Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOTAIRM1

Gene Name Gene ID Reads Annotation
HOTAIRM1 HOTAIRM1 4335











Genes with expression patterns similar to HOTAIRM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOTAIRM1 HOTAIRM1 4335 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. FZD6 ENSGALG00000030626 3336 1.689 - - - - - - 0.792 - - 0.897 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
3. AGPS ENSGALG00000009236 2250 1.687 - - - - - - 0.732 - - 0.955 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
4. RNF219 ENSGALG00000016911 4458 1.68 - - - - - - - 0.720 - 0.960 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
5. QDPR ENSGALG00000030070 6953 1.669 - - - - - - 0.720 - - 0.949 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
6. HSPE1 ENSGALG00000009070 87567 1.662 - - - - - 0.720 - - - 0.942 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
7. UCHL3 ENSGALG00000016921 16208 1.658 - - - - - - 0.701 - - 0.957 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
8. COL5A2 ENSGALG00000031112 18358 1.653 - - - - - - 0.755 - - 0.898 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
9. YIPF3 ENSGALG00000041037 6126 1.631 - - - - - - 0.722 - - 0.909 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
10. UTP23 ENSGALG00000032400 3601 1.605 - - - - - - 0.735 - - 0.870 UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
11. PSPC1 ENSGALG00000017142 13036 1.548 - - - - - - 0.744 - - 0.804 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
12. NOC4L ENSGALG00000002272 9644 1.504 - - - - - - 0.725 - - 0.779 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
13. SYNE2 ENSGALG00000011811 5542 1.427 - - - - - - 0.721 - - 0.706 spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
14. APBA3 ENSGALG00000000740 1249 0.988 - - - - - - - - - 0.988 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
15. NARS ENSGALG00000040506 9506 0.987 - - - - - - - - - 0.987 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
16. TMEM128 ENSGALG00000014992 6567 0.987 - - - - - - - - - 0.987 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
17. IL10R2 IL10R2 72 0.983 - - - - - - - - - 0.983
18. ZNF6 ZNF6 138 0.983 - - - - - - - - - 0.983
19. CPNE2 ENSGALG00000001316 236 0.983 - - - - - - - - - 0.983 copine 2 [Source:NCBI gene;Acc:415646]
20. PROM1 ENSGALG00000014496 2494 0.983 - - - - - - - - - 0.983 prominin 1 [Source:NCBI gene;Acc:422825]
21. FASTKD3 ENSGALG00000033521 1186 0.983 - - - - - - - - - 0.983 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
22. 5S_2 5S_2 58 0.983 - - - - - - - - - 0.983
23. CXADR ENSGALG00000015701 96 0.983 - - - - - - - - - 0.983 coxsackie virus and adenovirus receptor, transcript variant X2
24. FAM190B FAM190B 165 0.982 - - - - - - - - - 0.982
25. SOX6 ENSGALG00000006074 102 0.982 - - - - - - - - - 0.982 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
26. BRD1 ENSGALG00000029379 6047 0.981 - - - - - - - - - 0.981 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
27. MSI1 ENSGALG00000007227 2279 0.981 - - - - - - - - - 0.981 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
28. AURKA ENSGALG00000007768 793 0.981 - - - - - - - - - 0.981 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
29. SSH1 ENSGALG00000004928 222 0.98 - - - - - - - - - 0.980 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
30. AGGF1 ENSGALG00000004311 3011 0.98 - - - - - - - - - 0.980 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
31. ITSN2 ENSGALG00000016504 651 0.98 - - - - - - - - - 0.980 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
32. CP ENSGALG00000030773 119 0.979 - - - - - - - - - 0.979 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
33. DCAF5 ENSGALG00000009463 1297 0.979 - - - - - - - - - 0.979 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
34. PLA2G15 ENSGALG00000041787 762 0.978 - - - - - - - - - 0.978 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
35. CASKIN1 604 0.977 - - - - - - - - - 0.977 CASK interacting protein 1, transcript variant X4
36. ITGA9 ENSGALG00000029378 415 0.977 - - - - - - - - - 0.977 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
37. MTSS1 ENSGALG00000041969 1312 0.977 - - - - - - - - - 0.977 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
38. PCLO 249 0.977 - - - - - - - - - 0.977 piccolo presynaptic cytomatrix protein
39. CDH1-A CDH1-A 343 0.977 - - - - - - - - - 0.977
40. PREX2 ENSGALG00000042354 134 0.977 - - - - - - - - - 0.977 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
41. PM20D2 ENSGALG00000015779 1301 0.976 - - - - - - - - - 0.976 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
42. INTS10 ENSGALG00000010130 6320 0.976 - - - - - - - - - 0.976 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
43. RSPO2 ENSGALG00000030030 1271 0.976 - - - - - - - - - 0.976 R-spondin 2 [Source:NCBI gene;Acc:420271]
44. WDSUB1 ENSGALG00000012574 2038 0.975 - - - - - - - - - 0.975 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
45. CNTRL ENSGALG00000001513 1773 0.975 - - - - - - - - - 0.975 centriolin [Source:NCBI gene;Acc:417121]
46. ARHGAP21 ENSGALG00000007721 3961 0.975 - - - - - - - - - 0.975 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
47. TP53BP1 ENSGALG00000042201 708 0.974 - - - - - - - - - 0.974 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
48. MGA 1911 0.974 - - - - - - - - - 0.974 MGA, MAX dimerization protein, transcript variant X15
49. FAM129A ENSGALG00000004812 269 0.974 - - - - - - - - - 0.974 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
50. CRYM ENSGALG00000002484 3558 0.974 - - - - - - - - - 0.974 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
51. CETN1 ENSGALG00000026741 7243 0.974 - - - - - - - - - 0.974 centrin 1 [Source:NCBI gene;Acc:422668]
52. TXNDC11 ENSGALG00000003154 2224 0.974 - - - - - - - - - 0.974 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
53. C14orf80 C14orf80 1921 0.974 - - - - - - - - - 0.974
54. HAUS8 ENSGALG00000003727 351 0.973 - - - - - - - - - 0.973 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
55. FRMD3 ENSGALG00000012577 999 0.973 - - - - - - - - - 0.973 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
56. MAN1A2 451 0.973 - - - - - - - - - 0.973 mannosidase alpha class 1A member 2
57. FSTL4 ENSGALG00000031487 529 0.972 - - - - - - - - - 0.972 follistatin like 4 [Source:NCBI gene;Acc:395163]
58. SLC2A3 SLC2A3 527 0.972 - - - - - - - - - 0.972
59. MYH1D ENSGALG00000027323 365 0.971 - - - - - - - - - 0.971 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
60. WHSC1 1712 0.971 - - - - - - - - - 0.971 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
61. SGSH ENSGALG00000007027 1115 0.971 - - - - - - - - - 0.971 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
62. CLSPN ENSGALG00000002346 2590 0.971 - - - - - - - - - 0.971 claspin [Source:NCBI gene;Acc:428223]
63. STRADA ENSGALG00000000550 6912 0.971 - - - - - - - - - 0.971 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
64. PTX3 ENSGALG00000028284 2984 0.971 - - - - - - - - - 0.971 pentraxin 3 [Source:NCBI gene;Acc:548626]
65. RTN4R ENSGALG00000007732 1515 0.971 - - - - - - - - - 0.971 reticulon 4 receptor
66. MB21D1 2460 0.971 - - - - - - - - - 0.971 Mab-21 domain containing 1
67. SUV39H2 ENSGALG00000013920 4360 0.97 - - - - - - - - - 0.970 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
68. C10orf118 C10orf118 762 0.969 - - - - - - - - - 0.969
69. PDPN ENSGALG00000030096 647 0.969 - - - - - - - - - 0.969 podoplanin, transcript variant X4
70. MPRIP ENSGALG00000004798 6700 0.969 - - - - - - - - - 0.969 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
71. CPNE1 ENSGALG00000040856 610 0.969 - - - - - - - - - 0.969 copine 1 [Source:NCBI gene;Acc:419134]
72. CCT8 ENSGALG00000015821 12161 0.969 - - - - - - - - - 0.969 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
73. GRK4 ENSGALG00000015645 1065 0.968 - - - - - - - - - 0.968 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
74. ERI2 1087 0.968 - - - - - - - - - 0.968 ERI1 exoribonuclease family member 2, transcript variant X1
75. SLC39A13 ENSGALG00000008122 2003 0.967 - - - - - - - - - 0.967 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
76. DIAPH3 ENSGALG00000016937 1069 0.967 - - - - - - - - - 0.967 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
77. ACADL ENSGALG00000002891 8058 0.966 - - - - - - - - - 0.966 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
78. SPDL1 ENSGALG00000001942 4403 0.966 - - - - - - - - - 0.966 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
79. HYAL3 ENSGALG00000029000 712 0.966 - - - - - - - - - 0.966 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
80. ESRRG ENSGALG00000009645 2783 0.965 - - - - - - - - - 0.965 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
81. NCAPG2 ENSGALG00000006525 2319 0.965 - - - - - - - - - 0.965 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
82. RHOT1 ENSGALG00000003397 5149 0.964 - - - - - - - - - 0.964 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
83. WFDC1 ENSGALG00000005503 6152 0.964 - - - - - - - - - 0.964 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
84. RAD50 ENSGALG00000006794 4308 0.964 - - - - - - - - - 0.964 RAD50 double strand break repair protein, transcript variant X4
85. MRPL50 ENSGALG00000015543 11649 0.964 - - - - - - - - - 0.964 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
86. TBC1D19 ENSGALG00000029673 1868 0.964 - - - - - - - - - 0.964 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
87. PNPT1 ENSGALG00000043545 1306 0.964 - - - - - - - - - 0.964 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
88. C26H6ORF89 C26H6ORF89 1826 0.964 - - - - - - - - - 0.964
89. MYOCD ENSGALG00000001021 351 0.963 - - - - - - - - - 0.963 myocardin [Source:NCBI gene;Acc:427790]
90. ASB3 ENSGALG00000008176 5422 0.963 - - - - - - - - - 0.963 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
91. CCDC51 ENSGALG00000006465 1845 0.963 - - - - - - - - - 0.963 coiled-coil domain containing 51, transcript variant X1
92. ZFR ENSGALG00000003235 8466 0.963 - - - - - - - - - 0.963 zinc finger RNA binding protein, transcript variant X3
93. ASAP2 ENSGALG00000016419 1393 0.963 - - - - - - - - - 0.963 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
94. TANGO2 ENSGALG00000002056 1971 0.963 - - - - - - - - - 0.963 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
95. UQCR11 ENSGALG00000001096 25245 0.963 - - - - - - - - - 0.963 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
96. SPTSSA ENSGALG00000025755 3361 0.962 - - - - - - - - - 0.962 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
97. LRRN4 ENSGALG00000008815 481 0.962 - - - - - - - - - 0.962 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
98. FBXO21 ENSGALG00000008201 2608 0.962 - - - - - - - - - 0.962 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
99. ENSGALG00000005389 ENSGALG00000005389 553 0.962 - - - - - - - - - 0.962
100. CPSF2 ENSGALG00000010783 5236 0.962 - - - - - - - - - 0.962 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]

There are 517 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA