Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HIGD1A

Gene Name Gene ID Reads Annotation
HIGD1A ENSGALG00000030775 5724 HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]











Genes with expression patterns similar to HIGD1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HIGD1A ENSGALG00000030775 5724 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
2. C11H16ORF80 C11H16ORF80 18673 1.557 - - - - - - 0.779 0.778 - -
3. CXCR4 ENSGALG00000012357 1320 1.55 - - - - - 0.811 - 0.739 - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
4. NUP85 ENSGALG00000007974 21249 1.52 - - - - - - 0.709 0.811 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
5. DCPS ENSGALG00000031143 10191 1.469 - - - - - - 0.739 0.730 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
6. BPNT1 ENSGALG00000009576 7445 1.454 - - - - - - 0.752 0.702 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
7. NSG1 ENSGALG00000015010 5829 1.437 - - - - - 0.728 - 0.709 - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
8. GART ENSGALG00000037076 4264 1.437 - - - - - - 0.706 0.731 - - phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase [Source:NCBI gene;Acc:395315]
9. R3HDM1 ENSGALG00000012246 6580 1.429 - - - - - - 0.703 0.726 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
10. ZFAND5 ENSGALG00000015144 9053 0.846 - - - - - - - 0.846 - - zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
11. NNT ENSGALG00000014869 8496 0.82 - - - - - - - 0.820 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
12. SSR1 ENSGALG00000012798 62626 0.816 - - - - - - - 0.816 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
13. PASK ENSGALG00000006016 3096 0.813 - - - - - - - 0.813 - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
14. PAK1IP1 ENSGALG00000012724 10907 0.808 - - - - - - - 0.808 - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
15. ANLN 10479 0.806 - - - - - - - 0.806 - - anillin actin binding protein, transcript variant X2
16. PCDH18 ENSGALG00000009732 6634 0.806 - - - - - - - 0.806 - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
17. LFNG ENSGALG00000038515 5178 0.8 - - - - - 0.800 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
18. HINT3 ENSGALG00000044342 5674 0.8 - - - - - - - 0.800 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
19. NOP16 ENSGALG00000003355 10692 0.794 - - - - - - - 0.794 - - NOP16 nucleolar protein
20. INTS2 ENSGALG00000005269 6966 0.793 - - - - - - 0.793 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
21. SLMO2 SLMO2 9207 0.792 - - - - - - - 0.792 - -
22. SF3B3 ENSGALG00000002531 19397 0.792 - - - - - - - 0.792 - - splicing factor 3b subunit 3, transcript variant X2
23. ALDH18A1 ENSGALG00000034655 3038 0.789 - - - - - - - 0.789 - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
24. BORA ENSGALG00000016931 3660 0.788 - - - - - - - 0.788 - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
25. RSL1D1 ENSGALG00000033690 13638 0.786 - - - - - - 0.786 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
26. MSX2 ENSGALG00000038848 6950 0.783 - - - - - - - 0.783 - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
27. UBE2V1 ENSGALG00000008015 17947 0.782 - - - - - - 0.782 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
28. SIVA1 ENSGALG00000011619 15130 0.781 - - - - - - 0.781 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
29. GPR162 ENSGALG00000022926 7181 0.779 - - - - - - - 0.779 - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
30. SASS6 ENSGALG00000005302 4029 0.778 - - - - - - - 0.778 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
31. NANS ENSGALG00000015320 10552 0.777 - - - - - - - 0.777 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
32. RRP1B ENSGALG00000035696 12309 0.777 - - - - - - - 0.777 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
33. DACH1 ENSGALG00000037015 5648 0.776 - - - - - 0.776 - - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
34. SNX24 ENSGALG00000018874 4482 0.776 - - - - - - - 0.776 - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
35. ZIC3 ENSGALG00000031144 863 0.775 - - - - - 0.775 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
36. TM4SF18 4553 0.774 - - - - - - - 0.774 - - transmembrane 4 L six family member 18, transcript variant X2
37. C17H9ORF16 C17H9ORF16 7908 0.773 - - - - - - 0.773 - - -
38. PARP1 ENSGALG00000009228 39433 0.773 - - - - - - 0.773 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
39. SDF2L1 ENSGALG00000031982 6084 0.771 - - - - - - - 0.771 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
40. NAF1 ENSGALG00000009496 2003 0.769 - - - - - - - 0.769 - - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
41. C1GALT1 ENSGALG00000009752 7148 0.768 - - - - - - - 0.768 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
42. UBE2J2 ENSGALG00000001848 6527 0.766 - - - - - - 0.766 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
43. KIF2C ENSGALG00000010120 8999 0.766 - - - - - - 0.766 - - - kinesin family member 2C, transcript variant X1
44. LBH ENSGALG00000009052 5545 0.766 - - - - - - - 0.766 - - limb bud and heart development [Source:NCBI gene;Acc:421301]
45. TAF15 ENSGALG00000002060 12320 0.766 - - - - - - 0.766 - - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
46. TUBB2C TUBB2C 44249 0.765 - - - - - - 0.765 - - -
47. EIF5B ENSGALG00000016764 30681 0.765 - - - - - - - 0.765 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
48. DRAXIN ENSGALG00000004631 3122 0.764 - - - - - 0.764 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
49. UNC119B ENSGALG00000026722 8622 0.764 - - - - - - - 0.764 - - unc-119 lipid binding chaperone B [Source:HGNC Symbol;Acc:HGNC:16488]
50. HGF/SF HGF/SF 345 0.763 - - - - - - - 0.763 - -
51. ENSGALG00000001861 ENSGALG00000001861 10150 0.762 - - - - - - - 0.762 - -
52. MKKS ENSGALG00000009013 9301 0.762 - - - - - - - 0.762 - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
53. MTAP ENSGALG00000008174 10976 0.762 - - - - - - - 0.762 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
54. INCENP ENSGALG00000007537 16617 0.762 - - - - - - - 0.762 - - inner centromere protein [Source:NCBI gene;Acc:396270]
55. SMARCA5 ENSGALG00000009913 20059 0.761 - - - - - - 0.761 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
56. SETD3 ENSGALG00000034802 4125 0.761 - - - - - - - 0.761 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
57. FADS1 ENSGALG00000007127 5231 0.759 - - - - - - - 0.759 - - fatty acid desaturase 1
58. CSRP2 ENSGALG00000029921 6629 0.759 - - - - - - - 0.759 - - cysteine and glycine rich protein 2 [Source:NCBI gene;Acc:396128]
59. RFC1 ENSGALG00000014298 6516 0.759 - - - - - - 0.759 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
60. RIOK2 ENSGALG00000015288 6280 0.759 - - - - - - - 0.759 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
61. LSM5 ENSGALG00000041625 22307 0.758 - - - - - - 0.758 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
62. MYC ENSGALG00000033631 16949 0.758 - - - - - - - 0.758 - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
63. PPP2R5D ENSGALG00000040005 6804 0.757 - - - - - - 0.757 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
64. MRPL47 ENSGALG00000013759 9044 0.757 - - - - - - 0.757 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
65. URM1 ENSGALG00000004971 17880 0.757 - - - - - - - 0.757 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
66. TSR1 7656 0.757 - - - - - - - 0.757 - - TSR1, ribosome maturation factor
67. DAD1 ENSGALG00000035626 32604 0.757 - - - - - - - 0.757 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
68. NAA20 ENSGALG00000012587 11349 0.757 - - - - - - 0.757 - - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
69. KLHL21 ENSGALG00000035211 6145 0.756 - - - - - - 0.756 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
70. ANAPC5 ENSGALG00000004179 4087 0.756 - - - - - - - 0.756 - - anaphase promoting complex subunit 5 [Source:NCBI gene;Acc:416842]
71. DIS3 ENSGALG00000016930 3696 0.756 - - - - - - - 0.756 - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
72. RIT1 ENSGALG00000014647 7174 0.756 - - - - - - - 0.756 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
73. CHAF1B ENSGALG00000016042 748 0.755 - - - - - - - 0.755 - - chromatin assembly factor 1 subunit B [Source:NCBI gene;Acc:418514]
74. ELOVL4 ENSGALG00000015876 853 0.755 - - - - - 0.755 - - - - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
75. ZCCHC6 ENSGALG00000012607 3655 0.755 - - - - - - - 0.755 - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
76. NDC80 ENSGALG00000014801 3237 0.753 - - - - - - - 0.753 - - NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
77. PRADC1 ENSGALG00000016089 997 0.753 - - - - - 0.753 - - - - protease associated domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16047]
78. RBM17 ENSGALG00000006332 12656 0.753 - - - - - - 0.753 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
79. SMPD3 ENSGALG00000034950 4335 0.752 - - - - - 0.752 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
80. AXIN2 ENSGALG00000039200 2333 0.752 - - - - - 0.752 - - - - axin 2 [Source:NCBI gene;Acc:395152]
81. C15orf27 C15orf27 1206 0.752 - - - - - - 0.752 - - -
82. ARMC8 ENSGALG00000040889 2456 0.752 - - - - - - 0.752 - - - armadillo repeat containing 8 [Source:NCBI gene;Acc:424731]
83. FASN ENSGALG00000040896 17372 0.752 - - - - - 0.752 - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
84. BMP7 ENSGALG00000007668 6645 0.752 - - - - - 0.752 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
85. LLPH ENSGALG00000019358 20976 0.752 - - - - - - 0.752 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
86. ENSGALG00000028164 ENSGALG00000028164 3325 0.751 - - - - - - - 0.751 - -
87. SPCS2 ENSGALG00000019036 9496 0.751 - - - - - - - 0.751 - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
88. TRAPPC6B ENSGALG00000010157 7567 0.75 - - - - - - 0.750 - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
89. VENTX VENTX 50 0.75 - - - - - - - 0.750 - -
90. MRPL30 ENSGALG00000016760 16965 0.749 - - - - - - 0.749 - - - mitochondrial ribosomal protein L30
91. FRMD4B ENSGALG00000037791 2457 0.749 - - - - - - - 0.749 - - FERM domain containing 4B [Source:HGNC Symbol;Acc:HGNC:24886]
92. FNBP1L ENSGALG00000005850 9219 0.749 - - - - - - 0.749 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
93. TMX4 ENSGALG00000028587 3513 0.749 - - - - - - - 0.749 - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
94. YWHAZ ENSGALG00000031387 84985 0.749 - - - - - - 0.749 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
95. CRABP-I ENSGALG00000003193 67258 0.748 - - - - - 0.748 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
96. TRUB2 ENSGALG00000004920 5425 0.748 - - - - - - - 0.748 - - TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
97. RRP7A ENSGALG00000011866 7718 0.748 - - - - - - - 0.748 - - ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]
98. NCBP2_1 ENSGALG00000006843 7170 0.748 - - - - - - - 0.748 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
99. UTP15 ENSGALG00000013510 13122 0.747 - - - - - - - 0.747 - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
100. MYL4 ENSGALG00000000585 16982 0.747 - - - - - 0.747 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]

There are 211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA