Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM5A

Gene Name Gene ID Reads Annotation
KDM5A ENSGALG00000012986 624 lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]











Genes with expression patterns similar to KDM5A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM5A ENSGALG00000012986 624 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
2. TP53I3 ENSGALG00000016502 178 1.662 - - - - - - 0.908 0.754 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
3. PRKCE ENSGALG00000010000 99 1.634 - - - - - - 0.915 0.719 - - protein kinase C epsilon, transcript variant X1
4. RIPK4 ENSGALG00000040189 102 1.614 - - - - - - 0.795 0.819 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
5. HKDC1 ENSGALG00000021039 134 1.411 - - 0.703 - - - - - 0.708 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
6. DSC1 ENSGALG00000015140 16 0.984 - - - - - - - 0.984 - - desmocollin 1, transcript variant X1
7. NKD1 ENSGALG00000003767 76 0.932 - - - - - - 0.932 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
8. LAMP1 ENSGALG00000037697 247 0.923 - - - - - - 0.923 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
9. C18H17ORF67 ENSGALG00000024428 10 0.92 - - - - - - 0.920 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
10. ANO3 ENSGALG00000013311 16 0.92 - - - - - - 0.920 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
11. TEX2 ENSGALG00000003496 23 0.92 - - - - - - 0.920 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
12. DCBLD1 ENSGALG00000014907 19 0.92 - - - - - - 0.920 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
13. MUC5B MUC5B 62 0.92 - - - - - - 0.920 - - -
14. ENSGALG00000023475 ENSGALG00000023475 19 0.92 - - - - - - 0.920 - - -
15. POFUT1 ENSGALG00000006594 367 0.917 - - - - - - 0.917 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
16. NAPRT1 NAPRT1 227 0.916 - - - - - - 0.916 - - -
17. ENDOV 121 0.916 - - - - - - 0.916 - - - endonuclease V
18. KYNU ENSGALG00000012418 353 0.914 - - - - - - 0.914 - - - kynureninase, transcript variant X3
19. VTI1B ENSGALG00000009526 133 0.91 - - - - - - 0.910 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
20. SVOPL ENSGALG00000012812 27 0.909 - - - - - - 0.909 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
21. MOCOS ENSGALG00000013149 25 0.908 - - - - - - 0.908 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
22. NXPH2 ENSGALG00000029083 353 0.9 - - - - - - - 0.900 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
23. RIPPLY2 ENSGALG00000015845 34 0.898 - - - - - - 0.898 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
24. ENSGALG00000029120 ENSGALG00000029120 73 0.898 - - - - - - 0.898 - - -
25. C9orf171 C9orf171 35 0.897 - - - - - - 0.897 - - -
26. TSPAN14 ENSGALG00000002414 69 0.896 - - - - - - 0.896 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
27. NCOA6 ENSGALG00000001182 83 0.893 - - - - - - 0.893 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
28. KCTD5 ENSGALG00000006423 192 0.891 - - - - - - 0.891 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
29. ENSGALG00000019522 ENSGALG00000019522 122 0.89 - - - - - - - 0.890 - -
30. TDRD5 ENSGALG00000033634 40 0.889 - - - - - - 0.889 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
31. SMYD1 ENSGALG00000015935 75 0.886 - - - - - - - 0.886 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
32. TSC2 ENSGALG00000005646 489 0.886 - - - - - - 0.886 - - - TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
33. PCGF2 ENSGALG00000018815 38 0.885 - - - - - - 0.885 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
34. ATP6V1AL ENSGALG00000000048 21 0.883 - - - - - - 0.883 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
35. MAP3K1 ENSGALG00000014718 60 0.883 - - - - - - 0.883 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
36. YTHDC1 ENSGALG00000035906 471 0.879 - - - - - - 0.879 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
37. MMR1L4 ENSGALG00000028304 81 0.878 - - - - - - 0.878 - - - Gallus gallus macrophage mannose receptor 1-like 4 (MMR1L4), mRNA. [Source:RefSeq mRNA;Acc:NM_001319013]
38. KRT222 ENSGALG00000003859 53 0.878 - - - - - - 0.878 - - - keratin 222 [Source:NCBI gene;Acc:420046]
39. FAM82B FAM82B 374 0.876 - - - - - - 0.876 - - -
40. C1QTNF6 ENSGALG00000027067 493 0.876 - - - - - - - 0.876 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
41. ENSGALG00000012463 ENSGALG00000012463 242 0.874 - - - - - - 0.874 - - -
42. FAM219A ENSGALG00000005821 52 0.873 - - - - - - - 0.873 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
43. RAB8B ENSGALG00000003487 295 0.871 - - - - - - 0.871 - - - RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]
44. MLF1 ENSGALG00000009654 619 0.869 - - - - - - 0.869 - - - myeloid leukemia factor 1, transcript variant X3
45. FBXL18 ENSGALG00000004611 97 0.868 - - - - - - 0.868 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
46. SNORD2 SNORD2 51 0.868 - - - - - - 0.868 - - -
47. PPM1F ENSGALG00000039121 26 0.867 - - - - - - - 0.867 - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
48. HTR2C ENSGALG00000005853 90 0.866 - - - - - - 0.866 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
49. CPNE7 ENSGALG00000000507 54 0.866 - - - - - - 0.866 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
50. TSPAN4 ENSGALG00000006837 150 0.865 - - - - - - 0.865 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
51. FAM21A FAM21A 251 0.864 - - - - - - 0.864 - - -
52. PDE4D ENSGALG00000014727 53 0.864 - - - - - - 0.864 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
53. LRRC2 ENSGALG00000013634 69 0.863 - - - - - - 0.863 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
54. AGL ENSGALG00000005407 93 0.858 - - - - - - 0.858 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
55. KCTD3 ENSGALG00000009678 335 0.857 - - - - - - 0.857 - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
56. ENSGALG00000001515 ENSGALG00000001515 833 0.856 - - - - - - 0.856 - - -
57. LOC770996 ENSGALG00000016570 635 0.856 - - - - - - 0.856 - - - L-gulonolactone oxidase-like
58. TRAM2 ENSGALG00000016673 438 0.855 - - - - - - 0.855 - - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
59. FGB ENSGALG00000009262 1169 0.855 - - - - - - 0.855 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
60. ARHGAP15 ENSGALG00000012421 58 0.855 - - - - - - 0.855 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
61. GRIA2 ENSGALG00000009405 275 0.854 - - - - - - 0.854 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
62. IFT27 ENSGALG00000042990 221 0.853 - - - - - - 0.853 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
63. LMCD1 ENSGALG00000008349 928 0.853 - - - - - - 0.853 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
64. ENSGALG00000014900 ENSGALG00000014900 335 0.852 - - - - - - 0.852 - - -
65. ZDHHC5 ENSGALG00000007362 296 0.85 - - - - - - 0.850 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
66. ENSGALG00000020753 ENSGALG00000020753 159 0.848 - - - - - - 0.848 - - -
67. PLCXD1 ENSGALG00000016721 289 0.847 - - - - - - 0.847 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
68. CPNE1 ENSGALG00000040856 610 0.847 - - - - - - 0.847 - - - copine 1 [Source:NCBI gene;Acc:419134]
69. DNAI2 ENSGALG00000004495 45 0.845 - - - - - - - 0.845 - - dynein axonemal intermediate chain 2
70. APBA2 ENSGALG00000003930 408 0.845 - - - - - - 0.845 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
71. HOXCDX1L ENSGALG00000007656 53 0.845 - - - - - - 0.845 - - - homeobox protein CDX-1-like
72. TMCO4 ENSGALG00000004081 31 0.844 - - - - - - - 0.844 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
73. FBXW4 ENSGALG00000043428 300 0.843 - - - - - - 0.843 - - - F-box and WD repeat domain containing 4 [Source:HGNC Symbol;Acc:HGNC:10847]
74. RSFR 61 0.843 - - - - - - 0.843 - - - leukocyte ribonuclease A-2
75. HAUS8 ENSGALG00000003727 351 0.842 - - - - - - 0.842 - - - HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
76. GHDC ENSGALG00000003333 178 0.841 - - - - - - 0.841 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
77. LOC100857820 ENSGALG00000001824 16 0.841 - - - - - - 0.841 - - - uncharacterized LOC100857820
78. NSUN5 ENSGALG00000000891 1356 0.841 - - - - - - 0.841 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
79. PHTF2 ENSGALG00000008335 722 0.84 - - - - - - 0.840 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
80. PCP4 ENSGALG00000022819 880 0.84 - - - - - - 0.840 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
81. STAB1 21 0.84 - - - - - - - 0.840 - - stabilin 1, transcript variant X2
82. TC2N ENSGALG00000010738 92 0.84 - - - - - - 0.840 - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
83. ENSGALG00000019053 ENSGALG00000019053 8 0.84 - - - - - - - 0.840 - -
84. PLB1 PLB1 101 0.84 - - - - - - - 0.840 - -
85. FOXP4 ENSGALG00000033497 13 0.84 - - - - - - - 0.840 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
86. CCDC96 9 0.84 - - - - - - - 0.840 - - coiled-coil domain containing 96
87. APOAIV APOAIV 5 0.84 - - - - - - - 0.840 - -
88. GINS3 ENSGALG00000031209 32 0.84 - - - - - - - 0.840 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
89. RAB2A ENSGALG00000015450 990 0.839 - - - - - - 0.839 - - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
90. USP53 ENSGALG00000011990 12 0.839 - - - - - - - 0.839 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
91. SDR42E2 ENSGALG00000006964 57 0.839 - - - - - - - 0.839 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
92. GFAP ENSGALG00000000909 21 0.838 - - - - - - - 0.838 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
93. ENPP3 ENSGALG00000037587 25 0.836 - - - - - - - 0.836 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
94. KRT20 ENSGALG00000019716 11 0.836 - - - - - - - 0.836 - - keratin 20 [Source:NCBI gene;Acc:420045]
95. EPB41L4A ENSGALG00000000234 113 0.835 - - - - - - - 0.835 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
96. LRRC42 ENSGALG00000010743 384 0.835 - - - - - - 0.835 - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
97. CD4 ENSGALG00000014477 19 0.835 - - - - - - - 0.835 - - CD4 molecule [Source:NCBI gene;Acc:395362]
98. ELK4 ENSGALG00000042137 69 0.835 - - - - - - 0.835 - - - ELK4, ETS transcription factor
99. ICOS ENSGALG00000008656 27 0.835 - - - - - - - 0.835 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
100. ANKS1B ENSGALG00000011549 440 0.835 - - - - - - 0.835 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA