Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for KDM1B

Gene Name Gene ID Reads Annotation
KDM1B ENSGALG00000012685 11 lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]











Genes with expression patterns similar to KDM1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM1B ENSGALG00000012685 11 4 - - 1.000 1.000 - 1.000 - - - 1.000 lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
2. TMEM156 ENSGALG00000024490 9 1.928 - - 0.928 - - - - - - 1.000 transmembrane protein 156, transcript variant X5
3. ENSGALG00000002444 ENSGALG00000002444 4 1.879 - - 1.000 - - 0.879 - - - -
4. B2M ENSGALG00000002160 4 1.748 - - 0.748 - - - - - - 1.000 beta-2-microglobulin [Source:NCBI gene;Acc:414830]
5. CD200L ENSGALG00000015395 14 1.717 - - 0.765 - - - - - - 0.952 CD200 molecule-like [Source:NCBI gene;Acc:418424]
6. NOL4 ENSGALG00000015198 1 1 - - 1.000 - - - - - - - nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]
7. RPS6KA2 ENSGALG00000011473 2 1 - - 1.000 - - - - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
8. ITGB6 ENSGALG00000011141 2 1 - - 1.000 - - - - - - - integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]
9. SH3PXD2B ENSGALG00000002831 7 1 - - 1.000 - - - - - - - SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]
10. CXorf21 ENSGALG00000016286 4 1 - - - - - - - - - 1.000 chromosome X open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:25667]
11. LPHN3 LPHN3 41 1 - - - - - 1.000 - - - -
12. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - - - 1.000 solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
13. DLGAP1 ENSGALG00000014793 1 1 - - 1.000 - - - - - - - DLG associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2905]
14. SS18L1 ENSGALG00000005145 14 1 - - - - - - - - - 1.000 SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
15. MREG ENSGALG00000003758 3 1 - - - - - - - - - 1.000 melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
16. GAL11 GAL11 0 1 - - - - - - - - - 1.000
17. ENSGALG00000021836 ENSGALG00000021836 1 1 - - 1.000 - - - - - - -
18. SLC28A3 ENSGALG00000012593 131 1 - - 1.000 - - - - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
19. C21orf62 ENSGALG00000040059 5 1 - - - - - - - - - 1.000 chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
20. AVD ENSGALG00000023622 22 1 - - - - - - - - - 1.000 avidin [Source:NCBI gene;Acc:396260]
21. SLC15A2 ENSGALG00000011671 1 1 - - 1.000 - - - - - - - Gallus gallus solute carrier family 15 member 2 (SLC15A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319028]
22. LTC4S ENSGALG00000021275 1 1 - - 1.000 - - - - - - - leukotriene C4 synthase [Source:HGNC Symbol;Acc:HGNC:6719]
23. CNTN6 ENSGALG00000007927 1 1 - - 1.000 - - - - - - - contactin 6 [Source:HGNC Symbol;Acc:HGNC:2176]
24. TLR7 ENSGALG00000016590 6 1 - - 1.000 - - - - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
25. KCNH7 ENSGALG00000038543 20 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily H member 7 [Source:HGNC Symbol;Acc:HGNC:18863]
26. FTCD ENSGALG00000006131 0 1 - - - - - - - - - 1.000 formimidoyltransferase cyclodeaminase [Source:NCBI gene;Acc:395726]
27. ENSGALG00000014888 ENSGALG00000014888 3 1 - - 1.000 - - - - - - -
28. NOXO1 ENSGALG00000005572 14 1 - - 1.000 - - - - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
29. CCDC122 ENSGALG00000016968 5 1 - - - - - - - - - 1.000 coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
30. ANKRD34B ENSGALG00000044727 9 1 - - 1.000 - - - - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
31. TLL2 ENSGALG00000005519 10 1 - - - - - - - - - 1.000 tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
32. LOC427545 ENSGALG00000004428 3 1 - - - - - - - - - 1.000 histamine H3 receptor-like
33. RUNDC3A ENSGALG00000026518 2 1 - - - - - - - - - 1.000 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
34. PRKD3 ENSGALG00000010612 2 1 - - - - - 1.000 - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
35. APELA ENSGALG00000023444 3 1 - - - - - 1.000 - - - - apelin receptor early endogenous ligand [Source:NCBI gene;Acc:770154]
36. SLC44A3 ENSGALG00000005610 18 1 - - - - - - - - - 1.000 solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
37. PDE11A ENSGALG00000042374 1 1 - - 1.000 - - - - - - - phosphodiesterase 11A
38. TNNI3K ENSGALG00000011353 10 1 - - - - - - - - - 1.000 TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
39. SLC16A3 ENSGALG00000002728 323 1 - - 1.000 - - - - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
40. ENSGALG00000012217 ENSGALG00000012217 8 1 - - - - - - - - - 1.000
41. LDB1 ENSGALG00000007641 2 1 - - 1.000 - - - - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
42. C9orf152 C9orf152 3 1 - - 1.000 - - - - - - -
43. ENSGALG00000012382 ENSGALG00000012382 10 1 - - 1.000 - - - - - - -
44. ENSGALG00000024292 ENSGALG00000024292 2 1 - - 1.000 - - - - - - -
45. ANKRD42 8 1 - - - - - - - - - 1.000 ankyrin repeat domain 42
46. ZDHHC1 ENSGALG00000002091 3 1 - - - - - - - - - 1.000 zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
47. WFDC2 ENSGALG00000031164 37 1 - - - - - - - - - 1.000 WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
48. ACER2 ENSGALG00000015081 18 1 - - - - - 1.000 - - - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
49. ERGIC3 ENSGALG00000027834 0 1 - - - - - - - - - 1.000 ERGIC and golgi 3 [Source:HGNC Symbol;Acc:HGNC:15927]
50. ENSGALG00000026267 ENSGALG00000026267 1 1 - - - - - 1.000 - - - -
51. IL23R IL23R 25 1 - - - - - 1.000 - - - -
52. ALDH8A1 ENSGALG00000013969 8 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
53. ENSGALG00000010376 ENSGALG00000010376 1 1 - - 1.000 - - - - - - -
54. ENSGALG00000020676 ENSGALG00000020676 2 1 - - 1.000 - - - - - - -
55. VCAM1 ENSGALG00000005257 102 1 - - - - - 1.000 - - - - vascular cell adhesion molecule 1, transcript variant X1
56. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - - - 1.000 cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
57. IL17REL ENSGALG00000008554 5 1 - - 1.000 - - - - - - - interleukin 17 receptor E like [Source:HGNC Symbol;Acc:HGNC:33808]
58. QRSL1 ENSGALG00000015338 16 1 - - - - - 1.000 - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
59. SESN2 ENSGALG00000005648, ENSGALG00000037603 0 1 - - - - - - - - - 1.000 sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
60. gga-mir-133a-2 ENSGALG00000018293 1 1 - - 1.000 - - - - - - - gga-mir-133a-2 [Source:miRBase;Acc:MI0001248]
61. LECT2 ENSGALG00000006323 60 1 - - - - - - - - - 1.000 leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
62. SLC6A9 ENSGALG00000010098 5 1 - - - - - 1.000 - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
63. RHBDF2 ENSGALG00000001943 1 1 - - - - - - - - - 1.000 rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
64. CASP18 ENSGALG00000008346 23 1 - - 1.000 - - - - - - - initiator caspase [Source:NCBI gene;Acc:693266]
65. SCARNA14 SCARNA14 1 1 - - 1.000 - - - - - - -
66. HTR2A ENSGALG00000016992 73 1 - - - - - 1.000 - - - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
67. POMGNT1 ENSGALG00000010351 3 1 - - 1.000 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
68. UST ENSGALG00000012345 7 1 - - 1.000 - - - - - - - uronyl 2-sulfotransferase [Source:HGNC Symbol;Acc:HGNC:17223]
69. C12orf50 ENSGALG00000045093 9 1 - - 1.000 - - - - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
70. SK2 SK2 74 1 - - - - - 1.000 - - - -
71. RIT2 ENSGALG00000033353 3 1 - - 1.000 - - - - - - - Ras like without CAAX 2 [Source:HGNC Symbol;Acc:HGNC:10017]
72. TMEM204 ENSGALG00000029047 8 1 - - - - - 1.000 - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
73. PAPOLG ENSGALG00000007853 1 1 - - 1.000 - - - - - - - poly(A) polymerase gamma [Source:HGNC Symbol;Acc:HGNC:14982]
74. LOXL4 ENSGALG00000013090 9 1 - - - - - - - - - 1.000 lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
75. ENSGALG00000003611 ENSGALG00000003611 22 1 - - 1.000 - - - - - - -
76. RBM46 ENSGALG00000009278 98 1 - - 1.000 - - - - - - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
77. SLC22A7 ENSGALG00000001661 9 1 - - 1.000 - - - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
78. VEPH1 ENSGALG00000009682 51 1 - - - - - 1.000 - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
79. ENTPD1 ENSGALG00000007078 5 1 - - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:NCBI gene;Acc:423826]
80. ENSGALG00000026342 ENSGALG00000026342 1 1 - - 1.000 - - - - - - -
81. C8orf37 ENSGALG00000038971 5 1 - - - - - - - - - 1.000 chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
82. ENSGALG00000015905 ENSGALG00000015905 5 1 - - 1.000 - - - - - - -
83. ODF2L ENSGALG00000006804 10 1 - - - - - 1.000 - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
84. ENSGALG00000026922 ENSGALG00000026922 3 1 - - - - - 1.000 - - - -
85. ENSGALG00000010657 ENSGALG00000010657 1 1 - - 1.000 - - - - - - -
86. PACSIN1 ENSGALG00000002802 6 1 - - - - - - - - - 1.000 protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
87. CSF2RA ENSGALG00000016693 5 1 - - 1.000 - - - - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
88. MLNR ENSGALG00000017003 10 1 - - - - - - - - - 1.000 motilin receptor [Source:NCBI gene;Acc:428072]
89. ENSGALG00000023702 ENSGALG00000023702 2 1 - - - - - - - - - 1.000
90. PPAP2C PPAP2C 1 1 - - - - - - - - - 1.000
91. GATA4 ENSGALG00000016662 6 1 - - - - - - - - - 1.000 GATA binding protein 4 [Source:NCBI gene;Acc:396392]
92. GPA33 ENSGALG00000044138 1 1 - - 1.000 - - - - - - - glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]
93. TINAGL1 ENSGALG00000017715 3 1 - - - - - - - - - 1.000 tubulointerstitial nephritis antigen like 1 [Source:HGNC Symbol;Acc:HGNC:19168]
94. ENSGALG00000002074 ENSGALG00000002074 1 1 - - 1.000 - - - - - - -
95. ZNF606L ENSGALG00000024335 4 1 - - - - - - - - - 1.000 zinc finger protein 606-like, transcript variant X9
96. DLGAP2 ENSGALG00000032937 2 1 - - 1.000 - - - - - - - DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]
97. CDYL2 ENSGALG00000012978 6 1 - - - - - - - - - 1.000 chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
98. PGP ENSGALG00000005888 1 1 - - - - - - - - - 1.000 phosphoglycolate phosphatase [Source:NCBI gene;Acc:416559]
99. LMOD1 ENSGALG00000028721 81 1 - - - - - 1.000 - - - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
100. CCDC85C 2 1 - - - - - - - - - 1.000 coiled-coil domain containing 85C, transcript variant X1

There are 153 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA