Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HPS6

Gene Name Gene ID Reads Annotation
HPS6 ENSGALG00000020741 4 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]











Genes with expression patterns similar to HPS6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPS6 ENSGALG00000020741 4 3 - - 1.000 - - 1.000 - - - 1.000 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
2. ERN1 ENSGALG00000003476 4 1 - - - - - - - - - 1.000 endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
3. AK4 ENSGALG00000011035 9 1 - - - - - - - - - 1.000 adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
4. ENSGALG00000006278 ENSGALG00000006278 202 1 - - - - - - - - - 1.000
5. BRI3BP ENSGALG00000002913 3 1 - - - - - - - - - 1.000 BRI3 binding protein [Source:NCBI gene;Acc:416812]
6. CCDC96 9 1 - - - - - - - - - 1.000 coiled-coil domain containing 96
7. SHF ENSGALG00000038637 1 1 - - - - - - - - - 1.000 Src homology 2 domain containing F [Source:HGNC Symbol;Acc:HGNC:25116]
8. SYTL5 1 1 - - - - - - - - - 1.000 synaptotagmin like 5, transcript variant X2
9. CABLES2 ENSGALG00000005345 6 1 - - - - - - - - - 1.000 Cdk5 and Abl enzyme substrate 2 [Source:HGNC Symbol;Acc:HGNC:16143]
10. CALB1 ENSGALG00000032282 16 1 - - - - - - - - - 1.000 calbindin 1 [Source:NCBI gene;Acc:396519]
11. ENSGALG00000026580 ENSGALG00000026580 4 1 - - - - - - - - - 1.000
12. PAQR5 ENSGALG00000008077 1 1 - - - - - - - - - 1.000 progestin and adipoQ receptor family member 5 [Source:HGNC Symbol;Acc:HGNC:29645]
13. DEGS2 ENSGALG00000011213 1 1 - - - - - - - - - 1.000 delta 4-desaturase, sphingolipid 2 [Source:HGNC Symbol;Acc:HGNC:20113]
14. KLHDC10 ENSGALG00000008013 4 1 - - - - - - - - - 1.000 kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
15. CHRNG ENSGALG00000007906 19 1 - - - - - - - - - 1.000 cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
16. gga-mir-1587 ENSGALG00000025553 1 1 - - - - - - - - - 1.000 gga-mir-1587 [Source:miRBase;Acc:MI0007314]
17. VIT ENSGALG00000010583 16 1 - - - - - - - - - 1.000 vitrin [Source:NCBI gene;Acc:421471]
18. HINFP ENSGALG00000006806 15 1 - - - - - - - - - 1.000 histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
19. C8A ENSGALG00000010850 1 1 - - - - - - - - - 1.000 complement C8 alpha chain [Source:HGNC Symbol;Acc:HGNC:1352]
20. KEL ENSGALG00000014736 18 1 - - - - - - - - - 1.000 Kell blood group, metallo-endopeptidase, transcript variant X4
21. TINAG ENSGALG00000016300 5 1 - - - - - - - - - 1.000 tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
22. STK32A ENSGALG00000029195 27 1 - - - - - - - - - 1.000 serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
23. HCRTR2 ENSGALG00000016297 2 1 - - - - - - - - - 1.000 hypocretin receptor 2 [Source:NCBI gene;Acc:428644]
24. ENSGALG00000004223 ENSGALG00000004223 7 1 - - - - - - - - - 1.000
25. POLG ENSGALG00000006641, ENSGALG00000045136 2 1 - - - - - - - - - 1.000 DNA polymerase gamma, catalytic subunit, transcript variant X1
26. DAPK2 ENSGALG00000003336 3 1 - - - - - - - - - 1.000 death associated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:2675]
27. BARL ENSGALG00000002170 4 1 - - - - - - - - - 1.000 bile acid receptor-like, transcript variant X2
28. KRT14_1 ENSGALG00000003690 93 0.989 - - - - - - - - - 0.989 keratin 14 [Source:NCBI gene;Acc:408039]
29. CMC4 ENSGALG00000023937 15 0.962 - - - - - - - - - 0.962 C-X9-C motif containing 4 [Source:HGNC Symbol;Acc:HGNC:35428]
30. ENSGALG00000027170 ENSGALG00000027170 6 0.957 - - - - - 0.957 - - - -
31. CR1L ENSGALG00000023950 98 0.944 - - - - - 0.944 - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
32. ENSGALG00000019202 ENSGALG00000019202 9 0.93 - - 0.930 - - - - - - -
33. TMC3 ENSGALG00000006376 12 0.907 - - 0.907 - - - - - - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
34. TRAIL-LIKE ENSGALG00000007240 8 0.903 - - - - - 0.903 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
35. NKX2-5 ENSGALG00000002886 81 0.903 - - - - - 0.903 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
36. LDLRAD3 ENSGALG00000038913 4 0.903 - - - - - 0.903 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
37. CNGA3 ENSGALG00000039826 3 0.903 - - - - - 0.903 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
38. PTPN23 ENSGALG00000038522 93 0.903 - - - - - 0.903 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
39. gga-mir-6579-2 ENSGALG00000035346 7 0.903 - - - - - 0.903 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
40. GGT5 ENSGALG00000040504 24 0.903 - - - - - 0.903 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
41. SPTBN5 395 0.903 - - - - - 0.903 - - - - spectrin beta, non-erythrocytic 5
42. GPR114 GPR114 46 0.903 - - - - - 0.903 - - - -
43. FXYD2 ENSGALG00000007320 168 0.903 - - - - - 0.903 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
44. RBM47 ENSGALG00000014267 6 0.903 - - - - - 0.903 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
45. SLC30A1 ENSGALG00000009858 5 0.903 - - - - - 0.903 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
46. HAPLN4 ENSGALG00000026563 9 0.903 - - - - - 0.903 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
47. ENSGALG00000021375 ENSGALG00000021375 1 0.903 - - - - - 0.903 - - - -
48. Six3os1 Six3os1 1 0.903 - - - - - 0.903 - - - -
49. FIP1L1 ENSGALG00000013943 15 0.903 - - - - - 0.903 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
50. SYT15 ENSGALG00000002046 3 0.903 - - - - - 0.903 - - - - synaptotagmin 15, transcript variant X1
51. EDNRB2 ENSGALG00000007466 1 0.903 - - - - - 0.903 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
52. ENSGALG00000023027 ENSGALG00000023027 5 0.903 - - - - - 0.903 - - - -
53. TTC28 ENSGALG00000005676 36 0.903 - - - - - 0.903 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
54. ESAM ENSGALG00000032943 1 0.903 - - - - - 0.903 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
55. LFABP LFABP 5 0.903 - - - - - 0.903 - - - -
56. ENSGALG00000026341 ENSGALG00000026341 1 0.903 - - - - - 0.903 - - - -
57. ENSGALG00000020819 ENSGALG00000020819 2 0.903 - - - - - 0.903 - - - -
58. KLHL1 ENSGALG00000016907 21 0.903 - - - - - 0.903 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
59. RASSF6 ENSGALG00000011664 7 0.903 - - - - - 0.903 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
60. ENSGALG00000018528 ENSGALG00000018528 1 0.903 - - - - - 0.903 - - - -
61. IGSF9 ENSGALG00000031193 16 0.897 - - - - - 0.897 - - - - immunoglobulin superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:18132]
62. VCAM1 ENSGALG00000005257 102 0.89 - - 0.890 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
63. DOK4 ENSGALG00000001160 2 0.89 - - 0.890 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
64. TAPP2 TAPP2 2 0.89 - - 0.890 - - - - - - -
65. AGRP ENSGALG00000002244 27 0.89 - - 0.890 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
66. PABPC1L ENSGALG00000004123 2 0.89 - - 0.890 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
67. RHCG ENSGALG00000006635 7 0.89 - - 0.890 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
68. PDE1A ENSGALG00000008885 4 0.89 - - 0.890 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
69. MYRFL ENSGALG00000019352 2 0.89 - - 0.890 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
70. ENSGALG00000009969 ENSGALG00000009969 2 0.89 - - 0.890 - - - - - - -
71. CSF3R ENSGALG00000002112 2 0.89 - - 0.890 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
72. GABRG1 ENSGALG00000020143 5 0.89 - - 0.890 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
73. GIF ENSGALG00000031546 2 0.89 - - 0.890 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
74. SMG7 ENSGALG00000004667 707 0.886 - - - - - 0.886 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
75. EFCAB12 EFCAB12 15 0.885 - - - - - 0.885 - - - -
76. CMTR2 ENSGALG00000002356 3 0.882 - - - - - 0.882 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
77. RECQL5 ENSGALG00000002424 16 0.882 - - - - - 0.882 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
78. FAM160A1 ENSGALG00000010090 10 0.878 - - - - - - - - - 0.878 family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
79. BTLA ENSGALG00000015398 34 0.876 - - - - - - - - - 0.876 B and T lymphocyte associated, transcript variant X1
80. FZD1 ENSGALG00000009064 76 0.876 - - - - - 0.876 - - - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
81. UROC1 ENSGALG00000006306 75 0.874 - - - - - 0.874 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
82. MAGI1 ENSGALG00000007431 23 0.871 - - - - - - - - - 0.871 membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
83. RASGRP1 ENSGALG00000009740 15 0.867 - - - - - - - - - 0.867 RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
84. AMPD1 ENSGALG00000002082 228 0.865 - - - - - 0.865 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
85. LOC418544 ENSGALG00000019175 19 0.861 - - - - - 0.861 - - - - cystathionine beta-synthase-like
86. TNR ENSGALG00000004526 6 0.86 - - - - - 0.860 - - - - tenascin R [Source:NCBI gene;Acc:396213]
87. CLEC19A ENSGALG00000030546 8 0.86 - - - - - - - - - 0.860 C-type lectin domain containing 19A [Source:HGNC Symbol;Acc:HGNC:34522]
88. INSC ENSGALG00000032558 74 0.854 - - - - - 0.854 - - - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
89. RIBC2 ENSGALG00000014232 13 0.851 - - - - - 0.851 - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
90. MYO1D ENSGALG00000000674 14 0.851 - - - - - 0.851 - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
91. MBTPS2 ENSGALG00000016382 259 0.849 - - - - - 0.849 - - - - membrane bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:HGNC:15455]
92. CLDN10 ENSGALG00000019114 2 0.848 - - 0.848 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
93. MZB1 ENSGALG00000044427 6 0.846 - - 0.846 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
94. CD101 12 0.846 - - 0.846 - - - - - - - CD101 molecule, transcript variant X4
95. UPB1 ENSGALG00000006627 139 0.846 - - 0.846 - - - - - - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
96. NUDT5 ENSGALG00000013967 145 0.844 - - - - - - - - - 0.844 nudix hydrolase 5 [Source:NCBI gene;Acc:426368]
97. TNIP2 ENSGALG00000015666 28 0.844 - - - - - 0.844 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
98. PCDH12 ENSGALG00000002544 36 0.842 - - 0.842 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
99. LOC417741 ENSGALG00000008635 594 0.838 - - - - - - - - - 0.838 secreted frizzled-related protein 2-like
100. GTPBP6 ENSGALG00000016717 17 0.836 - - - - - 0.836 - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA