Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EBF3

Gene Name Gene ID Reads Annotation
EBF3 ENSGALG00000010461 1373 early B cell factor 3 [Source:HGNC Symbol;Acc:HGNC:19087]











Genes with expression patterns similar to EBF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EBF3 ENSGALG00000010461 1373 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 early B cell factor 3 [Source:HGNC Symbol;Acc:HGNC:19087]
2. MEOX2 ENSGALG00000010794 1556 1.56 - - - - 0.751 0.809 - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
3. GFRA2 ENSGALG00000032856 1314 1.53 - - - - - 0.711 - 0.819 - - GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]
4. MECOM ENSGALG00000032577 5062 0.828 - - - - - - - 0.828 - - MDS1 and EVI1 complex locus [Source:HGNC Symbol;Acc:HGNC:3498]
5. AIF1L ENSGALG00000029834 13866 0.802 - - - - - 0.802 - - - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
6. FMOD ENSGALG00000034067 165 0.799 - - - - - 0.799 - - - - fibromodulin [Source:NCBI gene;Acc:395814]
7. PITX3 ENSGALG00000005613 1518 0.787 - - - - - - - - 0.787 - paired like homeodomain 3
8. PRDM16 ENSGALG00000036728 934 0.786 - - - - - - - 0.786 - - PR/SET domain 16 [Source:HGNC Symbol;Acc:HGNC:14000]
9. SERPINF1 ENSGALG00000003015 5123 0.781 - - - - - 0.781 - - - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
10. ROGDI ENSGALG00000001841 313 0.78 - - 0.780 - - - - - - - rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
11. C1QTNF3 ENSGALG00000027887 8646 0.778 - - - - 0.778 - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
12. gga-mir-2954 ENSGALG00000026107 462 0.775 - - 0.775 - - - - - - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
13. ETV4 ENSGALG00000036678 2424 0.769 - - - - - - - - 0.769 - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
14. EMX2 ENSGALG00000009302 2103 0.769 - - - - - - - 0.769 - - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
15. SPON1 ENSGALG00000038775 16503 0.762 - - - - 0.762 - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
16. FABP5 ENSGALG00000041344 3984 0.76 - - - - - 0.760 - - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
17. ENSGALG00000021882 ENSGALG00000021882 63 0.758 - - 0.758 - - - - - - -
18. DNAH7 ENSGALG00000007841 32 0.758 - - 0.758 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
19. HOXA9 ENSGALG00000028983 9298 0.756 - - 0.756 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
20. FAF1 ENSGALG00000010536 1522 0.752 - - 0.752 - - - - - - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
21. TCF15 ENSGALG00000026276 3646 0.75 - - - - - - - - 0.750 - transcription factor 15 [Source:NCBI gene;Acc:395788]
22. LRRC56 ENSGALG00000041955 16 0.749 - - 0.749 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
23. IKBIP ENSGALG00000026284 31 0.747 - - 0.747 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
24. SATB2 ENSGALG00000008135 347 0.746 - - 0.746 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
25. IPO8 ENSGALG00000012953 499 0.745 - - - - - 0.745 - - - - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
26. TBX22 ENSGALG00000004093 781 0.744 - - - - - 0.744 - - - - T-box 22 [Source:NCBI gene;Acc:373895]
27. MYT1L ENSGALG00000016384 147 0.744 - - 0.744 - - - - - - - myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
28. MTMR10 85 0.743 - - 0.743 - - - - - - - myotubularin related protein 10
29. TSPAN18 ENSGALG00000036901 14 0.742 - - 0.742 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
30. YDJC ENSGALG00000029198 14 0.742 - - 0.742 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
31. PSMD4 ENSGALG00000028505 16 0.741 - - 0.741 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
32. TWIST1 ENSGALG00000041640 1176 0.74 - - - - - 0.740 - - - - twist family bHLH transcription factor 1 [Source:NCBI gene;Acc:395491]
33. ECHDC3 ENSGALG00000006690 1299 0.739 - - 0.739 - - - - - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
34. LHX6 ENSGALG00000001347 7 0.739 - - 0.739 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
35. ENSGALG00000000407 ENSGALG00000000407 32 0.739 - - 0.739 - - - - - - -
36. ANKRD42 8 0.739 - - 0.739 - - - - - - - ankyrin repeat domain 42
37. TPST2 ENSGALG00000005626 945 0.739 - - 0.739 - - - - - - - tyrosylprotein sulfotransferase 2 [Source:NCBI gene;Acc:416910]
38. SPTSSBL ENSGALG00000026131 70 0.739 - - 0.739 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
39. TMEM108 ENSGALG00000036412 2903 0.738 - - - - - - - - 0.738 - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
40. CPZ ENSGALG00000030209 8822 0.738 - - - - - - - 0.738 - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
41. GPR37 ENSGALG00000040954 3566 0.738 - - - - - - - 0.738 - - G protein-coupled receptor 37 [Source:NCBI gene;Acc:417748]
42. PLAG1 ENSGALG00000015407 17 0.737 - - 0.737 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
43. ENSGALG00000029120 ENSGALG00000029120 73 0.736 - - 0.736 - - - - - - -
44. ENSGALG00000006278 ENSGALG00000006278 202 0.736 - - 0.736 - - - - - - -
45. DSG2 ENSGALG00000015142 67 0.735 - - 0.735 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
46. ENSGALG00000026975 ENSGALG00000026975 8 0.735 - - 0.735 - - - - - - -
47. PAX1 ENSGALG00000039040 3339 0.734 - - - - - 0.734 - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
48. HSPB8 ENSGALG00000007383 5333 0.733 - - - - 0.733 - - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
49. ASTL ENSGALG00000037220 2775 0.733 - - - - - - - 0.733 - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
50. REEP2 ENSGALG00000017365 338 0.729 - - 0.729 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
51. CYP3A4 ENSGALG00000004436 75 0.728 - - 0.728 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
52. LOX ENSGALG00000028063 1488 0.727 - - - - 0.727 - - - - - lysyl oxidase [Source:NCBI gene;Acc:396474]
53. OSF-2 OSF-2 10433 0.725 - - - - - - - 0.725 - -
54. NPY ENSGALG00000010983 441 0.724 - - 0.724 - - - - - - - neuropeptide Y [Source:NCBI gene;Acc:396464]
55. COL9A3 ENSGALG00000005628 2842 0.723 - - - - 0.723 - - - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
56. TMEM230 ENSGALG00000036876 55 0.723 - - 0.723 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
57. EYA1 ENSGALG00000043033 1048 0.722 - - - - - - - 0.722 - - EYA transcriptional coactivator and phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3519]
58. SPSB3 ENSGALG00000002285 1329 0.721 - - 0.721 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
59. SLC9A7 ENSGALG00000016734 146 0.721 - - 0.721 - - - - - - - solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]
60. SLCO4C1 ENSGALG00000026768 30 0.719 - - 0.719 - - - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
61. NSL1/DC31 NSL1/DC31 43 0.719 - - 0.719 - - - - - - -
62. MYOG ENSGALG00000000172 460 0.718 - - - - 0.718 - - - - - myogenin [Source:NCBI gene;Acc:374004]
63. ENKUR ENSGALG00000007680 637 0.717 - - 0.717 - - - - - - - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
64. LCOR ENSGALG00000028512 30 0.716 - - 0.716 - - - - - - - ligand dependent nuclear receptor corepressor, transcript variant X16
65. CNTF ENSGALG00000026207 47 0.716 - - 0.716 - - - - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
66. FNDC7 ENSGALG00000001983 24 0.714 - - 0.714 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
67. AUH ENSGALG00000021843 349 0.714 - - 0.714 - - - - - - - AU RNA binding methylglutaconyl-CoA hydratase [Source:NCBI gene;Acc:427269]
68. NPM3 ENSGALG00000032329 21138 0.713 - - - - - 0.713 - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
69. GPI ENSGALG00000004956 40030 0.712 - - - - - - - - 0.712 - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
70. ALDH6 ALDH6 771 0.711 - - - - - 0.711 - - - -
71. NEK6 ENSGALG00000001118 20333 0.71 - - - - - - - - 0.710 - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
72. NMRK1 ENSGALG00000015156 88 0.71 - - 0.710 - - - - - - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
73. MMP9 ENSGALG00000006992 78 0.71 - - 0.710 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
74. FGF10 ENSGALG00000014872 20 0.708 - - - - - - - 0.708 - - fibroblast growth factor 10 [Source:NCBI gene;Acc:395432]
75. DENND6B ENSGALG00000043771 22 0.708 - - - - - - - 0.708 - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
76. TAC1 ENSGALG00000009737 2211 0.707 - - - - - - - 0.707 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
77. TMSB4X ENSGALG00000026383 293046 0.706 - - - - - - - - 0.706 - Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
78. PLEKHJ1 ENSGALG00000000835 55 0.705 - - 0.705 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
79. MNX1 ENSGALG00000041154 244 0.704 - - - - - - - 0.704 - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
80. FAT3 ENSGALG00000017229 141 0.703 - - 0.703 - - - - - - - FAT atypical cadherin 3 [Source:NCBI gene;Acc:395167]
81. CDERMO-1 CDERMO-1 279 0.702 - - - - - 0.702 - - - -
82. PRKCZ ENSGALG00000001270 12 0.7 - - 0.700 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA