Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM6A

Gene Name Gene ID Reads Annotation
KDM6A ENSGALG00000016217 2302 lysine demethylase 6A, transcript variant X14











Genes with expression patterns similar to KDM6A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM6A ENSGALG00000016217 2302 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine demethylase 6A, transcript variant X14
2. YBX3 ENSGALG00000031890 819 1.756 - - 0.925 - - - - - - 0.831 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
3. SNN ENSGALG00000028876 1687 1.736 - - 0.908 - - - - - - 0.828 stannin [Source:NCBI gene;Acc:416429]
4. SESN1 ENSGALG00000015286 2387 1.71 - - 0.896 - - - - - - 0.814 sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
5. ACOX1 ENSGALG00000002159 2953 1.709 - - 0.868 - - - - - - 0.841 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
6. DNAJC24 ENSGALG00000012130 1882 1.708 - - 0.895 - - - - - - 0.813 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
7. CEPT1 ENSGALG00000000142 4219 1.67 - - 0.854 - - - - - - 0.816 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
8. F F 3639 1.663 - - - - - - - 0.756 - 0.907
9. SBNO1 ENSGALG00000003392 6731 1.659 - - 0.804 - - - - - - 0.855 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
10. ATF7IP ENSGALG00000011814 1571 1.643 - - 0.929 - - - - - - 0.714 activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
11. WWC1 ENSGALG00000001826 4666 1.642 - - - - - - - 0.739 - 0.903 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
12. MIB1 ENSGALG00000014974 3583 1.637 - - 0.935 - - - - - - 0.702 mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
13. NUBP1 ENSGALG00000007241 3791 1.636 - - 0.895 - - - - 0.741 - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
14. BORA ENSGALG00000016931 3660 1.627 - - 0.883 - - - - 0.744 - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
15. SHMT1 ENSGALG00000005046 1430 1.624 - - 0.873 - - - - 0.751 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
16. NDC1 ENSGALG00000031606 3094 1.621 - - 0.908 - - - - 0.713 - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
17. STAU1 ENSGALG00000004736 3828 1.621 - - 0.825 - - - - - - 0.796 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
18. FAR-1 FAR-1 1855 1.611 - - 0.892 - - - - 0.719 - -
19. MAEA ENSGALG00000013310 13230 1.606 - - 0.828 - - - - 0.778 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
20. MRPS5 ENSGALG00000008550 1707 1.605 - - 0.772 - - - - - - 0.833 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
21. PEMT ENSGALG00000004875 4094 1.6 - - 0.895 - - - - 0.705 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
22. DHFR ENSGALG00000026757 18478 1.589 - - 0.835 - - - - - - 0.754 dihydrofolate reductase [Source:NCBI gene;Acc:427317]
23. JOSD1 ENSGALG00000041766 1445 1.578 - - - - - - - 0.706 - 0.872 Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
24. NUPL1 NUPL1 8197 1.574 - - 0.832 - - - 0.742 - - -
25. FOXK2 ENSGALG00000001577 6346 1.572 - - 0.860 - - - - - 0.712 - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
26. ING3 ENSGALG00000009023 4961 1.571 - - 0.825 - - - - 0.746 - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
27. RNF214 ENSGALG00000036993 3729 1.569 - - 0.868 - - - - - - 0.701 ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
28. LGALS1 ENSGALG00000012420 13993 1.563 - - 0.834 - - - 0.729 - - - galectin 1 [Source:NCBI gene;Acc:396491]
29. SLC12A4 ENSGALG00000034179 5674 1.56 - - 0.860 - - - - 0.700 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
30. SLC15A4 ENSGALG00000002695 2729 1.56 - - - - - - - 0.788 - 0.772 solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
31. SPCS1 ENSGALG00000001655 7718 1.559 - - 0.802 - - - - 0.757 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
32. HINT3 ENSGALG00000044342 5674 1.547 - - 0.845 - - - - 0.702 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
33. TIMMDC1 ENSGALG00000024480 9337 1.546 - - 0.831 - - - - 0.715 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
34. LBH ENSGALG00000009052 5545 1.542 - - 0.768 - - - - 0.774 - - limb bud and heart development [Source:NCBI gene;Acc:421301]
35. CDC45 ENSGALG00000001616 8432 1.524 - - 0.811 - - - 0.713 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
36. TOR1AIP1 ENSGALG00000029238 5843 1.521 - - - - - - 0.720 - - 0.801 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
37. WSB2 ENSGALG00000008151 13246 1.519 - - 0.783 - - - - - - 0.736 WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
38. CSTF3 ENSGALG00000011685 4711 1.516 - - 0.809 - - - - - - 0.707 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
39. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.515 - - 0.779 - - - - 0.736 - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
40. CDC2L1 CDC2L1 894 1.51 - - - - - - - - 0.717 0.793
41. ELMOD1 ENSGALG00000017169 2303 1.503 - - 0.770 - - - - 0.733 - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
42. CHORDC1 ENSGALG00000035461 2439 1.498 - - 0.778 - - - - - - 0.720 cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
43. CEP70 ENSGALG00000012087 7992 1.495 - - - - - - - 0.714 - 0.781 centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
44. MORN4 ENSGALG00000006149 7772 1.488 - - - - - - - 0.707 - 0.781 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
45. MRPL15 ENSGALG00000041086 16820 1.487 - - - - - - 0.722 - - 0.765 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
46. WDR3 ENSGALG00000014791 5856 1.485 - - 0.776 - - - - 0.709 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
47. THAP5 ENSGALG00000009494 6540 1.485 - - 0.784 - - - 0.701 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
48. DHX30 ENSGALG00000039830 5187 1.479 - - - - - - 0.732 0.747 - - DExH-box helicase 30 [Source:NCBI gene;Acc:420376]
49. SIRT6 ENSGALG00000001245 3716 1.461 - - - - - - 0.724 - - 0.737 sirtuin 6 [Source:NCBI gene;Acc:428332]
50. YIPF6 ENSGALG00000035973 3333 1.454 - - - - - - - 0.739 - 0.715 Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
51. RSRC1 ENSGALG00000009669 5829 1.453 - - 0.751 - - - - 0.702 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
52. CAST ENSGALG00000014682 900 1.45 - - - - - - - - 0.747 0.703 calpastatin [Source:NCBI gene;Acc:427121]
53. COMMD4 ENSGALG00000001572 31664 1.449 - - - - - - 0.739 - - 0.710 COMM domain containing 4 [Source:NCBI gene;Acc:770048]
54. SUMO2 ENSGALG00000007971 46283 1.446 - - 0.715 - - - - - - 0.731 small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
55. FAM98B ENSGALG00000009744 3435 1.443 - - - - - - 0.728 0.715 - - family with sequence similarity 98 member B [Source:HGNC Symbol;Acc:HGNC:26773]
56. ENSGALG00000020510 ENSGALG00000020510 4037 1.44 - - - - - - 0.725 0.715 - -
57. TPP2 ENSGALG00000016865 7509 1.438 - - 0.711 - - - - - - 0.727 tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
58. DDX59 ENSGALG00000002164 3314 1.432 - - - - - - 0.716 0.716 - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]
59. CASP6 ENSGALG00000012186 6639 1.429 - - - - - - - 0.719 - 0.710 caspase 6 [Source:NCBI gene;Acc:395477]
60. GPC1 ENSGALG00000040316 13364 1.419 - - 0.716 - - - - 0.703 - - glypican 1 [Source:NCBI gene;Acc:424770]
61. BBX ENSGALG00000015353 1281 0.955 - - 0.955 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
62. ABCE1 ENSGALG00000009961 958 0.951 - - 0.951 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
63. TRIM13 ENSGALG00000017011 92 0.947 - - 0.947 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
64. SMOC2 ENSGALG00000011205 340 0.947 - - 0.947 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
65. SZT2 ENSGALG00000028561 255 0.947 - - 0.947 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
66. BBS5 ENSGALG00000009846 344 0.947 - - 0.947 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
67. ADK ENSGALG00000005057 199 0.947 - - 0.947 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
68. GGT7 ENSGALG00000001062 476 0.947 - - 0.947 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
69. PCYT1B 190 0.947 - - 0.947 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
70. SLC3A1 ENSGALG00000009973 608 0.946 - - 0.946 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
71. RAD54L2 ENSGALG00000003243 187 0.945 - - 0.945 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
72. NXPE3 ENSGALG00000015344 111 0.945 - - 0.945 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
73. TTPAL ENSGALG00000004244 2734 0.945 - - 0.945 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
74. TCTN2 ENSGALG00000023683 3596 0.944 - - 0.944 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
75. ABCC3 ENSGALG00000007522 340 0.944 - - 0.944 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
76. UEVLD ENSGALG00000006342 164 0.944 - - 0.944 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
77. ENSGALG00000020103 ENSGALG00000020103 64 0.944 - - 0.944 - - - - - - -
78. CLEC16A ENSGALG00000007167 66 0.944 - - 0.944 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
79. ITGB4 ENSGALG00000002389 44 0.943 - - 0.943 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
80. PRUNE PRUNE 452 0.943 - - 0.943 - - - - - - -
81. TDRD6 48 0.943 - - 0.943 - - - - - - - tudor domain containing 6
82. U4 U4 69 0.943 - - 0.943 - - - - - - -
83. ENSGALG00000028964 ENSGALG00000028964 46 0.943 - - 0.943 - - - - - - -
84. CDC14B ENSGALG00000012627 110 0.943 - - 0.943 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
85. RECQL ENSGALG00000013174 1323 0.943 - - 0.943 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
86. MRC2 ENSGALG00000000461 48 0.943 - - 0.943 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
87. LRRC42 ENSGALG00000010743 384 0.943 - - 0.943 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
88. FBXL5 ENSGALG00000014510 245 0.942 - - 0.942 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
89. OSGIN2 ENSGALG00000042840 83 0.942 - - 0.942 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
90. AKAP10 ENSGALG00000004679 103 0.942 - - 0.942 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
91. TUBA4A ENSGALG00000000433 1367 0.941 - - 0.941 - - - - - - - tubulin alpha 4a
92. ITM2B ENSGALG00000016996 1112 0.941 - - 0.941 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
93. RQCD1 RQCD1 110 0.941 - - 0.941 - - - - - - -
94. RFK ENSGALG00000033558 1364 0.941 - - 0.941 - - - - - - - riboflavin kinase, transcript variant X3
95. GTF2H2 ENSGALG00000002399 2361 0.94 - - 0.940 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
96. SMARCAD1 ENSGALG00000037339 149 0.94 - - 0.940 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
97. L3MBTL3 ENSGALG00000034030 113 0.94 - - 0.940 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
98. PTDSS2 ENSGALG00000004300 682 0.94 - - 0.940 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
99. FAM134C 860 0.939 - - 0.939 - - - - - - - family with sequence similarity 134 member C
100. IFT81 ENSGALG00000003854 2534 0.939 - - 0.939 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]

There are 1004 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA