Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ERCC4

Gene Name Gene ID Reads Annotation
ERCC4 ENSGALG00000002981 1178 Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]











Genes with expression patterns similar to ERCC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ERCC4 ENSGALG00000002981 1178 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]
2. EX-FABP EX-FABP 516 0.929 - - - - - - - - 0.929 -
3. PHLPP1 ENSGALG00000012888 398 0.924 - - - - - - - - 0.924 - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
4. TMEM242 ENSGALG00000013689 377 0.912 - - - - - - - - 0.912 - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
5. BRD8 ENSGALG00000037646 100 0.895 - - - - - - - - 0.895 - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
6. MPP7 ENSGALG00000007408 2485 0.893 - - - - - - - - 0.893 - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
7. TTBK2 ENSGALG00000009176 196 0.879 - - - - - - - - 0.879 - tau tubulin kinase 2 [Source:HGNC Symbol;Acc:HGNC:19141]
8. MAP3K2 42 0.869 - - - - - - - - 0.869 - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
9. RLF ENSGALG00000000862 586 0.862 - - - - - - - - 0.862 - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
10. ABHD5 503 0.855 - - - - - - - - 0.855 - abhydrolase domain containing 5, transcript variant 2
11. GPR20 ENSGALG00000041730 1926 0.855 - - - - - - - - 0.855 - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
12. TRDN ENSGALG00000014848 130 0.855 - - - - - - - - 0.855 - triadin
13. ENSGALG00000027849 ENSGALG00000027849 320 0.842 - - - - - - - - 0.842 -
14. UBE2K ENSGALG00000014290 2138 0.837 - - - - - - - - 0.837 - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
15. ENSGALG00000005076 ENSGALG00000005076 286 0.834 - - - - - - - - 0.834 -
16. TSHZ3 ENSGALG00000004528 3964 0.834 - - - - - - - - 0.834 - teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]
17. TICRR ENSGALG00000006631 495 0.833 - - - - - - - - 0.833 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
18. SLC4A4 ENSGALG00000031105 534 0.829 - - - - - - - - 0.829 - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
19. GPATCH8 ENSGALG00000041556 484 0.827 - - - - - - - - 0.827 - G-patch domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29066]
20. SNAPC3 ENSGALG00000011323 1742 0.821 - - - - - - - - 0.821 - small nuclear RNA activating complex polypeptide 3 [Source:HGNC Symbol;Acc:HGNC:11136]
21. SUZ12 ENSGALG00000003277 177 0.819 - - - - - - - - 0.819 - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
22. AMBRA1 ENSGALG00000008358 2865 0.815 - - - - - - - - 0.815 - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
23. FASTKD5 ENSGALG00000045410 386 0.81 - - - - - - - - 0.810 - FAST kinase domains 5 [Source:HGNC Symbol;Acc:HGNC:25790]
24. TIPARP ENSGALG00000010256 1825 0.809 - - - - - - - 0.809 - - TCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]
25. TMEM128 ENSGALG00000014992 6567 0.809 - - - - - - - - 0.809 - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
26. PAK2 ENSGALG00000006426 283 0.805 - - - - - - - - 0.805 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
27. TMEM135 2283 0.803 - - - - - - - - 0.803 - transmembrane protein 135, transcript variant X4
28. ADNP2 ENSGALG00000035669 318 0.802 - - - - - - - - 0.802 - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
29. XPC ENSGALG00000006357 2484 0.8 - - - - - - - - 0.800 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
30. C1QL1 ENSGALG00000028031 788 0.8 - - - - - - - - 0.800 - complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]
31. FUCA1 ENSGALG00000004112 2154 0.8 - - - - - - - - 0.800 - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
32. UGGT2 ENSGALG00000016893 206 0.799 - - - - - - - - 0.799 - UDP-glucose glycoprotein glucosyltransferase 2 [Source:NCBI gene;Acc:418785]
33. KIAA1609 KIAA1609 1749 0.799 - - - - - - - - 0.799 -
34. JOSD1 ENSGALG00000041766 1445 0.798 - - - - - - - - 0.798 - Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
35. PARN ENSGALG00000003091 6363 0.796 - - - - - - - - 0.796 - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
36. RTTN ENSGALG00000013745 855 0.793 - - - - - - - - 0.793 - rotatin [Source:NCBI gene;Acc:421023]
37. MTAP ENSGALG00000008174 10976 0.791 - - - - - - - - 0.791 - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
38. C12orf5 C12orf5 1463 0.791 - - - - - - - - 0.791 -
39. CPEB1 ENSGALG00000002150 335 0.79 - - - - - - - - 0.790 - cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]
40. CNKSR2 ENSGALG00000016391 131 0.79 - - - - - - - - 0.790 - connector enhancer of kinase suppressor of Ras 2, transcript variant X1
41. HOXD4 ENSGALG00000023419 6073 0.786 - - - - - - - 0.786 - - homeobox D4 [Source:NCBI gene;Acc:424139]
42. RBMS3 ENSGALG00000011439 25 0.784 - - - - - - - - 0.784 - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
43. MMRN2 770 0.783 - - - - - - - - 0.783 - multimerin 2, transcript variant X1
44. GJB1 ENSGALG00000005541 261 0.782 - - - - - - - - 0.782 - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
45. RAD51A RAD51A 2132 0.782 - - - - - - - - 0.782 -
46. EDN3 ENSGALG00000040880 1061 0.779 - - - - - - - - 0.779 - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
47. NCAPH ENSGALG00000032270 2103 0.775 - - - - - - - - 0.775 - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
48. CHEK2 ENSGALG00000005695 1558 0.772 - - - - - - - - 0.772 - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
49. MCCC1 ENSGALG00000008785 1376 0.771 - - - - - - - - 0.771 - methylcrotonoyl-CoA carboxylase 1 [Source:NCBI gene;Acc:424962]
50. NXT2 ENSGALG00000008092 2477 0.77 - - - - - - - - 0.770 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
51. FAIM ENSGALG00000012082 1209 0.77 - - - - - - - - 0.770 - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
52. TMEM65 ENSGALG00000037371 776 0.77 - - - - - - - - 0.770 - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
53. SYNC ENSGALG00000003529 389 0.767 - - - - - - - - 0.767 - syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
54. SOX6 ENSGALG00000006074 102 0.766 - - - - - - - - 0.766 - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
55. FANCC ENSGALG00000012618 7002 0.766 - - - - - - - 0.766 - - FA complementation group C [Source:NCBI gene;Acc:427468]
56. SLC9A6 ENSGALG00000006180 1760 0.765 - - - - - - - - 0.765 - solute carrier family 9 member A6 [Source:HGNC Symbol;Acc:HGNC:11079]
57. C6H10ORF32 C6H10ORF32 7694 0.764 - - - - - - - - 0.764 -
58. SHB ENSGALG00000026811 1194 0.764 - - - - - - - 0.764 - - SH2 domain containing adaptor protein B
59. AMMECR1L ENSGALG00000026728 2134 0.764 - - - - - - - - 0.764 - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
60. DIS3 ENSGALG00000016930 3696 0.762 - - - - - - - - 0.762 - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
61. EPC1 ENSGALG00000007169 101 0.759 - - - - - - - - 0.759 - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
62. EIF2AK2 ENSGALG00000010560 749 0.758 - - - - - - - - 0.758 - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
63. ISG12(2) ISG12(2) 146 0.758 - - - - - - - - 0.758 -
64. PHF21A ENSGALG00000008403 3090 0.757 - - - - - - - 0.757 - - PHD finger protein 21A [Source:NCBI gene;Acc:423199]
65. STAM ENSGALG00000035287 7649 0.756 - - - - - - - - 0.756 - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
66. TBC1D4 ENSGALG00000016925 2961 0.755 - - - - - - - - 0.755 - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
67. ECI2 ENSGALG00000012809 3692 0.754 - - - - - - - - 0.754 - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
68. FAM207A ENSGALG00000007513 8748 0.754 - - - - - - - 0.754 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
69. SLC35D1 ENSGALG00000011121 4456 0.753 - - - - - - - - 0.753 - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
70. SNRNP35 ENSGALG00000003318 1253 0.752 - - - - - - 0.752 - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
71. HEXDC ENSGALG00000039839 936 0.751 - - - - - - - - 0.751 - hexosaminidase D [Source:HGNC Symbol;Acc:HGNC:26307]
72. CHDH ENSGALG00000005363 910 0.751 - - - - - - - - 0.751 - choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]
73. RASGEF1A ENSGALG00000002525 918 0.75 - - - - - - - - 0.750 - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
74. C3orf38 ENSGALG00000015402 1395 0.748 - - - - - - 0.748 - - - chromosome 3 open reading frame 38 [Source:HGNC Symbol;Acc:HGNC:28384]
75. LY86 ENSGALG00000012801 865 0.746 - - - - - - - - 0.746 - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
76. SNX5 ENSGALG00000008691 2108 0.746 - - - - - - - - 0.746 - sorting nexin 5 [Source:NCBI gene;Acc:416718]
77. TXLNA 6802 0.746 - - - - - - - 0.746 - - taxilin alpha, transcript variant X2
78. NIPA2 ENSGALG00000016737 3792 0.743 - - - - - - - - 0.743 - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
79. LPIN2 ENSGALG00000014836 2319 0.742 - - - - - - - 0.742 - - lipin 2 [Source:NCBI gene;Acc:421059]
80. MADD ENSGALG00000008181 2273 0.742 - - - - - - 0.742 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
81. CCDC77 ENSGALG00000012987 1267 0.741 - - - - - - 0.741 - - - coiled-coil domain containing 77 [Source:HGNC Symbol;Acc:HGNC:28203]
82. C4BPA ENSGALG00000001175 4278 0.74 - - - - - - - - 0.740 - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
83. ACBD5 ENSGALG00000007519 1646 0.74 - - - - - - - - 0.740 - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
84. DUSP23 1663 0.739 - - - - - - - - 0.739 - dual specificity phosphatase 23, transcript variant X1
85. XRCC6 ENSGALG00000011932 2302 0.739 - - - - - - 0.739 - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:NCBI gene;Acc:395767]
86. SEC62 ENSGALG00000009379 15745 0.738 - - - - - - - 0.738 - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
87. GC ENSGALG00000011612 53 0.737 - - - - - - - - 0.737 - GC, vitamin D binding protein [Source:NCBI gene;Acc:395696]
88. DCLK2 ENSGALG00000032386 2253 0.737 - - - - - - - - 0.737 - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
89. SLC29A3 1141 0.734 - - - - - - 0.734 - - - solute carrier family 29 member 3
90. TBC1D16 ENSGALG00000007054 2324 0.732 - - - - - - - - 0.732 - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
91. RAD52 ENSGALG00000039171 6989 0.732 - - - - - - 0.732 - - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
92. PLEKHA5 ENSGALG00000013134 3656 0.732 - - - - - - - 0.732 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
93. SUCO ENSGALG00000003081 4116 0.732 - - - - - - - 0.732 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
94. PTPRJ ENSGALG00000006382 891 0.729 - - - - - - 0.729 - - - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
95. SAMD13 ENSGALG00000008835 1597 0.728 - - - - - - - - - 0.728 sterile alpha motif domain containing 13 [Source:NCBI gene;Acc:424541]
96. EIF4E3 ENSGALG00000007780 1182 0.728 - - - - - - 0.728 - - - eukaryotic translation initiation factor 4E family member 3 [Source:HGNC Symbol;Acc:HGNC:31837]
97. RELL1 ENSGALG00000014336 2950 0.727 - - - - - - - - 0.727 - RELT like 1 [Source:NCBI gene;Acc:422795]
98. CEP120 ENSGALG00000005368 2013 0.727 - - - - - - 0.727 - - - centrosomal protein 120 [Source:HGNC Symbol;Acc:HGNC:26690]
99. DCLRE1A ENSGALG00000008938 1351 0.726 - - - - - - - - 0.726 - DNA cross-link repair 1A [Source:NCBI gene;Acc:423902]
100. CERK ENSGALG00000019397 4511 0.723 - - - - - - - 0.723 - - ceramide kinase [Source:NCBI gene;Acc:425523]

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA