Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GSC

Gene Name Gene ID Reads Annotation
GSC ENSGALG00000010974 7 goosecoid homeobox [Source:NCBI gene;Acc:396273]











Genes with expression patterns similar to GSC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GSC ENSGALG00000010974 7 4 - - 1.000 1.000 - 1.000 - - - 1.000 goosecoid homeobox [Source:NCBI gene;Acc:396273]
2. PIFO ENSGALG00000023763 11 1.776 - - - - - 1.000 - - - 0.776 primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
3. VNN1 ENSGALG00000013993 11 1.638 - - 0.862 - - - - - - 0.776 vanin 1 [Source:NCBI gene;Acc:421702]
4. ENSGALG00000024397 ENSGALG00000024397 2 1 - - 1.000 - - - - - - -
5. CARD8 ENSGALG00000007698 45 1 - - - 1.000 - - - - - - caspase recruitment domain family, member 8
6. RCBTB2 ENSGALG00000017000 3 1 - - - 1.000 - - - - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
7. GPR65 ENSGALG00000010595 2 1 - - - 1.000 - - - - - - G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
8. TRPV6 ENSGALG00000014746 3 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
9. SNTG2 ENSGALG00000016367 42 1 - - 1.000 - - - - - - - syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
10. SLC26A5 ENSGALG00000008222 3 1 - - - 1.000 - - - - - - solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
11. SAMD8 ENSGALG00000005004 2 1 - - 1.000 - - - - - - - sterile alpha motif domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26320]
12. SAPCD2 12 1 - - - 1.000 - - - - - - suppressor APC domain containing 2, transcript variant X1
13. KLHL38 ENSGALG00000038946 1 1 - - - 1.000 - - - - - - kelch like family member 38 [Source:HGNC Symbol;Acc:HGNC:34435]
14. TDRKH ENSGALG00000031812 1 1 - - 1.000 - - - - - - - tudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]
15. ENSGALG00000013164 ENSGALG00000013164 3 1 - - 1.000 - - - - - - -
16. CALCRL ENSGALG00000002632 4 1 - - - 1.000 - - - - - - calcitonin receptor like receptor [Source:NCBI gene;Acc:423990]
17. C11orf49 ENSGALG00000008255 36 1 - - 1.000 - - - - - - - chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
18. ANGPTL5 ENSGALG00000017191 2 1 - - - 1.000 - - - - - - angiopoietin like 5 [Source:NCBI gene;Acc:772036]
19. TOM1L1 ENSGALG00000003011 1 1 - - 1.000 - - - - - - - target of myb1 like 1 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11983]
20. ENSGALG00000026155 ENSGALG00000026155 49 1 - - 1.000 - - - - - - -
21. FAM110B ENSGALG00000035065 1 1 - - 1.000 - - - - - - - family with sequence similarity 110 member B [Source:HGNC Symbol;Acc:HGNC:28587]
22. SMG5 ENSGALG00000029918 8 1 - - - 1.000 - - - - - - SMG5, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:24644]
23. OLFM4 ENSGALG00000016943 7 1 - - 1.000 - - - - - - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
24. ANKRD44 ENSGALG00000007996 17 1 - - - 1.000 - - - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
25. KIAA1199 KIAA1199 6 1 - - 1.000 - - - - - - -
26. Mar-11 Mar-11 16 1 - - 1.000 - - - - - - -
27. WWTR1 ENSGALG00000010412 5 1 - - 1.000 - - - - - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
28. TPCN1 ENSGALG00000008357 28 1 - - 1.000 - - - - - - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
29. GUCY1B3 29 1 - - - 1.000 - - - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
30. SH3GL3 ENSGALG00000006045 12 1 - - - 1.000 - - - - - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
31. AMOTL1 ENSGALG00000017208 5 1 - - - 1.000 - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
32. FRY ENSGALG00000017075 8 1 - - 1.000 - - - - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
33. DAPK2 ENSGALG00000003336 3 1 - - 1.000 - - - - - - - death associated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:2675]
34. ENSGALG00000012389 ENSGALG00000012389 6 1 - - 1.000 - - - - - - -
35. ENSGALG00000028177 ENSGALG00000028177 1 1 - - 1.000 - - - - - - -
36. TMED6 ENSGALG00000000654 8 1 - - 1.000 - - - - - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
37. 5S_1 5S_1 2 1 - - - 1.000 - - - - - -
38. ENSGALG00000027487 ENSGALG00000027487 5 1 - - 1.000 - - - - - - -
39. ZBTB40 ENSGALG00000004781 1 1 - - 1.000 - - - - - - - zinc finger and BTB domain containing 40 [Source:HGNC Symbol;Acc:HGNC:29045]
40. PALM ENSGALG00000026055 8 1 - - 1.000 - - - - - - - paralemmin [Source:NCBI gene;Acc:101750199]
41. ENSGALG00000005939 ENSGALG00000005939 1 1 - - 1.000 - - - - - - -
42. VPS9D1 ENSGALG00000023468 1 1 - - 1.000 - - - - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
43. PIGR ENSGALG00000000919 3 1 - - 1.000 - - - - - - - polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
44. ABTB2 ENSGALG00000031889 9 1 - - - 1.000 - - - - - - ankyrin repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23842]
45. ENSGALG00000004951 ENSGALG00000004951 18 0.977 - - - - - 0.977 - - - -
46. STX19 ENSGALG00000015413 28 0.976 - - - 0.976 - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
47. AIFM3 ENSGALG00000007720 28 0.944 - - 0.944 - - - - - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
48. LOC100858777 ENSGALG00000027624 58 0.943 - - - - - 0.943 - - - - rhodopsin, GQ-coupled-like
49. CBLN1 ENSGALG00000042664 15 0.937 - - 0.937 - - - - - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
50. SLC22A18 ENSGALG00000006454 24 0.928 - - - - - 0.928 - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
51. TTC36 ENSGALG00000006812 63 0.926 - - - 0.926 - - - - - - tetratricopeptide repeat domain 36 [Source:NCBI gene;Acc:419757]
52. RIPPLY2 ENSGALG00000015845 34 0.903 - - - - - - - - - 0.903 ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
53. PHYKPL ENSGALG00000023920 6 0.896 - - 0.896 - - - - - - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
54. SMC1B ENSGALG00000014228 19 0.895 - - - - - 0.895 - - - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
55. ENSGALG00000021517 ENSGALG00000021517 7 0.895 - - - - - 0.895 - - - -
56. CAPN3 ENSGALG00000009050 3 0.895 - - - - - 0.895 - - - - calpain 3 [Source:NCBI gene;Acc:423233]
57. TOR3A ENSGALG00000004216 1 0.895 - - - - - 0.895 - - - - torsin family 3 member A [Source:HGNC Symbol;Acc:HGNC:11997]
58. CRYAA ENSGALG00000016199 12 0.895 - - - - - 0.895 - - - - crystallin alpha A [Source:NCBI gene;Acc:418546]
59. ENSGALG00000011449 ENSGALG00000011449 2 0.895 - - - - - 0.895 - - - -
60. PIK3R4 ENSGALG00000040917 10 0.895 - - - - - 0.895 - - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
61. ADAMTS15 ENSGALG00000001407 11 0.895 - - - - - 0.895 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
62. GAK ENSGALG00000015352 99 0.895 - - - - - 0.895 - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
63. LIPML4 ENSGALG00000006302 2 0.895 - - - - - 0.895 - - - - lipase member M-like 4
64. EGF ENSGALG00000012155 8 0.895 - - - - - 0.895 - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
65. PBEF1 PBEF1 25 0.891 - - - - - 0.891 - - - -
66. KCNS3 ENSGALG00000016470 4 0.881 - - - - - 0.881 - - - - potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
67. ENSGALG00000010911 ENSGALG00000010911 469 0.88 - - - - - 0.880 - - - -
68. TLR15 ENSGALG00000008166 29 0.876 - - - - - 0.876 - - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
69. ENSGALG00000027164 ENSGALG00000027164 8 0.874 - - - - - 0.874 - - - -
70. ATRN ENSGALG00000016034 16 0.874 - - - - - 0.874 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
71. ENSGALG00000027367 ENSGALG00000027367 7 0.87 - - - - - 0.870 - - - -
72. ENSGALG00000023852 ENSGALG00000023852 31 0.868 - - - - - - - - - 0.868
73. FAM150B 44 0.866 - - - - - 0.866 - - - - family with sequence similarity 150 member B, transcript variant X2
74. ENSGALG00000000789 ENSGALG00000000789 24 0.864 - - - 0.864 - - - - - -
75. LRFN2 ENSGALG00000010050 28 0.86 - - - 0.860 - - - - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
76. PDE1A ENSGALG00000008885 4 0.857 - - - 0.857 - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
77. ZDHHC16 ENSGALG00000007592 19 0.856 - - 0.856 - - - - - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
78. LDB3 ENSGALG00000001977 1 0.856 - - 0.856 - - - - - - - LIM domain binding 3 [Source:NCBI gene;Acc:423610]
79. A1CF ENSGALG00000003765 36 0.855 - - - - - 0.855 - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
80. C4orf47 ENSGALG00000013287 44 0.855 - - 0.855 - - - - - - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
81. FAS ENSGALG00000006351 461 0.854 - - - - - 0.854 - - - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
82. CCDC125 ENSGALG00000015572 51 0.854 - - - - - 0.854 - - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
83. CRYBA4 ENSGALG00000005634 56 0.853 - - - - - 0.853 - - - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
84. LOC101750367 ENSGALG00000006693 5 0.849 - - - 0.849 - - - - - - BPI fold-containing family B member 4-like, transcript variant X3
85. ANKRD40L ENSGALG00000026189 887 0.849 - - - - - 0.849 - - - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
86. TDRP ENSGALG00000016356 36 0.849 - - - - - 0.849 - - - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
87. PKD2 ENSGALG00000010921 55 0.848 - - - - - 0.848 - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
88. ENSGALG00000020103 ENSGALG00000020103 64 0.844 - - - 0.844 - - - - - -
89. NAALADL2 ENSGALG00000023670 39 0.843 - - - - - 0.843 - - - - N-acetylated alpha-linked acidic dipeptidase like 2 [Source:HGNC Symbol;Acc:HGNC:23219]
90. SNORA3 SNORA3 14 0.842 - - - - - 0.842 - - - -
91. LRRC46 ENSGALG00000046384 28 0.839 - - - 0.839 - - - - - - leucine rich repeat containing 46 [Source:HGNC Symbol;Acc:HGNC:25047]
92. CCDC113 20 0.835 - - - - - 0.835 - - - - coiled-coil domain containing 113, transcript variant X2
93. GRK6 ENSGALG00000014054 6 0.832 - - - - - 0.832 - - - - G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:HGNC:4545]
94. ENSGALG00000002752 ENSGALG00000002752 4 0.827 - - 0.827 - - - - - - -
95. ACE2 ENSGALG00000016554 7 0.825 - - - - - 0.825 - - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
96. INPPL1 ENSGALG00000004336 3 0.822 - - - 0.822 - - - - - - inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
97. NR2E1 ENSGALG00000015305 3 0.822 - - - 0.822 - - - - - - nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:396082]
98. MYNN ENSGALG00000009409 11 0.815 - - 0.815 - - - - - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
99. ZBTB33 ENSGALG00000008611 15 0.814 - - - - - 0.814 - - - - zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
100. RTKN2 ENSGALG00000002980 50 0.813 - - - - - 0.813 - - - - rhotekin 2 [Source:NCBI gene;Acc:423660]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA