Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for H3-IX

Gene Name Gene ID Reads Annotation
H3-IX H3-IX 155627











Genes with expression patterns similar to H3-IX

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. H3-IX H3-IX 155627 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. FZD2 ENSGALG00000030847 3286 0.804 - - 0.804 - - - - - - - frizzled class receptor 2 [Source:NCBI gene;Acc:374061]
3. MBIP ENSGALG00000010096 2476 0.798 - - 0.798 - - - - - - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
4. ISCU ENSGALG00000004869 6852 0.791 - - 0.791 - - - - - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
5. SH3GLB1 ENSGALG00000006284 12764 0.79 - - 0.790 - - - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
6. TXNDC12 ENSGALG00000010569 13822 0.789 - - 0.789 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
7. UBE3B ENSGALG00000013851 1672 0.789 - - 0.789 - - - - - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
8. ALDH7A1 ENSGALG00000008229 5891 0.787 - - 0.787 - - - - - - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
9. DNAJC18 ENSGALG00000002528 2666 0.785 - - 0.785 - - - - - - - DnaJ heat shock protein family (Hsp40) member C18 [Source:NCBI gene;Acc:416189]
10. WDR61 ENSGALG00000003221 11352 0.782 - - 0.782 - - - - - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
11. GNMT ENSGALG00000043290 3288 0.782 - - 0.782 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
12. GUK1 ENSGALG00000005336 5134 0.781 - - 0.781 - - - - - - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
13. EXTL2 ENSGALG00000027984 808 0.779 - - 0.779 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
14. FAM134A 1600 0.776 - - 0.776 - - - - - - - family with sequence similarity 134 member A
15. GBGT1 ENSGALG00000003340 399 0.775 - - 0.775 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
16. GBAS 18453 0.775 - - 0.775 - - - - - - - glioblastoma amplified sequence
17. TANC1 ENSGALG00000012570 4196 0.775 - - 0.775 - - - - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
18. SULT2B1L1 ENSGALG00000023472 569 0.773 - - 0.773 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
19. FURIN ENSGALG00000008341 2609 0.773 - - 0.773 - - - - - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
20. SPTY2D1 ENSGALG00000006355 994 0.773 - - 0.773 - - - - - - - SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
21. NIPSNAP3L ENSGALG00000027334 7514 0.77 - - 0.770 - - - - - - - nipsnap homolog 3-like
22. RFNG ENSGALG00000002841 1643 0.766 - - 0.766 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395789]
23. ZOV3 ZOV3 3267 0.766 - - 0.766 - - - - - - -
24. MPG ENSGALG00000028691 1874 0.766 - - 0.766 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
25. MAK16 ENSGALG00000001663 7455 0.765 - - 0.765 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
26. TMED5 27507 0.765 - - 0.765 - - - - - - - transmembrane p24 trafficking protein 5
27. USP40 ENSGALG00000004228 1137 0.765 - - 0.765 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
28. FBF1 ENSGALG00000002179 1738 0.764 - - 0.764 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
29. SYBU ENSGALG00000036527 1221 0.764 - - 0.764 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
30. PTPN11 ENSGALG00000004821 2658 0.763 - - 0.763 - - - - - - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
31. ZNF276 ENSGALG00000000513 2410 0.761 - - 0.761 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
32. WDR11 ENSGALG00000035013 3393 0.76 - - 0.760 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
33. TBC1D12 ENSGALG00000034044 5588 0.759 - - 0.759 - - - - - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
34. PKP4 ENSGALG00000012561 3087 0.759 - - 0.759 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
35. GOLGA2 ENSGALG00000004881 677 0.759 - - 0.759 - - - - - - - golgin A2, transcript variant X7
36. KLHL15 ENSGALG00000016345 1638 0.758 - - 0.758 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
37. MELK ENSGALG00000016438 9237 0.758 - - 0.758 - - - - - - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
38. LRR1 ENSGALG00000012230 1062 0.758 - - 0.758 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
39. GARNL3 ENSGALG00000000847 3423 0.756 - - 0.756 - - - - - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
40. LTA4H ENSGALG00000033709 15826 0.755 - - 0.755 - - - - - - - leukotriene A4 hydrolase [Source:NCBI gene;Acc:417918]
41. MAN1A1 ENSGALG00000014878 1061 0.755 - - 0.755 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
42. RPL29 ENSGALG00000026978 271790 0.755 0.755 - - - - - - - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
43. LYPD6B ENSGALG00000028759 831 0.755 - - 0.755 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
44. NCAPD3 ENSGALG00000001491 221 0.755 - - 0.755 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
45. NOA1 ENSGALG00000038585 2907 0.755 - - 0.755 - - - - - - - nitric oxide associated 1 [Source:HGNC Symbol;Acc:HGNC:28473]
46. LGALS3 ENSGALG00000012173 3306 0.754 - - 0.754 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
47. CCT7 ENSGALG00000016088 2824 0.754 - - 0.754 - - - - - - - chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
48. EYA3 ENSGALG00000000777 922 0.754 - - 0.754 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:NCBI gene;Acc:395717]
49. LZIC ENSGALG00000002616 9052 0.753 - - 0.753 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
50. ATPAF1 ENSGALG00000010444 3677 0.753 - - 0.753 - - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
51. C19H17ORF85 C19H17ORF85 2538 0.753 - - 0.753 - - - - - - -
52. WDR89 ENSGALG00000011827 1481 0.752 - - 0.752 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
53. DECR1 ENSGALG00000036990 6360 0.751 - - 0.751 - - - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
54. ACOT9 ENSGALG00000016351 330 0.751 - - 0.751 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
55. MRPL53 ENSGALG00000037867 6100 0.751 - - 0.751 - - - - - - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
56. TGIF1 ENSGALG00000014795 2378 0.75 - - 0.750 - - - - - - - TGFB induced factor homeobox 1 [Source:NCBI gene;Acc:396339]
57. EIF2AK2 ENSGALG00000010560 749 0.75 - - 0.750 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
58. DPH3 3317 0.75 - - 0.750 - - - - - - - diphthamide biosynthesis 3
59. TMEM128 ENSGALG00000014992 6567 0.749 - - 0.749 - - - - - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
60. AP3M1 ENSGALG00000005070 712 0.749 - - 0.749 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
61. ADAMTS2 ENSGALG00000032974 141 0.748 - - 0.748 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
62. COX7A2L ENSGALG00000037996 13646 0.748 - - 0.748 - - - - - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
63. FOPNL ENSGALG00000006532 2922 0.748 - - 0.748 - - - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
64. SPON2 ENSGALG00000038433 1240 0.748 - - 0.748 - - - - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
65. FRMD3 ENSGALG00000012577 999 0.748 - - 0.748 - - - - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
66. RSL1D1 ENSGALG00000033690 13638 0.748 - - 0.748 - - - - - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
67. TRIP11 ENSGALG00000010763 3146 0.748 - - 0.748 - - - - - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
68. SORCS1 ENSGALG00000008465 468 0.748 - - 0.748 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
69. ATP2B2 ENSGALG00000030908 584 0.748 - - 0.748 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
70. RPS24 ENSGALG00000004871 173117 0.747 0.747 - - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
71. SMARCB1 ENSGALG00000005983 20548 0.747 - - 0.747 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
72. LHFP 167 0.747 - - 0.747 - - - - - - - lipoma HMGIC fusion partner
73. ZFAND2B ENSGALG00000029226 4107 0.746 - - 0.746 - - - - - - - zinc finger AN1-type containing 2B [Source:HGNC Symbol;Acc:HGNC:25206]
74. NDUFS5 ENSGALG00000003625 27698 0.746 - - 0.746 - - - - - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
75. KIAA0195 KIAA0195 48 0.746 - - 0.746 - - - - - - -
76. MT1 MT1 218 0.746 - - 0.746 - - - - - - -
77. INTS9 ENSGALG00000016631 742 0.746 - - 0.746 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
78. LATS1 ENSGALG00000012386 3455 0.746 - - 0.746 - - - - - - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
79. ZNF423 ENSGALG00000003891 103 0.745 - - 0.745 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
80. IP6K1 ENSGALG00000002510 827 0.744 - - 0.744 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
81. YLPM1 671 0.744 - - 0.744 - - - - - - - YLP motif containing 1
82. ARF4 ENSGALG00000005622 50567 0.744 - - 0.744 - - - - - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
83. SLC4A4 ENSGALG00000031105 534 0.744 - - 0.744 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
84. KIAA0930 ENSGALG00000014226 1243 0.744 - - 0.744 - - - - - - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
85. MGMT ENSGALG00000042949 53 0.744 - - 0.744 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
86. C10orf11 C10orf11 3087 0.744 - - 0.744 - - - - - - -
87. CTIF ENSGALG00000035912 1705 0.743 - - 0.743 - - - - - - - cap binding complex dependent translation initiation factor [Source:HGNC Symbol;Acc:HGNC:23925]
88. ENSGALG00000023180 ENSGALG00000023180 83 0.743 - - 0.743 - - - - - - -
89. PLEKHG5 ENSGALG00000027476 42 0.743 - - 0.743 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
90. FBXO34 ENSGALG00000032563 656 0.743 - - 0.743 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
91. CXorf30 CXorf30 172 0.742 - - 0.742 - - - - - - -
92. RHOC ENSGALG00000001569 53 0.742 - - 0.742 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
93. TRIM37 ENSGALG00000005084 4036 0.742 - - 0.742 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
94. GRIK3 ENSGALG00000002098 111 0.742 - - 0.742 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
95. TMEM104 ENSGALG00000007747 2390 0.742 - - 0.742 - - - - - - - transmembrane protein 104 [Source:NCBI gene;Acc:422110]
96. RMND1 ENSGALG00000012968 2029 0.741 - - 0.741 - - - - - - - required for meiotic nuclear division 1 homolog [Source:HGNC Symbol;Acc:HGNC:21176]
97. POMC ENSGALG00000016600 99 0.741 - - 0.741 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
98. AXIN1 ENSGALG00000029402 2802 0.74 - - 0.740 - - - - - - - axin 1 [Source:NCBI gene;Acc:395786]
99. CHPKCI CHPKCI 36217 0.74 0.740 - - - - - - - - -
100. AMMECR1L ENSGALG00000026728 2134 0.74 - - 0.740 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]

There are 98 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA