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Results for COL28A1

Gene Name Gene ID Reads Annotation
COL28A1 ENSGALG00000010259 0 collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]











Genes with expression patterns similar to COL28A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL28A1 ENSGALG00000010259 0 1 - - - 1.000 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
2. GABRG1 ENSGALG00000020143 5 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
3. IL5RA ENSGALG00000008267 7 1 - - - 1.000 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
4. METTL21C ENSGALG00000016864 0 1 - - - 1.000 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
5. TRPM8 ENSGALG00000004116 2 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
6. CCDC33 7 1 - - - 1.000 - - - - - - coiled-coil domain containing 33, transcript variant X2
7. PLEK ENSGALG00000008756 1 1 - - - 1.000 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
8. KCNK10 ENSGALG00000010598 7 1 - - - 1.000 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
9. SMYD3 ENSGALG00000010653 14 1 - - - 1.000 - - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
10. DLX1 ENSGALG00000018439 16 1 - - - 1.000 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
11. SH3BP5 ENSGALG00000039337 17 1 - - - 1.000 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
12. ENSGALG00000023409 ENSGALG00000023409 0 1 - - - 1.000 - - - - - -
13. CALN1 ENSGALG00000001122 0 1 - - - 1.000 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
14. FAM173B ENSGALG00000013043 4 1 - - - 1.000 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
15. BARL ENSGALG00000002170 4 1 - - - 1.000 - - - - - - bile acid receptor-like, transcript variant X2
16. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - 1.000 - - - - - -
17. WDR17 ENSGALG00000043106 4 1 - - - 1.000 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]
18. TMEM204 ENSGALG00000029047 8 1 - - - 1.000 - - - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
19. GPR132 ENSGALG00000027407 9 1 - - - 1.000 - - - - - - G protein-coupled receptor 132, transcript variant X2
20. FAXC ENSGALG00000015489 0 1 - - - 1.000 - - - - - - failed axon connections homolog [Source:HGNC Symbol;Acc:HGNC:20742]
21. ENSGALG00000026109 ENSGALG00000026109 2 1 - - - 1.000 - - - - - -
22. CLDN3 ENSGALG00000022557 189 1 - - - 1.000 - - - - - - claudin 3 [Source:NCBI gene;Acc:374029]
23. TPO ENSGALG00000016370 98 1 - - - 1.000 - - - - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
24. GABRA6 ENSGALG00000001695 3 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor alpha6 subunit [Source:NCBI gene;Acc:395931]
25. SEMA6B ENSGALG00000001171 73 1 - - - 1.000 - - - - - - Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]
26. ABCA12 ENSGALG00000003553 9 1 - - - 1.000 - - - - - - ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
27. LEPR ENSGALG00000011058 4 1 - - - 1.000 - - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
28. ZDHHC1 ENSGALG00000002091 3 1 - - - 1.000 - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
29. KCNJ3 ENSGALG00000012537 6 1 - - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
30. PKHD1 ENSGALG00000042136 8 1 - - - 1.000 - - - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
31. ENSGALG00000028707 ENSGALG00000028707 9 1 - - - 1.000 - - - - - -
32. LRRC9 2 1 - - - 1.000 - - - - - - leucine rich repeat containing 9
33. CFH ENSGALG00000002431 31 1 - - - 1.000 - - - - - - complement factor H, transcript variant X1
34. B-G B-G 2 1 - - - 1.000 - - - - - -
35. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 1 - - - 1.000 - - - - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
36. TPCN2 ENSGALG00000007550 10 1 - - - 1.000 - - - - - - two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
37. ENSGALG00000014539 ENSGALG00000014539 31 0.943 - - - 0.943 - - - - - -
38. ENSGALG00000023638 ENSGALG00000023638 16 0.86 - - - 0.860 - - - - - -
39. EPHX1L ENSGALG00000010303 16 0.845 - - - 0.845 - - - - - - epoxide hydrolase 1-like
40. LRRC19 ENSGALG00000045028 2 0.816 - - - 0.816 - - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
41. C3orf58 ENSGALG00000002347 27 0.816 - - - 0.816 - - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
42. RRP8 109 0.816 - - - 0.816 - - - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
43. GRIK4 ENSGALG00000006638 22 0.816 - - - 0.816 - - - - - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
44. ENSGALG00000010456 ENSGALG00000010456 4 0.777 - - - 0.777 - - - - - -
45. CCNT2 ENSGALG00000012207 14 0.763 - - - 0.763 - - - - - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
46. LOC415661 ENSGALG00000021451 15 0.739 - - - 0.739 - - - - - - uncharacterized oxidoreductase-like
47. DLGAP2 ENSGALG00000032937 2 0.739 - - - 0.739 - - - - - - DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]
48. SYT6 ENSGALG00000001968 1 0.739 - - - 0.739 - - - - - - synaptotagmin 6 [Source:HGNC Symbol;Acc:HGNC:18638]
49. ENSGALG00000013409 ENSGALG00000013409 4 0.73 - - - 0.730 - - - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA