Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHL1

Gene Name Gene ID Reads Annotation
CHL1 ENSGALG00000037856 1565 cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]











Genes with expression patterns similar to CHL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHL1 ENSGALG00000037856 1565 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
2. PTPRZ1 ENSGALG00000040114 3410 3.242 - - - 0.825 0.738 0.930 - - - 0.749 protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
3. ENSGALG00000027373 ENSGALG00000027373 2129 3.227 - - 0.755 0.815 - 0.832 - - - 0.825
4. GDPD4 ENSGALG00000000690 824 2.68 - - - 0.797 - 0.887 0.996 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
5. CRABP-I ENSGALG00000003193 67258 2.519 - - - 0.811 - 0.877 - - - 0.831 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
6. HES5 ENSGALG00000001141 6514 2.398 - - - 0.827 - 0.789 - - - 0.782 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
7. HES6 ENSGALG00000028415 4830 2.307 - - - 0.710 - 0.761 - - - 0.836 hes family bHLH transcription factor 6
8. CERCAM ENSGALG00000004986 5158 2.266 - - - 0.722 - 0.813 - - - 0.731 cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
9. MARCKSL1 ENSGALG00000032335 88728 2.224 - - - 0.707 - 0.815 - - - 0.702 MARCKS like 1 [Source:NCBI gene;Acc:770764]
10. SH3RF3 ENSGALG00000016810 2169 1.731 - - - - - - 0.994 0.737 - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
11. SLC1A3 ENSGALG00000003582 2283 1.648 - - - 0.871 - 0.777 - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
12. NRCAM ENSGALG00000009514 490 1.647 - - - 0.796 - - - - - 0.851 neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
13. NPAS3 ENSGALG00000029022 1950 1.633 - - - - - 0.882 - - - 0.751 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
14. ZIC1 ENSGALG00000040532 6543 1.628 - - - 0.770 - 0.858 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
15. FZD3 ENSGALG00000042308 3356 1.585 - - - - - 0.757 - - - 0.828 frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
16. TAGLN3 ENSGALG00000015379 7865 1.583 - - - 0.754 - - - - - 0.829 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
17. CKB ENSGALG00000011511 2100 1.575 - - - - - 0.861 - - - 0.714 creatine kinase B [Source:NCBI gene;Acc:396248]
18. ENSGALG00000022967 ENSGALG00000022967 240 1.57 - - - - - 0.805 - - - 0.765
19. VIP ENSGALG00000013604 153 1.567 - - - - - 0.806 - 0.761 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
20. DLL1 ENSGALG00000011182 1613 1.543 - - - 0.750 - - - - - 0.793 delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
21. SALL1 ENSGALG00000039238 3740 1.499 - - - 0.794 - - - - - 0.705 spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
22. KIAA1107 1030 1.459 - - - - - 0.730 - - 0.729 - KIAA1107
23. CHGA ENSGALG00000010820 1028 1.458 - - - 0.729 - 0.729 - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
24. ENSGALG00000027002 ENSGALG00000027002 7570 1.457 - - 0.713 - - - - - - 0.744
25. LRRN1 ENSGALG00000035099 684 1.437 - - - 0.726 - 0.711 - - - - leucine rich repeat neuronal 1 [Source:NCBI gene;Acc:771599]
26. CSPG5 ENSGALG00000032184 991 1.437 - - - 0.728 - 0.709 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
27. LUZP2 ENSGALG00000030151 585 0.999 - - - - - - 0.999 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
28. MAPT ENSGALG00000000625 659 0.999 - - - - - - 0.999 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
29. RPUSD4 ENSGALG00000024326 3788 0.999 - - - - - - 0.999 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
30. LHFPL2 ENSGALG00000004437 500 0.999 - - - - - - 0.999 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
31. DNAJC10 ENSGALG00000008862 3114 0.999 - - - - - - 0.999 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
32. LOC425795 ENSGALG00000027696 2357 0.999 - - - - - - 0.999 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
33. CRAC1A CRAC1A 5265 0.999 - - - - - - 0.999 - - -
34. CSDE1 ENSGALG00000002139 1683 0.999 - - - - - - 0.999 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
35. ZNF276 ENSGALG00000000513 2410 0.999 - - - - - - 0.999 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
36. ATPAF2 ENSGALG00000004926 3393 0.999 - - - - - - 0.999 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
37. gga-mir-1723 ENSGALG00000025386 6662 0.998 - - - - - - 0.998 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
38. SAV1 ENSGALG00000012341 3313 0.998 - - - - - - 0.998 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
39. LYVE1 ENSGALG00000005643 1230 0.998 - - - - - - 0.998 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
40. SNAPIN ENSGALG00000026796 11155 0.998 - - - - - - 0.998 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
41. DIS3 ENSGALG00000016930 3696 0.998 - - - - - - 0.998 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
42. GLT8D1 ENSGALG00000001642 4232 0.997 - - - - - - 0.997 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
43. ENSGALG00000006730 ENSGALG00000006730 3695 0.997 - - - - - - 0.997 - - -
44. C6H10ORF32 C6H10ORF32 7694 0.997 - - - - - - 0.997 - - -
45. GALNTL4 GALNTL4 3548 0.996 - - - - - - 0.996 - - -
46. MMADHC ENSGALG00000012473 9026 0.996 - - - - - - 0.996 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
47. CCDC90B ENSGALG00000037072 5088 0.996 - - - - - - 0.996 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
48. GCAT ENSGALG00000012312 7906 0.996 - - - - - - 0.996 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
49. TTF1 4214 0.995 - - - - - - 0.995 - - - transcription termination factor 1
50. PRKG1 ENSGALG00000003805 4654 0.995 - - - - - - 0.995 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
51. GSDMA ENSGALG00000013495 1650 0.995 - - - - - - 0.995 - - - gasdermin A [Source:NCBI gene;Acc:426132]
52. APITD1 APITD1 11830 0.994 - - - - - - 0.994 - - -
53. LOC424109 ENSGALG00000008738 3932 0.994 - - - - - - 0.994 - - - alpha-aspartyl dipeptidase
54. COMMD8 ENSGALG00000026279 13509 0.992 - - - - - - 0.992 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
55. POLR2C ENSGALG00000001168 10703 0.992 - - - - - - 0.992 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
56. MYBL2 ENSGALG00000003503 15875 0.992 - - - - - - 0.992 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
57. USO1 ENSGALG00000010878 9506 0.991 - - - - - - 0.991 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
58. FHL3 ENSGALG00000035187 9753 0.99 - - - - - - 0.990 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
59. SPINT1 ENSGALG00000008469 5735 0.99 - - - - - - 0.990 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
60. PSMD13 ENSGALG00000043684 14720 0.989 - - - - - - 0.989 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
61. CTNNBL1 ENSGALG00000006817 6765 0.989 - - - - - - 0.989 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
62. CCAR1 ENSGALG00000004108 13219 0.989 - - - - - - 0.989 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
63. SERBP1 ENSGALG00000011229 30489 0.988 - - - - - - 0.988 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
64. NOB1 ENSGALG00000000693 15442 0.987 - - - - - - 0.987 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
65. TP53INP1 ENSGALG00000041353 6890 0.986 - - - - - - 0.986 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
66. PPP3CB ENSGALG00000005243 8794 0.984 - - - - - - 0.984 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
67. FGD5 ENSGALG00000008546 4031 0.984 - - - - - - 0.984 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
68. ANLN 10479 0.984 - - - - - - 0.984 - - - anillin actin binding protein, transcript variant X2
69. EPHA3 ENSGALG00000015403 9811 0.983 - - - - - - 0.983 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
70. POLB ENSGALG00000040828 7462 0.981 - - - - - - 0.981 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
71. RNF13 ENSGALG00000010411 8749 0.981 - - - - - - 0.981 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
72. CNBP 42704 0.98 - - - - - - 0.980 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
73. ACTR6 ENSGALG00000040976 31271 0.979 - - - - - - 0.979 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
74. MRPS15 ENSGALG00000044433 15356 0.979 - - - - - - 0.979 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
75. CDC5L ENSGALG00000016704 22893 0.978 - - - - - - 0.978 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
76. ABRACL ENSGALG00000013826 19445 0.978 - - - - - - 0.978 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
77. MRPS34 ENSGALG00000001792 14262 0.976 - - - - - - 0.976 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
78. MRPS36 ENSGALG00000014789 7584 0.975 - - - - - - 0.975 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
79. MOB4 ENSGALG00000008128 10322 0.972 - - - - - - 0.972 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
80. RPF1 ENSGALG00000008796 9809 0.969 - - - - - - 0.969 - - - ribosome production factor 1 homolog
81. MED1 ENSGALG00000001708 9556 0.968 - - - - - - 0.968 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
82. TRIB2 ENSGALG00000016457 17641 0.964 - - - - - - 0.964 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
83. ENSGALG00000013825 ENSGALG00000013825 16473 0.959 - - - - - - 0.959 - - -
84. EXOSC7 ENSGALG00000030084 8654 0.956 - - - - - - 0.956 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
85. EZH2 ENSGALG00000043399 15881 0.952 - - - - - - 0.952 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
86. PELI1 ENSGALG00000008837 11561 0.952 - - - - - - 0.952 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
87. MRPS26 ENSGALG00000014118 27422 0.949 - - - - - - 0.949 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
88. CCT5 ENSGALG00000013041 56190 0.948 - - - - - - 0.948 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
89. SNX17 ENSGALG00000032468 13519 0.947 - - - - - - 0.947 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
90. TAF12 ENSGALG00000000991 8709 0.947 - - - - - - 0.947 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
91. LOC407092 ENSGALG00000013809 10706 0.945 - - - - - - 0.945 - - - AD012Z, transcript variant X5
92. STAG2 ENSGALG00000008482 13629 0.943 - - - - - - 0.943 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
93. BUB3 ENSGALG00000009681 36055 0.941 - - - - - - 0.941 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
94. ZDHHC6 ENSGALG00000008870 16575 0.941 - - - - - - 0.941 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
95. TPI1 ENSGALG00000014526 43273 0.938 - - - - - - 0.938 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
96. VDAC3 ENSGALG00000041463 21595 0.937 - - - - - - 0.937 - - - voltage dependent anion channel 3, transcript variant X9
97. TBL1X ENSGALG00000040006 28597 0.937 - - - - - - 0.937 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
98. DDX18 ENSGALG00000012147 12463 0.936 - - - - - - 0.936 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
99. ENSGALG00000000360 ENSGALG00000000360 15320 0.93 - - - - - - 0.930 - - -
100. PRDX1 ENSGALG00000010243 151918 0.925 - - - - - - 0.925 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA