046]
13. AGBL2 ENSGALG00000029618 8 0.796 - - 0.796 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
14. GPHB5 ENSGALG00000028839 45 0.794 - - - - - - - 0.794 - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
15. XYLB ENSGALG00000006173 23 0.794 - - 0.794 - - - - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
16. ADAMTSL2 ENSGALG00000002955 5 0.792 - - - - - - 0.792 - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
17. FGG ENSGALG00000009268 418 0.792 - - - - - - 0.792 - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
18. U2 U2 89 0.792 - - - - - - 0.792 - - -
19. NID1 ENSGALG00000042079 89 0.792 - - - - - - 0.792 - - - nidogen 1 [Source:HGNC Symbol;Acc:HGNC:7821]
20. RAB3GAP2 ENSGALG00000009503 36 0.792 - - - - - - 0.792 - - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
21. UPK3A ENSGALG00000014227 7 0.792 - - - - - - 0.792 - - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
22. AHR2 ENSGALG00000023742 21 0.792 - - - - - - 0.792 - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
23. RGNL ENSGALG00000016722 3 0.792 - - - - - - 0.792 - - - regucalcin-like, transcript variant X4
24. ENSGALG00000013318 ENSGALG00000013318 8 0.792 - - - - - - 0.792 - - -
25. LRRC43 LRRC43 16 0.791 - - 0.791 - - - - - - -
26. EPHA10 ENSGALG00000001912 5 0.791 - - 0.791 - - - - - - - EPH receptor A10, transcript variant X1
27. ENSGALG00000020389 ENSGALG00000020389 5 0.791 - - 0.791 - - - - - - -
28. SLC6A18 ENSGALG00000013180 6 0.791 - - 0.791 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
29. EPB41L5 ENSGALG00000011605 18 0.79 - - - - - - - 0.790 - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
30. FGF7 ENSGALG00000028158 189 0.79 - - - - - - - 0.790 - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
31. KANSL1L ENSGALG00000002866 44 0.789 - - 0.789 - - - - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
32. SLC20A1 ENSGALG00000013740 40 0.786 - - - - - - 0.786 - - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
33. EZH1 ENSGALG00000003068 30 0.786 - - - - - - 0.786 - - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3526]
34. ASTL ENSGALG00000037220 2775 0.785 - - 0.785 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
35. FAM69A ENSGALG00000005918 157 0.784 - - 0.784 - - - - - - - family with sequence similarity 69 member A, transcript variant X4
36. ENSGALG00000017269 ENSGALG00000017269 13 0.784 - - 0.784 - - - - - - -
37. HMGCLL1 ENSGALG00000016294 33 0.783 - - - - - - - 0.783 - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
38. SPAG6 ENSGALG00000007892 80 0.782 - - - - - - - 0.782 - - sperm associated antigen 6 [Source:NCBI gene;Acc:420505]
39. PCDH15 ENSGALG00000002744 34 0.782 - - - - - - 0.782 - - - protocadherin related 15 [Source:NCBI gene;Acc:423644]
40. RHOBTB1 ENSGALG00000003073 56 0.782 - - - - - - - - - 0.782 Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
41. KLHL23 ENSGALG00000020737 13 0.782 - - 0.782 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
42. STXBP4 ENSGALG00000003033 59 0.78 - - - - - - 0.780 - - - syntaxin binding protein 4 [Source:HGNC Symbol;Acc:HGNC:19694]
43. GALNT11 ENSGALG00000006233 210 0.78 - - - - - - - 0.780 - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
44. ADAMTS15 ENSGALG00000001407 11 0.779 - - 0.779 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
45. ENSGALG00000026461 ENSGALG00000026461 61 0.779 - - 0.779 - - - - - - -
46. AGMO ENSGALG00000010792 76 0.777 - - - - - - 0.777 - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
47. ZDHHC15 ENSGALG00000007800 24 0.777 - - 0.777 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
48. ZDHHC18 ENSGALG00000034910 16 0.776 - - - - - - - 0.776 - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
49. C-MYB C-MYB 734 0.776 - - - - - - - 0.776 - -
50. BLVRA ENSGALG00000031786 23 0.775 - - 0.775 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
51. DRD4 ENSGALG00000040761 79 0.771 - - - - - - 0.771 - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
52. SVOPL ENSGALG00000012812 27 0.77 - - 0.770 - - - - - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
53. NSUN6 ENSGALG00000008564 9 0.77 - - 0.770 - - - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
54. ENSGALG00000028038 ENSGALG00000028038 9 0.768 - - 0.768 - - - - - - -
55. PNPLA2 ENSGALG00000014569 7 0.768 - - 0.768 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
56. UBA2 ENSGALG00000005006 243 0.767 - - - - - - - 0.767 - - ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
57. NFXL1 ENSGALG00000014138 36 0.767 - - 0.767 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
58. MYH13 4 0.766 - - - - - - - 0.766 - - myosin, heavy chain 13, skeletal muscle
59. TRERF1 ENSGALG00000009896 42 0.766 - - - - - - - 0.766 - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
60. GLYCTK ENSGALG00000004018 5 0.766 - - - - - - - 0.766 - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
61. CACNA1I ENSGALG00000035051 27 0.766 - - - - - - - 0.766 - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
62. FOXE3 11 0.766 - - - - - - - 0.766 - - forkhead box E3
63. ENSGALG00000026135 ENSGALG00000026135 16 0.766 - - - - - - - 0.766 - -
64. PFKFB2 ENSGALG00000001117 2 0.766 - - - - - - - 0.766 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
65. ABL2 ENSGALG00000030357 39 0.766 - - - - - - - 0.766 - - ABL proto-oncogene 2, non-receptor tyrosine kinase, transcript variant X2
66. TUBB3 571 0.766 - - - - - - - 0.766 - - tubulin beta 3 class III
67. PDE1C ENSGALG00000039935 16 0.764 - - 0.764 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
68. ENSGALG00000027597 ENSGALG00000027597 13 0.764 - - - - - - - 0.764 - -
69. gga-mir-1466 ENSGALG00000025170 487 0.764 - - - - - - - 0.764 - - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
70. RNASET2 ENSGALG00000011426 40 0.762 - - 0.762 - - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
71. LEF-1 LEF-1 411 0.761 - - - - - - - 0.761 - -
72. MTMR3 ENSGALG00000008051 9 0.761 - - 0.761 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
73. GTPBP8 ENSGALG00000015190 21 0.76 - - 0.760 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
74. PLXNA4 ENSGALG00000006473 125 0.76 - - - - - - - 0.760 - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
75. EVI2A ENSGALG00000039084 13 0.76 - - - - - - - 0.760 - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
76. OGDHL ENSGALG00000002266 57 0.76 - - 0.760 - - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
77. DLG2 56 0.758 - - - - - - 0.758 - - - discs large MAGUK scaffold protein 2, transcript variant X24
78. STK17B ENSGALG00000007924 519 0.758 - - - - 0.758 - - - - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
79. TRPA1 ENSGALG00000034751 148 0.756 - - 0.756 - - - - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
80. FBXO16 7 0.756 - - 0.756 - - - - - - - F-box protein 16, transcript variant X1
81. LAMB4 ENSGALG00000007917 54 0.755 - - 0.755 - - - - - - - laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
82. NMRAL1 ENSGALG00000029820 29 0.75 - - 0.750 - - - - - - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
83. SK2 SK2 74 0.749 - - - - - - 0.749 - - -
84. STARD10 ENSGALG00000002577 245 0.748 - - - - - - - 0.748 - - StAR related lipid transfer domain containing 10
85. PRLR ENSGALG00000003446 19 0.747 - - 0.747 - - - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
86. GK ENSGALG00000016285 35 0.746 - - - - - - - 0.746 - - glycerol kinase, transcript variant X4
87. DAW1 ENSGALG00000002992 112 0.746 - - - - - - 0.746 - - - dynein assembly factor with WD repeats 1 [Source:HGNC Symbol;Acc:HGNC:26383]
88. RBM46 ENSGALG00000009278 98 0.744 - - - - - - 0.744 - - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
89. KIAA1045 KIAA1045 23 0.74 - - - - - - - - - 0.740
90. EPHB1 ENSGALG00000006609 346 0.74 - - - - - - - - - 0.740 EPH receptor B1, transcript variant X2
91. KIAA1024L ENSGALG00000027692 20 0.739 - - - - - - 0.739 - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
92. PRSS12 ENSGALG00000012004 53 0.739 - - - - - - 0.739 - - - serine protease 12 [Source:HGNC Symbol;Acc:HGNC:9477]
93. RTDR1 RTDR1 104 0.738 - - - - - - - 0.738 - -
94. TMEM161B ENSGALG00000010896 36 0.738 - - 0.738 - - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
95. HERPUD1 ENSGALG00000001220 18 0.736 - - 0.736 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
96. ATP2C1 ENSGALG00000034340 32 0.733 - - - - - - 0.733 - - - ATPase secretory pathway Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:13211]
97. RGMB ENSGALG00000015284 14 0.733 - - 0.733 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
98. ZAR1 ENSGALG00000035565 141 0.732 - - 0.732 - - - - - - - zygote arrest 1 [Source:HGNC Symbol;Acc:HGNC:20436]
99. SHPRH ENSGALG00000012289 992 0.732 - - 0.732 - - - - - - - SNF2 histone linker PHD RING helicase [Source:HGNC Symbol;Acc:HGNC:19336]
100. UEVLD ENSGALG00000006342 164 0.732 - - - - - - 0.732 - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA