Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HPS4

Gene Name Gene ID Reads Annotation
HPS4 ENSGALG00000005595 2217 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]











Genes with expression patterns similar to HPS4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPS4 ENSGALG00000005595 2217 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
2. DCK ENSGALG00000028501 8675 1.868 - - - - - - - 0.993 - 0.875 deoxycytidine kinase [Source:NCBI gene;Acc:422648]
3. MRPL32 ENSGALG00000037258 6861 1.827 - - - - - - - 0.980 - 0.847 mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
4. SIRT6 ENSGALG00000001245 3716 1.798 - - - - - - - 0.991 - 0.807 sirtuin 6 [Source:NCBI gene;Acc:428332]
5. MCFD2 ENSGALG00000010017 8905 1.781 - - - - - - - 0.868 - 0.913 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
6. KIF1A ENSGALG00000006221 1989 1.746 - - - - - - - 0.982 - 0.764 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
7. DEPDC1B ENSGALG00000014729 5334 1.719 - - - - - - - 0.993 - 0.726 DEP domain containing 1B [Source:NCBI gene;Acc:427152]
8. RNF220 ENSGALG00000010109 3114 1.719 - - - - - - - 0.838 - 0.881 ring finger protein 220 [Source:NCBI gene;Acc:424580]
9. GRPEL1 ENSGALG00000015549 11246 1.714 - - - - - - - 0.920 - 0.794 GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
10. WDR33 ENSGALG00000002043 6340 1.659 - - - - - - - 0.783 - 0.876 WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
11. CTCF 10811 1.63 - - - - - - 0.702 - - 0.928 CCCTC-binding factor, transcript variant X2
12. GNPAT ENSGALG00000011163 4286 1.563 - - - - - - 0.708 - - 0.855 glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
13. NEO1 ENSGALG00000001774 10165 0.989 - - - - - - - 0.989 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
14. DIMT1 ENSGALG00000020569 5150 0.989 - - - - - - - 0.989 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
15. TMEM200C ENSGALG00000030210 1434 0.988 - - - - - - - 0.988 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
16. RAB20 ENSGALG00000016844 3250 0.988 - - - - - - - 0.988 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
17. MYO9A ENSGALG00000033618 4505 0.988 - - - - - - - 0.988 - - myosin IXA, transcript variant X10
18. PIGB ENSGALG00000037734 2193 0.987 - - - - - - - 0.987 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
19. ATP11B ENSGALG00000008839 3455 0.987 - - - - - - - 0.987 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
20. CNPY3 ENSGALG00000028471 1413 0.986 - - - - - - - 0.986 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
21. SFXN1 ENSGALG00000033956 2713 0.986 - - - - - - - 0.986 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
22. TEX10 ENSGALG00000013438 3121 0.986 - - - - - - - 0.986 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
23. AVENAII AVENAII 4552 0.986 - - - - - - - 0.986 - -
24. RAD52 ENSGALG00000039171 6989 0.985 - - - - - - - 0.985 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
25. PRDM6 ENSGALG00000005351 2078 0.985 - - - - - - - 0.985 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
26. BLCAP ENSGALG00000027126 12200 0.985 - - - - - - - 0.985 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
27. TMEM60 ENSGALG00000008330 6303 0.985 - - - - - - - 0.985 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
28. MIEN1 ENSGALG00000026328 3396 0.985 - - - - - - - 0.985 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
29. RAC2 ENSGALG00000012456 987 0.985 - - - - - - - 0.985 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
30. KCNK2 ENSGALG00000009687 1552 0.984 - - - - - - - 0.984 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
31. ZCCHC10 ENSGALG00000036666 5148 0.984 - - - - - - - 0.984 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
32. CCDC15 1759 0.984 - - - - - - - 0.984 - - coiled-coil domain containing 15
33. FSBP 3152 0.984 - - - - - - - 0.984 - - fibrinogen silencer binding protein
34. ADAMTS6 ENSGALG00000014751 1293 0.983 - - - - - - - 0.983 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
35. NKIRAS2 ENSGALG00000028971 3414 0.982 - - - - - - - 0.982 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
36. SPR ENSGALG00000000067 3456 0.982 - - - - - - - 0.982 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
37. TNNI1 ENSGALG00000000313 4069 0.982 - - - - - - - 0.982 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
38. EFR3B ENSGALG00000016605 234 0.982 - - - - - - - 0.982 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
39. MTFR2 ENSGALG00000019967 4436 0.982 - - - - - - - 0.982 - - mitochondrial fission regulator 2, transcript variant X1
40. CDKAL1 ENSGALG00000012677 4733 0.982 - - - - - - - 0.982 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
41. ARHGEF18 ENSGALG00000003572 224 0.981 - - - - - - - 0.981 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
42. SYNM ENSGALG00000007048 705 0.981 - - - - - - - 0.981 - - synemin [Source:NCBI gene;Acc:395599]
43. ACVR2B ENSGALG00000006158 8692 0.981 - - - - - - - 0.981 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
44. ENSGALG00000006278 ENSGALG00000006278 202 0.981 - - - - - - - 0.981 - -
45. DAB2 ENSGALG00000003803 6143 0.981 - - - - - - - 0.981 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
46. FAXDC2 ENSGALG00000003972 172 0.981 - - - - - - - 0.981 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
47. ENSGALG00000002852 ENSGALG00000002852 2687 0.98 - - - - - - - 0.980 - -
48. TMEM26 ENSGALG00000025862 2222 0.979 - - - - - - - 0.979 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
49. TTC37 ENSGALG00000014670 5715 0.978 - - - - - - - 0.978 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
50. SULF1 ENSGALG00000039553 5115 0.978 - - - - - - - 0.978 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
51. IVD ENSGALG00000040267 5820 0.978 - - - - - - - 0.978 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
52. COPS8 ENSGALG00000033385 10166 0.975 - - - - - - - 0.975 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
53. AP5Z1 ENSGALG00000040528 4302 0.97 - - - - - - - 0.970 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
54. CCDC104 CCDC104 6584 0.969 - - - - - - - 0.969 - -
55. GNL2 ENSGALG00000001973 10148 0.967 - - - - - - - 0.967 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
56. GATC ENSGALG00000007195 8610 0.964 - - - - - - - 0.964 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
57. BEND5 ENSGALG00000010505 3298 0.962 - - - - - - - 0.962 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
58. RGP1 ENSGALG00000002394 5937 0.961 - - - - - - - - - 0.961 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
59. NDUFB4 ENSGALG00000027688 8951 0.96 - - - - - - - 0.960 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
60. STX2 ENSGALG00000002536 10438 0.96 - - - - - - - 0.960 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
61. LRRC59 ENSGALG00000007673 2081 0.958 - - - - - - - 0.958 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
62. TNFRSF21 ENSGALG00000016719 2762 0.953 - - - - - - - - - 0.953 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
63. CCDC58 ENSGALG00000014413 9022 0.953 - - - - - - - 0.953 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
64. VAV2 ENSGALG00000002699 503 0.952 - - - - - - - - - 0.952 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
65. YIPF1 5945 0.949 - - - - - - - 0.949 - - Yip1 domain family member 1, transcript variant 4
66. ADAMTS12 55 0.949 - - - - - - - - - 0.949 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
67. NFKBIE ENSGALG00000044525 633 0.949 - - - - - - - - - 0.949 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
68. EVPL ENSGALG00000002108 591 0.948 - - - - - - - 0.948 - - envoplakin
69. PCMTD2 ENSGALG00000005901 1833 0.948 - - - - - - - - - 0.948 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
70. TTI1 ENSGALG00000006791 1218 0.948 - - - - - - - - - 0.948 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
71. MITF ENSGALG00000039583 865 0.947 - - - - - - - - - 0.947 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
72. MAGT1 ENSGALG00000007861 9105 0.947 - - - - - - - 0.947 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
73. MAP3K8 ENSGALG00000007356 188 0.947 - - - - - - - - - 0.947 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
74. PREP ENSGALG00000015405 17050 0.947 - - - - - - - 0.947 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
75. UBE3C ENSGALG00000006461 57 0.947 - - - - - - - - - 0.947 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
76. ENSGALG00000027621 ENSGALG00000027621 863 0.946 - - - - - - - - - 0.946
77. CNKSR3 ENSGALG00000027159 41 0.946 - - - - - - - - - 0.946 CNKSR family member 3, transcript variant X2
78. TM6SF2 ENSGALG00000029015 109 0.946 - - - - - - - - - 0.946 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
79. ENSGALG00000018358 ENSGALG00000018358 101 0.945 - - - - - - - - - 0.945
80. MBD4 ENSGALG00000020747 3644 0.945 - - - - - - - - - 0.945 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
81. GPR114 GPR114 46 0.945 - - - - - - - - - 0.945
82. ENSGALG00000008594 ENSGALG00000008594 54 0.944 - - - - - - - - - 0.944
83. STX6 3297 0.944 - - - - - - - - - 0.944 syntaxin 6
84. ATP2B2 ENSGALG00000030908 584 0.944 - - - - - - - - - 0.944 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
85. SOS2 ENSGALG00000012273 41 0.944 - - - - - - - - - 0.944 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
86. PMVK ENSGALG00000046656 645 0.943 - - - - - - - - - 0.943 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
87. PTPRE ENSGALG00000009823 250 0.943 - - - - - - - - - 0.943 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
88. AGMO ENSGALG00000010792 76 0.943 - - - - - - - - - 0.943 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
89. STAT5 STAT5 1796 0.942 - - - - - - - - - 0.942
90. BCOR ENSGALG00000016245 85 0.942 - - - - - - - - - 0.942 BCL6 corepressor, transcript variant X8
91. TM9SF2L ENSGALG00000006487 5566 0.941 - - - - - - - 0.941 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
92. PROCR ENSGALG00000006547 645 0.941 - - - - - - - - - 0.941 protein C receptor [Source:NCBI gene;Acc:424867]
93. LUZP1 ENSGALG00000025858 947 0.94 - - - - - - - - - 0.940 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
94. ENSGALG00000004772 ENSGALG00000004772 173 0.94 - - - - - - - - - 0.940
95. TYSND1 ENSGALG00000033807 716 0.939 - - - - - - - - - 0.939 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
96. CENPJ ENSGALG00000017148 1415 0.939 - - - - - - - - - 0.939 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
97. SNORA72 SNORA72 27695 0.938 - - - - - - - 0.938 - -
98. DTX2 ENSGALG00000001905 1475 0.938 - - - - - - - - - 0.938 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
99. TFG ENSGALG00000015299 849 0.938 - - - - - - - - - 0.938 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
100. FTSJ3 ENSGALG00000032993 8929 0.938 - - - - - - - - - 0.938 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]

There are 426 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA