Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL18A1

Gene Name Gene ID Reads Annotation
COL18A1 ENSGALG00000038311 11934 collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]











Genes with expression patterns similar to COL18A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL18A1 ENSGALG00000038311 11934 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
2. GATA5 ENSGALG00000005352 11876 2.242 - - 0.767 - - - - - 0.761 0.714 GATA binding protein 5 [Source:NCBI gene;Acc:396391]
3. HAND1 ENSGALG00000035104 2351 1.588 - - - - - - 0.793 - - 0.795 heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
4. APOA1 ENSGALG00000007114 10215 1.549 - - 0.737 - - - - - 0.812 - apolipoprotein A1 [Source:NCBI gene;Acc:396536]
5. FKBP7 ENSGALG00000009149 6742 1.536 - - - - - - 0.761 0.775 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
6. FRAS1 ENSGALG00000010316 5008 1.493 - - - - - 0.765 - - 0.728 - Fraser extracellular matrix complex subunit 1, transcript variant X2
7. MYH9 ENSGALG00000043092 3026 1.492 - - - - - - - 0.716 0.776 - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
8. JUN ENSGALG00000010870 2764 1.477 - - - - - - 0.763 - 0.714 - Jun proto-oncogene, AP-1 transcription factor subunit [Source:NCBI gene;Acc:424673]
9. BNIP3L ENSGALG00000043405 10316 1.462 - - - - - - 0.710 0.752 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
10. AGPS ENSGALG00000009236 2250 1.459 - - - - - - 0.731 0.728 - - alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
11. MYO5A ENSGALG00000031987 2469 1.458 - - - - - - - 0.708 0.750 - myosin VA [Source:NCBI gene;Acc:396237]
12. SLC25A24 ENSGALG00000001938 3671 1.456 - - - - - - 0.753 0.703 - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
13. ZNF622 ENSGALG00000037171 5706 1.454 - - - - - - 0.718 0.736 - - zinc finger protein 622 [Source:NCBI gene;Acc:373921]
14. EBAG9 ENSGALG00000036293 10058 1.426 - - - - - - 0.712 0.714 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
15. LCLAT1 ENSGALG00000009056 5207 1.408 - - - - - - 0.702 0.706 - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
16. RABEPK ENSGALG00000042210 4492 1.403 - - - - - - 0.702 0.701 - - Rab9 effector protein with kelch motifs [Source:NCBI gene;Acc:772357]
17. RANBP9 ENSGALG00000012696 4871 0.851 - - - - - - - 0.851 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
18. ENSGALG00000007514 ENSGALG00000007514 4866 0.844 - - - - - - - 0.844 - -
19. S100A11 ENSGALG00000036711 23454 0.84 - - - - - - - - 0.840 - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
20. KIAA1462 1612 0.838 - - - - - - - - 0.838 - KIAA1462, transcript variant X4
21. SNCAIP ENSGALG00000005330 2425 0.838 - - - - - - 0.838 - - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
22. PEX14 ENSGALG00000002836 947 0.835 - - - - - - - - 0.835 - peroxisomal biogenesis factor 14 [Source:HGNC Symbol;Acc:HGNC:8856]
23. EMILIN2 ENSGALG00000032997 2460 0.833 - - - - - - 0.833 - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
24. DNM1L ENSGALG00000012929 6174 0.832 - - - - - - - 0.832 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
25. NAP1L1 ENSGALG00000010238 14506 0.829 - - - - - - - - 0.829 - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
26. SH3BGRL ENSGALG00000007128 18708 0.829 - - - - - - - 0.829 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
27. ELOVL6 ENSGALG00000012131 256 0.829 - - - - - - - - 0.829 - ELOVL fatty acid elongase 6 [Source:NCBI gene;Acc:428772]
28. TIMMDC1 ENSGALG00000024480 9337 0.825 - - - - - - - 0.825 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
29. GCHFR ENSGALG00000032239 1608 0.824 - - - - - - - - 0.824 - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
30. APITD1 APITD1 11830 0.823 - - - - - - - 0.823 - -
31. CNFI-A4 CNFI-A4 128 0.822 - - - - - - - - 0.822 -
32. KRT19 ENSGALG00000019719 38711 0.821 - - - - - - - - 0.821 - keratin 19 [Source:NCBI gene;Acc:395861]
33. MICU3 ENSGALG00000013661 1466 0.82 - - - - - - 0.820 - - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
34. YME1L1 ENSGALG00000007492 8652 0.82 - - - - - - - 0.820 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
35. CMTM7 ENSGALG00000011488 1406 0.819 - - - - - - - - 0.819 - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
36. NR0B1 ENSGALG00000016287 481 0.816 - - - - - - - - 0.816 - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
37. SH3BGRL3 ENSGALG00000038536 18187 0.815 - - - - - - 0.815 - - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
38. PRPF6 ENSGALG00000006001 8572 0.815 - - - - - - - 0.815 - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
39. SEC63 ENSGALG00000015308 11596 0.814 - - - - - - 0.814 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
40. BMP5 ENSGALG00000016293 2119 0.813 - - - - - - 0.813 - - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
41. TMBIM1 ENSGALG00000011436 7399 0.811 - - - - - - - 0.811 - - transmembrane BAX inhibitor motif containing 1 [Source:HGNC Symbol;Acc:HGNC:23410]
42. WSB2 ENSGALG00000008151 13246 0.81 - - - - - - - 0.810 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
43. COL4A5 ENSGALG00000008141 15874 0.808 - - - - - - - - 0.808 - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
44. CEP170 ENSGALG00000010733 4177 0.806 - - - - - - - - 0.806 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
45. CFC1 ENSGALG00000012623 3164 0.804 - - - - - - - - 0.804 - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
46. DSP ENSGALG00000012790 17884 0.804 - - - - - - 0.804 - - - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
47. NDUFS5 ENSGALG00000003625 27698 0.803 - - - - - - - 0.803 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
48. RERG ENSGALG00000028186 1124 0.803 - - - - - - 0.803 - - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
49. CDH11 ENSGALG00000039985 18212 0.802 - - - - - - 0.802 - - - cadherin 11 [Source:NCBI gene;Acc:415797]
50. EFHD1 ENSGALG00000001428 2831 0.801 - - - - - - 0.801 - - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
51. ARPC5L ENSGALG00000001014 5642 0.801 - - - - - - 0.801 - - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
52. NLGN4 NLGN4 283 0.799 - - - - - - - - 0.799 -
53. PGM1 ENSGALG00000011016 3391 0.798 - - - - - - 0.798 - - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
54. ZDHHC13 ENSGALG00000004085 1802 0.798 - - - - - - - - 0.798 - zinc finger DHHC-type containing 13 [Source:NCBI gene;Acc:422980]
55. GTF2IRD1 ENSGALG00000001263 14716 0.796 - - - - - - 0.796 - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
56. PEMT ENSGALG00000004875 4094 0.795 - - - - - - - 0.795 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
57. GREB1 ENSGALG00000016455 12794 0.794 - - - - - - - - 0.794 - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
58. SAT1 ENSGALG00000016348 8469 0.794 - - - - - - - 0.794 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
59. PBRM1 ENSGALG00000037455 6450 0.792 - - - - - - - 0.792 - - polybromo 1 [Source:NCBI gene;Acc:396074]
60. GPRC5C ENSGALG00000021362 3712 0.792 - - - - - - 0.792 - - - G protein-coupled receptor class C group 5 member C [Source:HGNC Symbol;Acc:HGNC:13309]
61. NAA20 ENSGALG00000012587 11349 0.791 - - - - - - - 0.791 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
62. C16orf59 C16orf59 1511 0.791 - - - - - - 0.791 - - -
63. EMC3 ENSGALG00000003738 10363 0.79 - - - - - - - 0.790 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
64. PHLDB2 ENSGALG00000015377 8560 0.79 - - - - - - 0.790 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
65. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 0.789 - - - - - - - 0.789 - - homer scaffolding protein 3, transcript variant X4
66. ERLIN2 ENSGALG00000003092 18251 0.789 - - - - - - - 0.789 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
67. TBC1D4 ENSGALG00000016925 2961 0.787 - - - - - - - 0.787 - - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
68. PLEKHB2 ENSGALG00000002169 3832 0.786 - - - - - - 0.786 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
69. MAN2C1 ENSGALG00000001615 2362 0.785 - - - - - - 0.785 - - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
70. PSMD13 ENSGALG00000043684 14720 0.785 - - - - - - - 0.785 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
71. ITGB3BP ENSGALG00000010995 3754 0.785 - - - - - - 0.785 - - - integrin subunit beta 3 binding protein [Source:NCBI gene;Acc:424689]
72. MYL9 ENSGALG00000028567 36256 0.785 - - - - - - 0.785 - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
73. CCDC80 ENSGALG00000015193 1387 0.783 - - - - - - - - 0.783 - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
74. TFDP2 ENSGALG00000025759 13407 0.783 - - - - - - - 0.783 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
75. DCPS ENSGALG00000031143 10191 0.781 - - - - - - - 0.781 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
76. MPRIP ENSGALG00000004798 6700 0.781 - - - - - - - 0.781 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
77. EIF3A ENSGALG00000009328 39982 0.78 - - - - - - - - 0.780 - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
78. FBN2 ENSGALG00000014686 4538 0.779 - - - - - - - - 0.779 - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
79. PHACTR4 ENSGALG00000042485 3523 0.779 - - - - - - - 0.779 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
80. PARD3B ENSGALG00000042645 2893 0.779 - - - - - - - - 0.779 - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
81. NT5DC2 ENSGALG00000035596 27633 0.778 - - 0.778 - - - - - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
82. ARFIP1 ENSGALG00000041361 7351 0.778 - - - - - - - 0.778 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
83. ISCU ENSGALG00000004869 6852 0.778 - - - - - - 0.778 - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
84. FLAD1 ENSGALG00000027700 1606 0.776 - - - - - - 0.776 - - - flavin adenine dinucleotide synthetase 1 [Source:HGNC Symbol;Acc:HGNC:24671]
85. PUF60 ENSGALG00000039901 26902 0.775 - - - - - - - 0.775 - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
86. C1orf198 ENSGALG00000026600 5651 0.773 - - - - - - - 0.773 - - chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
87. SMAD6 ENSGALG00000025898 3144 0.773 - - - - - - 0.773 - - - SMAD family member 6 [Source:NCBI gene;Acc:374096]
88. TST ENSGALG00000012488 5314 0.773 - - - - - - 0.773 - - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
89. SRPK2 ENSGALG00000008154 7385 0.773 - - - - - - 0.773 - - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
90. SEMA4B ENSGALG00000008297 11202 0.771 - - - - - - - 0.771 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
91. H4-I H4-I 2327 0.771 - - - - - - 0.771 - - -
92. NCOR2 ENSGALG00000003120 5322 0.771 - - - - - - - 0.771 - - nuclear receptor corepressor 2 [Source:HGNC Symbol;Acc:HGNC:7673]
93. PPP1R8 ENSGALG00000000729 11797 0.771 - - - - - - - 0.771 - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
94. PITX2 ENSGALG00000042492 20419 0.77 - - - - - - 0.770 - - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
95. CNOT11 ENSGALG00000039563 11251 0.77 - - - - - - - 0.770 - - CCR4-NOT transcription complex subunit 11
96. ARHGAP29 ENSGALG00000005683 3622 0.77 - - - - - - - 0.770 - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
97. SH2D3C ENSGALG00000005036 5101 0.769 - - - - - - - 0.769 - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
98. TNRC18 ENSGALG00000040770 4061 0.769 - - - - - - 0.769 - - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
99. SRSF5 ENSGALG00000009421 8502 0.768 - - - - - - - 0.768 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
100. TMOD1 ENSGALG00000002125 933 0.767 - - - - - - - - 0.767 - tropomodulin 1 [Source:NCBI gene;Acc:395883]

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA