Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CDC42

Gene Name Gene ID Reads Annotation
CDC42 ENSGALG00000004796 59878 cell division cycle 42 [Source:NCBI gene;Acc:395917]











Genes with expression patterns similar to CDC42

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CDC42 ENSGALG00000004796 59878 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell division cycle 42 [Source:NCBI gene;Acc:395917]
2. ELL2 ENSGALG00000014678 1111 1.772 - - - - 0.921 - - - - 0.851 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
3. C28H19ORF10 C28H19ORF10 16529 1.732 - - - - - - 0.913 - - 0.819
4. FERMT2 ENSGALG00000012425 5480 1.63 - - - - 0.920 - - - - 0.710 fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
5. APP ENSGALG00000015770 9438 1.628 - - - - - - 0.896 - - 0.732 amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
6. CEP70 ENSGALG00000012087 7992 1.584 - - - - 0.806 - - - - 0.778 centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
7. CLPTM1L ENSGALG00000013187 9733 1.437 - 0.710 - - - - - - - 0.727 CLPTM1 like [Source:NCBI gene;Acc:420973]
8. NDUFA10 ENSGALG00000004302 41948 0.947 - - - - - - 0.947 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
9. LSM7 ENSGALG00000000408 19112 0.936 - - - - - - 0.936 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
10. YY1 ENSGALG00000017388 1933 0.931 - - - - 0.931 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
11. BZW2 ENSGALG00000010809 29213 0.93 - - - - - - 0.930 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
12. FH ENSGALG00000013165 13669 0.927 - - - - 0.927 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
13. SH2D3C ENSGALG00000005036 5101 0.927 - - - - 0.927 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
14. STK3 ENSGALG00000032850 6339 0.927 - - - - 0.927 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
15. POLR2B ENSGALG00000011387 4864 0.925 - - - - 0.925 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
16. MKI67 ENSGALG00000025996 28136 0.924 - - - - 0.924 - - - - - marker of proliferation Ki-67, transcript variant X3
17. DNAJC12 ENSGALG00000002769 1418 0.924 - - - - 0.924 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
18. DDOST ENSGALG00000010073 18707 0.923 - - - - - - 0.923 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
19. SSPN ENSGALG00000014042 638 0.923 - - - - 0.923 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
20. ENSGALG00000011687 ENSGALG00000011687 4553 0.923 - - - - 0.923 - - - - -
21. REST 2394 0.922 - - - - 0.922 - - - - - RE1 silencing transcription factor
22. DDX55 ENSGALG00000003298 2315 0.922 - - - - 0.922 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
23. RFWD3 2315 0.922 - - - - - - - - - 0.922 ring finger and WD repeat domain 3
24. IGF1R ENSGALG00000040651 772 0.922 - - - - 0.922 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
25. POLR3F ENSGALG00000008749 5645 0.922 - - - - 0.922 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
26. CTSZ ENSGALG00000007462 630 0.922 - - - - 0.922 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
27. PLAA ENSGALG00000001782 5459 0.921 - - - - 0.921 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
28. C1D ENSGALG00000008765 14779 0.921 - - - - - - 0.921 - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
29. RABEP1 ENSGALG00000001737 2650 0.921 - - - - 0.921 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
30. XPO7 ENSGALG00000001838 1875 0.921 - - - - 0.921 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
31. AATF ENSGALG00000005420 6501 0.92 - - - - 0.920 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
32. PTTG1 17936 0.918 - - - - 0.918 - - - - - pituitary tumor-transforming 1, transcript variant X1
33. KNOP1 ENSGALG00000002042 6251 0.918 - - - - 0.918 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
34. DDX1 ENSGALG00000016461 15157 0.918 - - - - - - 0.918 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
35. ZBTB10 ENSGALG00000034376 3271 0.918 - - - - 0.918 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
36. CZH9ORF41 CZH9ORF41 3492 0.917 - - - - 0.917 - - - - -
37. COPS4 ENSGALG00000011130 21515 0.917 - - - - 0.917 - - - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
38. GPN3 ENSGALG00000003807 6320 0.917 - - - - 0.917 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
39. EAPP ENSGALG00000010007 5080 0.917 - - - - 0.917 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
40. FBXO9 ENSGALG00000016320 9600 0.917 - - - - 0.917 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
41. TMEM165 ENSGALG00000027886 5468 0.917 - - - - 0.917 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
42. UTP15 ENSGALG00000013510 13122 0.917 - - - - - - 0.917 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
43. NUDCD2 ENSGALG00000001726 6303 0.917 - - - - - - 0.917 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
44. PLOD2 ENSGALG00000006783 22789 0.916 - - - - - - 0.916 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
45. SIRT1 ENSGALG00000002761 9028 0.916 - - - - 0.916 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
46. PTPN12 9302 0.916 - - - - 0.916 - - - - - protein tyrosine phosphatase, non-receptor type 12
47. TCP11L1 ENSGALG00000011688 2427 0.916 - - - - 0.916 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
48. BAG4 ENSGALG00000003254 5751 0.916 - - - - 0.916 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
49. MRPS27 ENSGALG00000015002 6541 0.916 - - - - 0.916 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
50. TLCD1 ENSGALG00000003973 17569 0.915 - - - - 0.915 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
51. CBWD1 ENSGALG00000010147 2765 0.915 - - - - 0.915 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
52. CDC42SE2 ENSGALG00000027258 4725 0.915 - - - - 0.915 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
53. RAB12 ENSGALG00000033608 14160 0.914 - - - - 0.914 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
54. ATG5 ENSGALG00000015387 7752 0.914 - - - - 0.914 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
55. RALBP1 ENSGALG00000008405 13780 0.914 - - - - - - 0.914 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
56. TRAPPC12 ENSGALG00000016387 2593 0.913 - - - - 0.913 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
57. SSR2 ENSGALG00000000764 32190 0.913 - - - - 0.913 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
58. TLK2 ENSGALG00000000410 4690 0.912 - - - - 0.912 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
59. COMMD8 ENSGALG00000026279 13509 0.912 - - - - 0.912 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
60. COIL ENSGALG00000003158 7806 0.911 - - - - 0.911 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
61. WDR82 ENSGALG00000025904 4783 0.911 - - - - 0.911 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
62. REEP5 ENSGALG00000023157 6282 0.911 - - - - 0.911 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
63. SHROOM2 ENSGALG00000030802 4517 0.911 - - - - 0.911 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
64. IGBP1 ENSGALG00000044628 9200 0.911 - - - - 0.911 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
65. MRPS25 ENSGALG00000008506 12131 0.911 - - - - 0.911 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
66. NAP1L1 ENSGALG00000010238 14506 0.91 - - - - 0.910 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
67. RCAN3 ENSGALG00000004282 7778 0.909 - - - - 0.909 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
68. THOC5 ENSGALG00000029223 16069 0.909 - - - - - - 0.909 - - - THO complex 5 [Source:NCBI gene;Acc:417019]
69. RBM18 ENSGALG00000028167 10372 0.909 - - - - - - 0.909 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
70. LATS2 4776 0.908 - - - - 0.908 - - - - - large tumor suppressor kinase 2
71. CSNK1G1 ENSGALG00000030812 31618 0.908 - - - - 0.908 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
72. NOP58 ENSGALG00000008454 34630 0.908 - - - - 0.908 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
73. DEPDC1B ENSGALG00000014729 5334 0.908 - - - - - - 0.908 - - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
74. CHKA ENSGALG00000036754 5077 0.907 - - - - - - 0.907 - - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
75. YWHAE ENSGALG00000002661 37143 0.906 - - - - - - 0.906 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
76. HSD17B12 ENSGALG00000036787 11748 0.905 - - - - - - 0.905 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
77. DRAXIN ENSGALG00000004631 3122 0.905 - - - - 0.905 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
78. IGDCC4 ENSGALG00000007410 5457 0.905 - - - - 0.905 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
79. RNF7 ENSGALG00000021117 13110 0.904 - - - - - - 0.904 - - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
80. EXO1 ENSGALG00000010748 7572 0.904 - - - - 0.904 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
81. NAA25 ENSGALG00000041821 12729 0.904 - - - - 0.904 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
82. RPL24 ENSGALG00000015339 227460 0.903 - - - - 0.903 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
83. RBM45 ENSGALG00000009202 6057 0.903 - - - - - - 0.903 - - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
84. MRPL23 ENSGALG00000006561 13737 0.903 - - - - 0.903 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
85. HECTD3 ENSGALG00000010217 2513 0.902 - - - - - - 0.902 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
86. SLBP ENSGALG00000015712 5586 0.901 - - - - - - 0.901 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
87. IRF6 ENSGALG00000001405 3144 0.901 - - - - - - 0.901 - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
88. CKAP2 ENSGALG00000017025 25020 0.901 - - - - - - 0.901 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
89. SAR1B ENSGALG00000038753 6493 0.9 - - - - 0.900 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
90. CHCHD2 ENSGALG00000002495 99536 0.899 - - - - 0.899 - - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
91. STRAP ENSGALG00000013092 13100 0.899 - - - - 0.899 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
92. TOPBP1 ENSGALG00000034461 3094 0.898 - - - - - - 0.898 - - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
93. SMPD3 ENSGALG00000034950 4335 0.898 - - - - - - 0.898 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
94. UGCG ENSGALG00000015682 2735 0.897 - - - - - - 0.897 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
95. SKP2 ENSGALG00000003547 14637 0.897 - - - - 0.897 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
96. ENSGALG00000014852 ENSGALG00000014852 15288 0.896 - - - - 0.896 - - - - -
97. GATAD2A ENSGALG00000042900 6337 0.895 - - - - - - 0.895 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
98. NFASC ENSGALG00000031776 4264 0.894 - - - - 0.894 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
99. GALT ENSGALG00000026195 2002 0.894 - - - - - - 0.894 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
100. PUM1 ENSGALG00000042598 9392 0.894 - - - - 0.894 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]

There are 378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA