Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHCHD4

Gene Name Gene ID Reads Annotation
CHCHD4 ENSGALG00000006328 5860 coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]











Genes with expression patterns similar to CHCHD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHCHD4 ENSGALG00000006328 5860 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
2. C1H21ORF91 ENSGALG00000028290 5550 1.697 - - - - - - 0.876 0.821 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
3. IPO11 ENSGALG00000014740 4922 1.676 - - - - - - 0.892 0.784 - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
4. CDK5RAP2 ENSGALG00000041102 4042 1.675 - - - - - - 0.866 0.809 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
5. NIP7 ENSGALG00000000650 23932 1.663 - - - - - - 0.827 0.836 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
6. UTP18 ENSGALG00000002985 7129 1.66 - - - - - - 0.882 0.778 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
7. ACP1 ENSGALG00000016363 10636 1.659 - - - - - - 0.863 0.796 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
8. NCBP2_1 ENSGALG00000006843 7170 1.636 - - - - - - 0.918 0.718 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
9. VPS4B ENSGALG00000012879 6720 1.629 - - - - - - 0.829 0.800 - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
10. DPY30 ENSGALG00000010621 6818 1.624 - - - - - - 0.885 0.739 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
11. CHDZ CHDZ 10381 1.612 - - - - - - 0.836 0.776 - -
12. BDH1_1 ENSGALG00000023601 6109 1.589 - - 0.709 - - - 0.880 - - - 3-hydroxybutyrate dehydrogenase, type 1
13. PISD ENSGALG00000006872 3539 1.588 - - - - - - 0.861 0.727 - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
14. MKRN1 ENSGALG00000012852 6907 1.586 - - - - - - 0.869 0.717 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
15. SKA3 ENSGALG00000017128 4176 1.585 - - - - - - 0.866 0.719 - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
16. DHCR7 ENSGALG00000004106 4731 1.579 - - 0.721 - - - 0.858 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
17. XPC ENSGALG00000006357 2484 1.568 - - 0.703 - - - 0.865 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
18. TRAF3IP1 ENSGALG00000004236 7094 1.556 - - - - - - 0.841 0.715 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
19. MRPS27 ENSGALG00000015002 6541 1.554 - - 0.736 - - - - 0.818 - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
20. EMC3 ENSGALG00000003738 10363 1.54 - - - - - - 0.824 0.716 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
21. TBP ENSGALG00000011171 5759 1.535 - - - - - - 0.807 0.728 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
22. DBI ENSGALG00000012112 6910 1.533 - - 0.815 - - - - 0.718 - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
23. PCBP4 ENSGALG00000027695 7937 1.525 - - - - - - 0.822 0.703 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
24. PLOD1 ENSGALG00000004531 8256 0.951 - - - - - - 0.951 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
25. IST1 ENSGALG00000000811 10527 0.95 - - - - - - 0.950 - - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
26. AIMP1 ENSGALG00000010553 17994 0.946 - - - - - - 0.946 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
27. RAB5A ENSGALG00000011272 17767 0.943 - - - - - - 0.943 - - - RAB5A, member RAS oncogene family [Source:NCBI gene;Acc:420649]
28. ASB3 ENSGALG00000008176 5422 0.942 - - - - - - 0.942 - - - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
29. PAFAH1B1 ENSGALG00000005834 23532 0.935 - - - - - - 0.935 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
30. ODC1 ENSGALG00000016444 20119 0.933 - - - - - - 0.933 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
31. MPHOSPH10 ENSGALG00000003906 7029 0.93 - - - - - - 0.930 - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
32. RNF130 ENSGALG00000005820 13797 0.93 - - - - - - 0.930 - - - ring finger protein 130 [Source:HGNC Symbol;Acc:HGNC:18280]
33. ADD3 ENSGALG00000008542 13814 0.928 - - - - - - 0.928 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
34. SKIV2L2 ENSGALG00000014709 2926 0.924 - - - - - - 0.924 - - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
35. TRIP11 ENSGALG00000010763 3146 0.918 - - - - - - 0.918 - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
36. MKI67 ENSGALG00000025996 28136 0.916 - - - - - - 0.916 - - - marker of proliferation Ki-67, transcript variant X3
37. ZRANB2 ENSGALG00000011340 18994 0.908 - - - - - - 0.908 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
38. RBM25 ENSGALG00000009332 10842 0.907 - - - - - - 0.907 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
39. WDR36 ENSGALG00000000247 11277 0.905 - - - - - - 0.905 - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
40. CWC22 ENSGALG00000009001 5984 0.905 - - - - - - 0.905 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
41. NECAP2 ENSGALG00000003745 4899 0.904 - - - - - - 0.904 - - - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
42. IAH1 ENSGALG00000016425 11163 0.904 - - - - - - 0.904 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:NCBI gene;Acc:421930]
43. MRTO4 ENSGALG00000003991 13642 0.904 - - - - - - 0.904 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
44. C2orf47 C2orf47 17769 0.902 - - - - - - 0.902 - - -
45. FUBP3 ENSGALG00000003941 12667 0.9 - - - - - - 0.900 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
46. ACTL6A ENSGALG00000009061 13013 0.899 - - - - - - 0.899 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
47. DESI2 ENSGALG00000010678 4590 0.894 - - - - - - 0.894 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
48. XPO6 ENSGALG00000035360 7042 0.893 - - - - - - 0.893 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
49. PAXBP1 ENSGALG00000036833 5573 0.891 - - - - - - 0.891 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
50. SRP14 ENSGALG00000009592 17828 0.89 - - - - - - 0.890 - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
51. CKLF ENSGALG00000005254 3365 0.887 - - - - - - 0.887 - - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
52. BOD1L1 ENSGALG00000026470 9250 0.887 - - - - - - 0.887 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
53. LGR5 ENSGALG00000010163 2931 0.886 - - - - - - 0.886 - - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
54. MRPL18 ENSGALG00000011625 7855 0.885 - - - - - - 0.885 - - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
55. WDR5 ENSGALG00000002659 13008 0.884 - - - - - - 0.884 - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
56. MRPS6 ENSGALG00000027579 8225 0.884 - - - - - - 0.884 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
57. NOC3L ENSGALG00000035667 7441 0.883 - - - - - - 0.883 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
58. HAT1 ENSGALG00000009525 24864 0.883 - - - - - - 0.883 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
59. ACOT7 ENSGALG00000000652 7976 0.883 - - - - - - 0.883 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
60. SLC4A3 ENSGALG00000011224 2161 0.882 - - - - - - 0.882 - - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
61. YAF2 ENSGALG00000009540 8452 0.881 - - - - - - 0.881 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
62. NDUFS3 ENSGALG00000008084 12471 0.881 - - - - - - 0.881 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
63. SLC35B1 ENSGALG00000035057 10683 0.88 - - - - - - 0.880 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
64. MNAT1 ENSGALG00000011910 6809 0.88 - - - - - - 0.880 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
65. STOML2 STOML2 15566 0.88 - - - - - - 0.880 - - -
66. DAK DAK 13208 0.88 - - - - - - 0.880 - - -
67. PEX3 ENSGALG00000013777 3158 0.88 - - - - - - 0.880 - - - peroxisomal biogenesis factor 3
68. LAMTOR2 ENSGALG00000029881 35356 0.88 - - - - - - 0.880 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
69. CHCHD10 ENSGALG00000028810 10389 0.877 - - - - - - 0.877 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
70. LRIG2 ENSGALG00000001733 2980 0.877 - - - - - - 0.877 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
71. BIRC5 ENSGALG00000008713 46856 0.876 - - - - - - 0.876 - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
72. CWF19L2 ENSGALG00000017171 4590 0.875 - - - - - - 0.875 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
73. TMEM128 ENSGALG00000014992 6567 0.874 - - - - - - 0.874 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
74. ZBTB18 ENSGALG00000010705 3433 0.873 - - - - - - 0.873 - - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
75. ZCCHC10 ENSGALG00000036666 5148 0.873 - - - - - - 0.873 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
76. GPATCH1 ENSGALG00000004839 6455 0.873 - - - - - - 0.873 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
77. ZFX ENSGALG00000016327 5470 0.872 - - - - - - 0.872 - - - zinc finger protein, X-linked, transcript variant X4
78. TMEM47 ENSGALG00000027198 3619 0.872 - - - - - - 0.872 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
79. FNTA ENSGALG00000015397 3741 0.871 - - - - - - 0.871 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
80. LOC427439 ENSGALG00000003605 9312 0.871 - - - - - - 0.871 - - - Nipped-B homolog-like, transcript variant X1
81. ACTR3 ENSGALG00000012159 16020 0.87 - - - - - - 0.870 - - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
82. METTL16 ENSGALG00000014901 3720 0.87 - - - - - - 0.870 - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
83. PDCD11 ENSGALG00000008265 8665 0.87 - - - - - - 0.870 - - - programmed cell death 11, transcript variant X2
84. JUP ENSGALG00000017414 6920 0.87 - - - - - - 0.870 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
85. ZNF335 ENSGALG00000041370 4740 0.87 - - - - - - 0.870 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
86. EPRS ENSGALG00000009598 26412 0.869 - - - - - - 0.869 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
87. SON ENSGALG00000035096 8654 0.869 - - - - - - 0.869 - - - SON DNA binding protein, transcript variant X4
88. PPA1 ENSGALG00000004442 33355 0.869 - - - - - - 0.869 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
89. FAM172A ENSGALG00000014661 10565 0.869 - - - - - - 0.869 - - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
90. GINS1 ENSGALG00000008538 4786 0.868 - - - - - - 0.868 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
91. DLC1 ENSGALG00000013715 5297 0.868 - - - - - - 0.868 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
92. COX7A2 ENSGALG00000015906 62347 0.867 - - - - - - 0.867 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
93. CCDC104 CCDC104 6584 0.867 - - - - - - 0.867 - - -
94. MRPS23 ENSGALG00000005559 10360 0.867 - - - - - - 0.867 - - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
95. SPCS1 ENSGALG00000001655 7718 0.867 - - - - - - - 0.867 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
96. CCDC43 ENSGALG00000001022 5462 0.866 - - - - - - 0.866 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
97. PARP16 ENSGALG00000007365 9467 0.865 - - - - - - 0.865 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
98. TCF25 ENSGALG00000000129 7587 0.865 - - - - - - 0.865 - - - transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
99. ENSGALG00000006671 ENSGALG00000006671 4194 0.865 - - - - - - 0.865 - - -
100. WBP4 ENSGALG00000016949 5858 0.864 - - - - - - 0.864 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]

There are 448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA