Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CHAT

Gene Name Gene ID Reads Annotation
CHAT ENSGALG00000002289 26 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]











Genes with expression patterns similar to CHAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CHAT ENSGALG00000002289 26 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
2. CLDN16 ENSGALG00000025821 14 2 - - 1.000 - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
3. FAT2 ENSGALG00000004320 4 2 - - - - - 1.000 - 1.000 - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
4. TEX33 ENSGALG00000012490 11 2 - - - - - 1.000 - 1.000 - - testis expressed 33, transcript variant X2
5. ENSGALG00000028402 ENSGALG00000028402 5 1.987 - - 0.987 - - - - 1.000 - -
6. SNORD100 SNORD100 270 1.97 - - - - 1.000 - - 0.970 - -
7. LRRC32 9 1.957 - - 0.957 - - - - 1.000 - - leucine rich repeat containing 32
8. TNFRSF18 ENSGALG00000001882 12 1.892 - - - - - 0.892 - 1.000 - - TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
9. RAB43 ENSGALG00000005021 5 1.877 - - - - 0.877 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
10. PSEN2 ENSGALG00000009073 7 1.839 - - - - - 1.000 - 0.839 - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
11. QSOX1 ENSGALG00000003933 184 1.813 - - - - - 1.000 - - - 0.813 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
12. ARL15 ENSGALG00000014911 13 1.801 - - - - 1.000 - - - - 0.801 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. FBXL4 ENSGALG00000015490 12 1.787 - - - - 1.000 - - - - 0.787 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
14. SNTG2 ENSGALG00000016367 42 1.759 - - - - - - - 0.970 - 0.789 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
15. SNORD61 SNORD61 12 1.748 - - 0.748 - - 1.000 - - - -
16. SULT ENSGALG00000011287 62 1.563 - - 0.759 - - 0.804 - - - - sulfotransferase [Source:NCBI gene;Acc:395933]
17. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
18. VWA3A 6 1 - - - - - - - 1.000 - - von Willebrand factor A domain containing 3A, transcript variant X4
19. TLL2 ENSGALG00000005519 10 1 - - - - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
20. A1CF ENSGALG00000003765 36 1 - - 1.000 - - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
21. CCDC69 2 1 - - - - - - - 1.000 - - coiled-coil domain containing 69
22. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
23. EMID1 4 1 - - - - 1.000 - - - - - EMI domain containing 1, transcript variant X5
24. TRHDE ENSGALG00000010200 4 1 - - - - 1.000 - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
25. CAPS2 ENSGALG00000010208 0 1 - - - - - - - 1.000 - - calcyphosine 2 [Source:HGNC Symbol;Acc:HGNC:16471]
26. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
27. WDR72 ENSGALG00000004545 5 1 - - 1.000 - - - - - - - WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
28. ATP6V1AL ENSGALG00000000048 21 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
29. HRG ENSGALG00000008646 1 1 - - 1.000 - - - - - - - histidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]
30. 5S 5S 0 1 - - - - - 1.000 - - - -
31. ENSGALG00000028156 ENSGALG00000028156 1 1 - - 1.000 - - - - - - -
32. CYP19A1 ENSGALG00000013294 0 1 - - - - - - - 1.000 - - cytochrome P450 family 19 subfamily A member 1 [Source:NCBI gene;Acc:414854]
33. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
34. HEPACAM2 ENSGALG00000009482 3 1 - - - - 1.000 - - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
35. BDKRB2 ENSGALG00000011080 12 1 - - 1.000 - - - - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
36. TRAF2 ENSGALG00000042838 24 1 - - - - 1.000 - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
37. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
38. PTPRB ENSGALG00000010049 15 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type B [Source:HGNC Symbol;Acc:HGNC:9665]
39. HDC ENSGALG00000023436 3 1 - - - - 1.000 - - - - - histidine decarboxylase [Source:NCBI gene;Acc:415454]
40. LRRC63 8 1 - - - - - - - 1.000 - - leucine rich repeat containing 63, transcript variant X3
41. MST1R ENSGALG00000003103 11 1 - - - - - - - 1.000 - - macrophage stimulating 1 receptor [Source:NCBI gene;Acc:427573]
42. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
43. TSNAXIP1 ENSGALG00000001533 9 1 - - - - 1.000 - - - - - translin associated factor X interacting protein 1, transcript variant X2
44. ENSGALG00000009237 ENSGALG00000009237 3 1 - - 1.000 - - - - - - -
45. LRRTM4 ENSGALG00000000476 0 1 - - - - - - - 1.000 - - leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:HGNC:19411]
46. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
47. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
48. GRAP2 ENSGALG00000012056 16 1 - - - - - - - 1.000 - - GRB2-related adaptor protein 2, transcript variant X3
49. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
50. TYR ENSGALG00000017237 4 1 - - - - - - - 1.000 - - tyrosinase [Source:NCBI gene;Acc:373971]
51. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
52. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
53. HOXB1 ENSGALG00000013454 9 1 - - - - 1.000 - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
54. GRHL2 ENSGALG00000037687 3 1 - - - - 1.000 - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
55. CCDC178 6 1 - - - - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
56. TESK2 ENSGALG00000010230 9 1 - - - - 1.000 - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
57. OXGR1 ENSGALG00000016891 13 1 - - - - - - - 1.000 - - oxoglutarate receptor 1
58. PLEKHM2 ENSGALG00000003439 44 1 - - - - - - - 1.000 - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
59. ACTL10 ACTL10 3 1 - - 1.000 - - - - - - -
60. F7 ENSGALG00000016833 4 1 - - 1.000 - - - - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
61. C2CD3 ENSGALG00000017314 13 1 - - - - 1.000 - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
62. ENSGALG00000023704 ENSGALG00000023704 2 1 - - - - - - - 1.000 - -
63. POMT2 ENSGALG00000041962 1 1 - - - - 1.000 - - - - - protein O-mannosyltransferase 2, transcript variant X7
64. LOC100858814 ENSGALG00000028210 3 1 - - - - - - - 1.000 - - adenine phosphoribosyltransferase-like, transcript variant X1
65. GRPR ENSGALG00000027960 22 1 - - - - - - - 1.000 - - gastrin releasing peptide receptor [Source:NCBI gene;Acc:378928]
66. B4GALT2 ENSGALG00000010094 36 1 - - - - - - - 1.000 - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
67. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
68. OTOR ENSGALG00000008732 10 1 - - 1.000 - - - - - - - otoraplin [Source:NCBI gene;Acc:395484]
69. EPHB6 ENSGALG00000014749 30 1 - - - - 1.000 - - - - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
70. BTBD6 ENSGALG00000033813 163 1 - - - - - - - 1.000 - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
71. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
72. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
73. ENSGALG00000023695 ENSGALG00000023695 2 1 - - 1.000 - - - - - - -
74. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
75. SYTL2L ENSGALG00000008326 5 1 - - - - 1.000 - - - - - synaptotagmin-like protein 2-like, transcript variant X4
76. ST8SIA5 ENSGALG00000035927 4 1 - - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
77. RXFP1 ENSGALG00000009429 10 1 - - - - 1.000 - - - - - relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
78. ACSL6 ENSGALG00000006644 5 1 - - - - 1.000 - - - - - acyl-CoA synthetase long-chain family member 6, transcript variant X3
79. ENSGALG00000023638 ENSGALG00000023638 16 1 - - - - - 1.000 - - - -
80. MINPP1 ENSGALG00000003695 1 1 - - - - - - - 1.000 - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
81. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]
82. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
83. CASS4 ENSGALG00000007744 10 1 - - - - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
84. AKAP14 26 1 - - - - 1.000 - - - - - A-kinase anchoring protein 14, transcript variant X1
85. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
86. STAG3 STAG3 34 1 - - - - - - - 1.000 - -
87. LAPTM5 ENSGALG00000038636 18 1 - - - - - - - 1.000 - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
88. CDHR4 2 1 - - - - 1.000 - - - - - cadherin related family member 4
89. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
90. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
91. ALC ENSGALG00000040392 282 1 - - - - - - - 1.000 - - ALC protein [Source:NCBI gene;Acc:395084]
92. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
93. ASPR ASPR 1 1 - - - - - 1.000 - - - -
94. PCDH19 ENSGALG00000006822 13 1 - - - - 1.000 - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
95. ENSGALG00000023869 ENSGALG00000023869 1 1 - - 1.000 - - - - - - -
96. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
97. TRPV2 ENSGALG00000004519 7 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
98. CLEC19A ENSGALG00000030546 8 1 - - - - - - - 1.000 - - C-type lectin domain containing 19A [Source:HGNC Symbol;Acc:HGNC:34522]
99. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
100. ABCA4 ENSGALG00000005752 15 1 - - 1.000 - - - - - - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]

There are 298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA