Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMO7

Gene Name Gene ID Reads Annotation
LMO7 ENSGALG00000016920 3809 LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]











Genes with expression patterns similar to LMO7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMO7 ENSGALG00000016920 3809 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
2. C9orf89 C9orf89 3056 1.768 - - - - - - - 0.994 - 0.774
3. SPATA20 ENSGALG00000006857 3506 1.759 - - - - - - - 0.952 - 0.807 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
4. VEGFC ENSGALG00000010847 2197 1.739 - - - - - - 0.745 0.994 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
5. FARP1 ENSGALG00000016886 13132 1.685 - - - - - - 0.739 0.946 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
6. COL5A2 ENSGALG00000031112 18358 1.47 - - - - - - 0.711 - - 0.759 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
7. RDH10 ENSGALG00000034346 15285 1.418 - - - - - 0.718 0.700 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
8. KLHDC2 ENSGALG00000012244 12903 0.996 - - - - - - - 0.996 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
9. PHAX ENSGALG00000014691 8114 0.995 - - - - - - - 0.995 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
10. SLBP ENSGALG00000015712 5586 0.995 - - - - - - - 0.995 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
11. RRBP1 ENSGALG00000008676 5376 0.995 - - - - - - - 0.995 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
12. CTU2 4818 0.995 - - - - - - - 0.995 - - cytosolic thiouridylase subunit 2, transcript variant X3
13. ADAR ENSGALG00000021475 6004 0.995 - - - - - - - 0.995 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
14. CWC22 ENSGALG00000009001 5984 0.994 - - - - - - - 0.994 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
15. TNFRSF21 ENSGALG00000016719 2762 0.994 - - - - - - - 0.994 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
16. FAT1 ENSGALG00000013579 6030 0.994 - - - - - - - 0.994 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
17. USP42 ENSGALG00000003378 1392 0.994 - - - - - - - 0.994 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
18. SIN3A ENSGALG00000001644 1141 0.994 - - - - - - - 0.994 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
19. PRRX2 ENSGALG00000028236 1990 0.994 - - - - - - - 0.994 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
20. ENSGALG00000028413 ENSGALG00000028413 551 0.994 - - - - - - - 0.994 - -
21. TDRD1 ENSGALG00000046180 612 0.994 - - - - - - - 0.994 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
22. PPAT ENSGALG00000013728 7563 0.994 - - - - - - - 0.994 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
23. STAMBP ENSGALG00000042555 1362 0.994 - - - - - - - 0.994 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
24. INTS2 ENSGALG00000005269 6966 0.994 - - - - - - - 0.994 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
25. VPS36 ENSGALG00000017026 3658 0.994 - - - - - - - 0.994 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
26. GNA12 ENSGALG00000004368 692 0.994 - - - - - - - 0.994 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
27. SLC52A3 ENSGALG00000006194 3952 0.994 - - - - - - - 0.994 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
28. ZNF462 ENSGALG00000015451 12653 0.994 - - - - - - - 0.994 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
29. USP30 ENSGALG00000040265 2000 0.994 - - - - - - - 0.994 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
30. CREB1 ENSGALG00000008494 2219 0.994 - - - - - - - 0.994 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
31. TMEM69 ENSGALG00000010279 716 0.994 - - - - - - - 0.994 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
32. PTK7 ENSGALG00000008609 8081 0.992 - - - - - - - 0.992 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
33. PDCD6 ENSGALG00000013400 7611 0.992 - - - - - - - 0.992 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
34. GYG1 ENSGALG00000035535 6311 0.991 - - - - - - - 0.991 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
35. WDFY3 10775 0.989 - - - - - - - 0.989 - - WD repeat and FYVE domain containing 3, transcript variant X7
36. MAP4K3 ENSGALG00000039720 5124 0.983 - - - - - - - 0.983 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
37. LAMTOR2 ENSGALG00000029881 35356 0.974 - - - - - - - 0.974 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
38. NAA30 ENSGALG00000012098 4681 0.972 - - - - - - - 0.972 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
39. ACTR6 ENSGALG00000040976 31271 0.966 - - - - - - - 0.966 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
40. CPSF4 ENSGALG00000004714 14353 0.954 - - - - - - - 0.954 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
41. NSUN4 ENSGALG00000010360 3567 0.954 - - - - - - - 0.954 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
42. BMP4 ENSGALG00000012429 4306 0.953 - - - - - - - 0.953 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
43. C11orf57 C11orf57 4971 0.952 - - - - - - - 0.952 - -
44. RPL7L1 ENSGALG00000011974 20292 0.949 - - - - - - - 0.949 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
45. MCM6 ENSGALG00000012348 12523 0.946 - - - - - - - 0.946 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
46. CSNK2A1 ENSGALG00000006197 41409 0.946 - - - - - - - 0.946 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
47. TIMM23B ENSGALG00000002089 8122 0.944 - - - - - - - 0.944 - - translocase of inner mitochondrial membrane 23 homolog B
48. PDCL3 ENSGALG00000016772 14897 0.941 - - - - - - - 0.941 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
49. MGST1 ENSGALG00000013098 17632 0.938 - - - - - - - 0.938 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
50. MYBL2 ENSGALG00000003503 15875 0.935 - - - - - - - 0.935 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
51. MED6 ENSGALG00000029743 9414 0.933 - - - - - - - 0.933 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
52. HSPA12A ENSGALG00000009248 7783 0.933 - - - - - - - 0.933 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
53. LAPTM4A ENSGALG00000016479 15973 0.931 - - - - - - - 0.931 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
54. ZNF367 ENSGALG00000012629 3215 0.93 - - - - - - - 0.930 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
55. DHCR24 ENSGALG00000010798 3963 0.927 - - - - - - - 0.927 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
56. THRAP3 ENSGALG00000002144 21958 0.926 - - - - - - - 0.926 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
57. DERL1 ENSGALG00000033950 15074 0.901 - - - - - - - 0.901 - - derlin 1 [Source:NCBI gene;Acc:420350]
58. TAF15 ENSGALG00000002060 12320 0.893 - - - - - - - 0.893 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
59. SPERT ENSGALG00000016981 145 0.891 - - - - - - - - - 0.891 spermatid associated [Source:NCBI gene;Acc:418848]
60. TRAPPC12 ENSGALG00000016387 2593 0.891 - - - - - - - - - 0.891 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
61. CKAP4 ENSGALG00000012659 36398 0.889 - - - - - - - 0.889 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
62. TMEM199 ENSGALG00000023757 10781 0.885 - - - - - - - 0.885 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
63. GLO1 ENSGALG00000010127 31662 0.881 - - - - - - - 0.881 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
64. MTDH ENSGALG00000034050 9525 0.876 - - - - - - - - - 0.876 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
65. SUN1 ENSGALG00000003781 3442 0.872 - - - - - - - - - 0.872 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
66. ATP6V0B ENSGALG00000010091 14901 0.87 - - - - - - - 0.870 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
67. FBXO9 ENSGALG00000016320 9600 0.868 - - - - - - - 0.868 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
68. SH3BP2 ENSGALG00000015665 431 0.868 - - - - - - - - - 0.868 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
69. EIF1 ENSGALG00000028517 124882 0.865 - - - - - - - 0.865 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
70. ARID1B ENSGALG00000013683 3397 0.864 - - - - - - - - - 0.864 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
71. ANP32E ENSGALG00000039891 35925 0.848 - - - - - - - 0.848 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
72. MAD2L1BP ENSGALG00000027871 7835 0.845 - - - - - - - 0.845 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
73. GTLF3B GTLF3B 5079 0.845 - - - - - - - 0.845 - -
74. KLC1 ENSGALG00000011528 1621 0.842 - - - - - - - - - 0.842 kinesin light chain 1, transcript variant X6
75. AIMP1 ENSGALG00000010553 17994 0.841 - - - - - - - - - 0.841 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
76. CUL5 ENSGALG00000017165 2480 0.841 - - - - - - - - - 0.841 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
77. USMG5 ENSGALG00000034645 33263 0.837 - - - - - - - - - 0.837 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
78. ATP5MC1 ENSGALG00000001330 37766 0.835 - - - - - - - 0.835 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
79. DLD ENSGALG00000007931 11011 0.834 - - - - - - - - - 0.834 dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
80. ARHGEF7 ENSGALG00000031009 10090 0.833 - - - - - - - 0.833 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
81. KPNA4 ENSGALG00000009549 3674 0.832 - - - - - - 0.832 - - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
82. ANKRD46 ENSGALG00000041445 3791 0.828 - - - - - - - - - 0.828 ankyrin repeat domain 46, transcript variant X1
83. U3 U3 1604 0.826 - - - - - - - - - 0.826
84. ENSGALG00000021694 ENSGALG00000021694 26011 0.824 - - - - - - - 0.824 - -
85. FABP6 ENSGALG00000001445 1254 0.823 - - - - - 0.823 - - - - fatty acid binding protein 6 [Source:NCBI gene;Acc:416154]
86. UPF2 ENSGALG00000033772 9548 0.822 - - - - - - - 0.822 - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
87. RBM17 ENSGALG00000006332 12656 0.82 - - - - - - - 0.820 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
88. CCNI ENSGALG00000011457 3203 0.82 - - - - - - - - - 0.820 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
89. EIF5 ENSGALG00000011464 62584 0.818 - - - - - - - 0.818 - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
90. POLR2E ENSGALG00000002591 26405 0.818 - - - - - - - 0.818 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
91. TRA2B ENSGALG00000006531 40566 0.815 - - - - - - - 0.815 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
92. COMMD1 ENSGALG00000008931 12202 0.811 - - - - - - - - - 0.811 copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
93. KIDINS220 ENSGALG00000016409 854 0.809 - - - - - - - - - 0.809 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
94. EAPP ENSGALG00000010007 5080 0.806 - - - - - - - - - 0.806 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
95. FAM72A ENSGALG00000000791 17723 0.8 - - - - - - - - - 0.800 family with sequence similarity 72 member A, transcript variant X1
96. CRNKL1 ENSGALG00000008429 7280 0.798 - - - - - - - - - 0.798 crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
97. GTSE1 ENSGALG00000004897 2865 0.795 - - - - - - - - - 0.795 G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
98. WDR12 ENSGALG00000008470 7654 0.793 - - - - - - - - - 0.793 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
99. HELLS ENSGALG00000005451 7094 0.789 - - - - - - - - - 0.789 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
100. NDUFV2 ENSGALG00000036625 29234 0.789 - - - - - - - 0.789 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]

There are 106 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA