Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIMK1

Gene Name Gene ID Reads Annotation
LIMK1 ENSGALG00000001076 1931 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]











Genes with expression patterns similar to LIMK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIMK1 ENSGALG00000001076 1931 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
2. ZFHX3 ENSGALG00000000713 2340 1.665 - - - - - - 0.773 - - 0.892 zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
3. LUZP1 ENSGALG00000025858 947 1.624 - - - - - - 0.752 - - 0.872 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
4. YPEL5 ENSGALG00000009047 3308 1.498 - - - - - - - 0.739 - 0.759 yippee like 5 [Source:NCBI gene;Acc:421299]
5. MICALL1 ENSGALG00000012265 3753 1.459 - - - - - - 0.737 - - 0.722 MICAL like 1 [Source:NCBI gene;Acc:418032]
6. MCM3AP ENSGALG00000004363 3247 1.431 - - - - - - 0.710 - - 0.721 minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
7. AP3B2 2331 0.934 - - - - - - - - - 0.934 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
8. SUPV3L1 ENSGALG00000004197 4141 0.93 - - - - - - - - - 0.930 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
9. CEP57 ENSGALG00000017201 524 0.927 - - - - - - - - - 0.927 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
10. CREPT CREPT 17142 0.927 - - - - - - - - - 0.927
11. IFNAR2 ENSGALG00000041867 1596 0.927 - - - - - - - - - 0.927 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
12. SHPK ENSGALG00000004637 2386 0.925 - - - - - - - - - 0.925 sedoheptulokinase, transcript variant X1
13. RP9 ENSGALG00000035453 1186 0.924 - - - - - - - - - 0.924 retinitis pigmentosa 9 (autosomal dominant)
14. FTSJ3 ENSGALG00000032993 8929 0.923 - - - - - - - - - 0.923 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
15. ZNF142 ENSGALG00000011393 2078 0.923 - - - - - - - - - 0.923 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
16. OBFC1 OBFC1 1071 0.922 - - - - - - - - - 0.922
17. STAT5 STAT5 1796 0.921 - - - - - - - - - 0.921
18. TTI1 ENSGALG00000006791 1218 0.92 - - - - - - - - - 0.920 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
19. STX6 3297 0.92 - - - - - - - - - 0.920 syntaxin 6
20. FAM96B 14435 0.919 - - - - - - - - - 0.919 family with sequence similarity 96 member B
21. ZFPM2 ENSGALG00000040079 942 0.916 - - - - - - - - - 0.916 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
22. RGP1 ENSGALG00000002394 5937 0.916 - - - - - - - - - 0.916 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
23. ENSGALG00000018358 ENSGALG00000018358 101 0.913 - - - - - - - - - 0.913
24. BCOR ENSGALG00000016245 85 0.912 - - - - - - - - - 0.912 BCL6 corepressor, transcript variant X8
25. ADAMTS12 55 0.912 - - - - - - - - - 0.912 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
26. PTPRE ENSGALG00000009823 250 0.911 - - - - - - - - - 0.911 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
27. MAP3K8 ENSGALG00000007356 188 0.908 - - - - - - - - - 0.908 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
28. TNFRSF21 ENSGALG00000016719 2762 0.908 - - - - - - - - - 0.908 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
29. SOS2 ENSGALG00000012273 41 0.908 - - - - - - - - - 0.908 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
30. CENPJ ENSGALG00000017148 1415 0.908 - - - - - - - - - 0.908 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
31. ENSGALG00000008594 ENSGALG00000008594 54 0.907 - - - - - - - - - 0.907
32. GADD45 GADD45 8780 0.907 - - - - - - - - - 0.907
33. ENSGALG00000004772 ENSGALG00000004772 173 0.907 - - - - - - - - - 0.907
34. NFKBIE ENSGALG00000044525 633 0.907 - - - - - - - - - 0.907 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
35. CAPN15 ENSGALG00000002018 3353 0.906 - - - - - - - - - 0.906 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
36. RFWD3 2315 0.906 - - - - - - - - - 0.906 ring finger and WD repeat domain 3
37. TM6SF2 ENSGALG00000029015 109 0.906 - - - - - - - - - 0.906 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
38. PCMTD2 ENSGALG00000005901 1833 0.906 - - - - - - - - - 0.906 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
39. UBE3C ENSGALG00000006461 57 0.906 - - - - - - - - - 0.906 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
40. EEA1 ENSGALG00000011280 923 0.905 - - - - - - - - - 0.905 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
41. RPRD2 ENSGALG00000014656 939 0.904 - - - - - - - - - 0.904 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
42. ATP2B2 ENSGALG00000030908 584 0.904 - - - - - - - - - 0.904 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
43. PRKAB2 ENSGALG00000001678 1999 0.904 - - - - - - - - - 0.904 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
44. USP36 ENSGALG00000037018 783 0.903 - - - - - - - - - 0.903 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
45. AGMO ENSGALG00000010792 76 0.903 - - - - - - - - - 0.903 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
46. CNKSR3 ENSGALG00000027159 41 0.903 - - - - - - - - - 0.903 CNKSR family member 3, transcript variant X2
47. DTX2 ENSGALG00000001905 1475 0.903 - - - - - - - - - 0.903 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
48. RNF220 ENSGALG00000010109 3114 0.902 - - - - - - - - - 0.902 ring finger protein 220 [Source:NCBI gene;Acc:424580]
49. PROCR ENSGALG00000006547 645 0.902 - - - - - - - - - 0.902 protein C receptor [Source:NCBI gene;Acc:424867]
50. TFG ENSGALG00000015299 849 0.902 - - - - - - - - - 0.902 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
51. CTCF 10811 0.901 - - - - - - - - - 0.901 CCCTC-binding factor, transcript variant X2
52. MAP3K3 ENSGALG00000000525 115 0.901 - - - - - - - - - 0.901 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
53. PKDCCB ENSGALG00000011166 74 0.901 - - - - - - - - - 0.901 protein kinase domain containing, cytoplasmic b
54. TRIP4 ENSGALG00000030672 1255 0.901 - - - - - - - - - 0.901 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
55. VAV2 ENSGALG00000002699 503 0.901 - - - - - - - - - 0.901 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
56. TYSND1 ENSGALG00000033807 716 0.9 - - - - - - - - - 0.900 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
57. SERPINB6 ENSGALG00000012866 1582 0.898 - - - - - - - - - 0.898 serpin family B member 6 [Source:NCBI gene;Acc:420895]
58. SLC38A1 ENSGALG00000009698 566 0.897 - - - - - - - - - 0.897 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
59. COL12A1 ENSGALG00000015908 1300 0.896 - - - - - - - - - 0.896 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
60. PMVK ENSGALG00000046656 645 0.895 - - - - - - - - - 0.895 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
61. GRPEL2 ENSGALG00000002673 105 0.895 - - - - - - - - - 0.895 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
62. CCBL2 CCBL2 184 0.895 - - - - - - - - - 0.895
63. ALKBH1 ENSGALG00000010485 1828 0.893 - - - - - - - - - 0.893 alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
64. CTK-1 CTK-1 1618 0.893 - - - - - - - - - 0.893
65. MBD4 ENSGALG00000020747 3644 0.892 - - - - - - - - - 0.892 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
66. ENSGALG00000027621 ENSGALG00000027621 863 0.891 - - - - - - - - - 0.891
67. FOXP1 127 0.891 - - - - - - - - - 0.891 forkhead box P1, transcript variant X14
68. GPR114 GPR114 46 0.891 - - - - - - - - - 0.891
69. PDCD7 ENSGALG00000021027 3807 0.89 - - - - - - - - - 0.890 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
70. TRIM3 ENSGALG00000034004 110 0.889 - - - - - - - - - 0.889 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
71. ENSGALG00000001919 ENSGALG00000001919 531 0.888 - - - - - - - - - 0.888
72. IMPA2 ENSGALG00000013814 4202 0.888 - - - - - - - - - 0.888 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
73. PRICKLE1 ENSGALG00000009556 60 0.888 - - - - - - - - - 0.888 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
74. ENSGALG00000024104 ENSGALG00000024104 1051 0.887 - - - - - - - - - 0.887
75. FN3K ENSGALG00000001531 208 0.887 - - - - - - - - - 0.887 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
76. USP14 ENSGALG00000014920 18778 0.886 - - - - - - - - - 0.886 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
77. ENSGALG00000004643 ENSGALG00000004643 2297 0.885 - - - - - - - - - 0.885
78. RASSF8 ENSGALG00000014041 850 0.885 - - - - - - - - - 0.885 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
79. PRR11 2624 0.884 - - - - - - - - - 0.884 proline rich 11, transcript variant X8
80. TRIM24 ENSGALG00000012823 2725 0.883 - - - - - - - - - 0.883 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
81. TNFRSF1A ENSGALG00000039461 1569 0.883 - - - - - - - - - 0.883 TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
82. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.883 - - - - - - - - - 0.883 family with sequence similarity 83, member D
83. TRMT44 ENSGALG00000015594 1490 0.883 - - - - - - - - - 0.883 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
84. ANKRA2 ENSGALG00000013511 3460 0.883 - - - - - - - - - 0.883 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
85. BZFP1 ENSGALG00000027546 632 0.882 - - - - - - - - - 0.882 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
86. MYCL ENSGALG00000024047 10367 0.882 - - - - - - - - - 0.882 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
87. CEP55 ENSGALG00000006639 258 0.879 - - - - - - - - - 0.879 centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]
88. TMEM199 ENSGALG00000023757 10781 0.879 - - - - - - - - - 0.879 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
89. DUSP23 1663 0.879 - - - - - - - - - 0.879 dual specificity phosphatase 23, transcript variant X1
90. C15H12ORF49 C15H12ORF49 13250 0.877 - - - - - - - - - 0.877
91. EP3 EP3 741 0.877 - - - - - - - - - 0.877
92. ARHGAP11A ENSGALG00000009731 6817 0.877 - - - - - - - - - 0.877 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
93. SNN ENSGALG00000028876 1687 0.876 - - - - - - - - - 0.876 stannin [Source:NCBI gene;Acc:416429]
94. ELL2 ENSGALG00000014678 1111 0.876 - - - - - - - - - 0.876 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
95. CMIP ENSGALG00000038494 5016 0.874 - - - - - - - - - 0.874 c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
96. TTC3 ENSGALG00000016050 4115 0.873 - - - - - - - - - 0.873 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
97. PLXNA4 ENSGALG00000006473 125 0.871 - - - - - - - - - 0.871 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
98. MITF ENSGALG00000039583 865 0.87 - - - - - - - - - 0.870 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
99. PDCD4 ENSGALG00000008700 574 0.87 - - - - - - - - - 0.870 programmed cell death 4 [Source:NCBI gene;Acc:374191]
100. DLX5 ENSGALG00000009129 1395 0.869 - - - - - - - - - 0.869 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]

There are 432 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA