Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCNB3

Gene Name Gene ID Reads Annotation
CCNB3 ENSGALG00000025810 2115 cyclin B3 [Source:NCBI gene;Acc:396167]











Genes with expression patterns similar to CCNB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CCNB3 ENSGALG00000025810 2115 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin B3 [Source:NCBI gene;Acc:396167]
2. PDCD4 ENSGALG00000008700 574 1.686 - - 0.911 - - - - - - 0.775 programmed cell death 4 [Source:NCBI gene;Acc:374191]
3. ATP2B2 ENSGALG00000030908 584 1.645 - - 0.875 - - - - - - 0.770 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
4. PCMTD2 ENSGALG00000005901 1833 1.616 - - 0.858 - - - - - - 0.758 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
5. ENSGALG00000023180 ENSGALG00000023180 83 1.602 - - 0.901 0.701 - - - - - -
6. DLX5 ENSGALG00000009129 1395 1.589 - - 0.878 - - - - - - 0.711 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
7. PHF2 ENSGALG00000039208 2003 1.582 - - 0.791 - - - - - - 0.791 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
8. RASSF8 ENSGALG00000014041 850 1.552 - - 0.823 - - - - - - 0.729 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
9. ARHGAP11A ENSGALG00000009731 6817 1.547 - - 0.764 - - - - - - 0.783 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
10. RGP1 ENSGALG00000002394 5937 1.517 - - 0.765 - - - - - - 0.752 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
11. AK6 ENSGALG00000020534 4791 1.516 - - 0.760 - - - - - - 0.756 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
12. MORN4 ENSGALG00000006149 7772 1.51 - - 0.772 - - - - - - 0.738 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
13. PTPN11 ENSGALG00000004821 2658 1.494 - - 0.744 - - - - - - 0.750 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
14. RNF220 ENSGALG00000010109 3114 1.481 - - 0.721 - - - - - - 0.760 ring finger protein 220 [Source:NCBI gene;Acc:424580]
15. RAB34 ENSGALG00000026315 1193 1.48 - - 0.725 - - - - - - 0.755 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
16. MASP1 ENSGALG00000007419 141 1.478 - - - 0.736 - - - - - 0.742 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
17. PTCHD1 ENSGALG00000016358 3882 1.431 - - 0.730 - - - - - - 0.701 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
18. PON2 ENSGALG00000009689 1416 1.429 - - 0.713 - - - - - - 0.716 paraoxonase 2 [Source:NCBI gene;Acc:395830]
19. DDX18 ENSGALG00000012147 12463 0.943 - - 0.943 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
20. ETV4 ENSGALG00000036678 2424 0.913 - - 0.913 - - - - - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
21. ACOT9 ENSGALG00000016351 330 0.912 - - 0.912 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
22. SORCS1 ENSGALG00000008465 468 0.911 - - 0.911 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
23. WBSCR17 581 0.91 - - 0.910 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
24. AP3M1 ENSGALG00000005070 712 0.908 - - 0.908 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
25. GOLGA2 ENSGALG00000004881 677 0.907 - - 0.907 - - - - - - - golgin A2, transcript variant X7
26. TSEN2 ENSGALG00000004981 1929 0.906 - - 0.906 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
27. FBXO34 ENSGALG00000032563 656 0.906 - - 0.906 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
28. RHOC ENSGALG00000001569 53 0.904 - - 0.904 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
29. TMEM200C ENSGALG00000030210 1434 0.904 - - 0.904 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
30. LHFP 167 0.904 - - 0.904 - - - - - - - lipoma HMGIC fusion partner
31. KIAA0195 KIAA0195 48 0.903 - - 0.903 - - - - - - -
32. MT1 MT1 218 0.903 - - 0.903 - - - - - - -
33. GRIK3 ENSGALG00000002098 111 0.903 - - 0.903 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
34. POMC ENSGALG00000016600 99 0.903 - - 0.903 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
35. PLEKHG5 ENSGALG00000027476 42 0.901 - - 0.901 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
36. GNMT ENSGALG00000043290 3288 0.901 - - 0.901 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
37. ENTPD5 ENSGALG00000010202 69 0.9 - - 0.900 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
38. SPON2 ENSGALG00000038433 1240 0.9 - - 0.900 - - - - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
39. IP6K1 ENSGALG00000002510 827 0.899 - - 0.899 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
40. MGMT ENSGALG00000042949 53 0.899 - - 0.899 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
41. ZNF276 ENSGALG00000000513 2410 0.898 - - 0.898 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
42. Sep-02 Sep-02 206 0.897 - - 0.897 - - - - - - -
43. C19H17ORF85 C19H17ORF85 2538 0.897 - - 0.897 - - - - - - -
44. GBGT1 ENSGALG00000003340 399 0.896 - - 0.896 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
45. EIF2AK2 ENSGALG00000010560 749 0.896 - - 0.896 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
46. XPC ENSGALG00000006357 2484 0.894 - - 0.894 - - - - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
47. CCDC25 ENSGALG00000016586 351 0.894 - - 0.894 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
48. ADAMTS2 ENSGALG00000032974 141 0.892 - - 0.892 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
49. RPUSD1 ENSGALG00000005315 651 0.892 - - 0.892 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
50. VRTN ENSGALG00000010232 692 0.89 - - 0.890 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
51. PTPN5 ENSGALG00000006368 440 0.89 - - 0.890 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
52. C5H14ORF166 C5H14ORF166 24176 0.889 - - 0.889 - - - - - - -
53. LRP2 ENSGALG00000010858 363 0.889 - - 0.889 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
54. C8H1ORF52 C8H1ORF52 118 0.889 - - 0.889 - - - - - - -
55. TMEM97 ENSGALG00000005702 2037 0.889 - - 0.889 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
56. SULT2B1L1 ENSGALG00000023472 569 0.889 - - 0.889 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
57. PVALB1 PVALB1 267 0.888 - - 0.888 - - - - - - -
58. DAPK3 ENSGALG00000037733 6215 0.888 - - 0.888 - - - - - - - death-associated protein kinase 3, transcript variant X2
59. PTDSS1 ENSGALG00000030185 5515 0.888 - - 0.888 - - - - - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
60. NCAPD3 ENSGALG00000001491 221 0.887 - - 0.887 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
61. METTL6 ENSGALG00000040665 4467 0.887 - - 0.887 - - - - - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
62. MAN1A1 ENSGALG00000014878 1061 0.886 - - 0.886 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
63. SDCBP ENSGALG00000015436 1228 0.884 - - 0.884 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
64. B3GNT7 ENSGALG00000007701 929 0.884 - - 0.884 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
65. NLGN1 ENSGALG00000040938 651 0.883 - - 0.883 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
66. LGALS3 ENSGALG00000012173 3306 0.883 - - 0.883 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
67. ZEB2 ENSGALG00000040465 315 0.883 - - 0.883 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
68. MAK16 ENSGALG00000001663 7455 0.883 - - 0.883 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
69. TRIM45 ENSGALG00000014818 1258 0.883 - - 0.883 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
70. SNX2 ENSGALG00000005337 590 0.883 - - 0.883 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
71. FRMD3 ENSGALG00000012577 999 0.882 - - 0.882 - - - - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
72. SECISBP2 ENSGALG00000010694 6990 0.882 - - 0.882 - - - - - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
73. TMEM38B ENSGALG00000027472 2465 0.881 - - 0.881 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
74. LYPD6B ENSGALG00000028759 831 0.879 - - 0.879 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
75. RFNG ENSGALG00000002841 1643 0.878 - - 0.878 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395789]
76. EXTL2 ENSGALG00000027984 808 0.878 - - 0.878 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
77. C-MET C-MET 1650 0.877 - - 0.877 - - - - - - -
78. DLG3 ENSGALG00000041900 3016 0.876 - - 0.876 - - - - - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
79. USP40 ENSGALG00000004228 1137 0.876 - - 0.876 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
80. TRIM37 ENSGALG00000005084 4036 0.875 - - 0.875 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
81. TRANK1 ENSGALG00000037629 2268 0.875 - - 0.875 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
82. CXorf30 CXorf30 172 0.873 - - 0.873 - - - - - - -
83. CASP1 ENSGALG00000001049 1067 0.873 - - 0.873 - - - - - - - caspase 1, transcript variant X2
84. PKP4 ENSGALG00000012561 3087 0.873 - - 0.873 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
85. WDR89 ENSGALG00000011827 1481 0.872 - - 0.872 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
86. MYO18A ENSGALG00000003741 1023 0.871 - - 0.871 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
87. ZNF423 ENSGALG00000003891 103 0.871 - - 0.871 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
88. PELI1 ENSGALG00000008837 11561 0.87 - - 0.870 - - - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
89. DBR1 ENSGALG00000043797 1896 0.87 - - 0.870 - - - - - - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
90. CASP9 ENSGALG00000001366 1356 0.869 - - 0.869 - - - - - - - caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]
91. LZIC ENSGALG00000002616 9052 0.867 - - 0.867 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
92. SCPEP1 ENSGALG00000003185 2322 0.865 - - 0.865 - - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
93. FAM178A FAM178A 2738 0.864 - - 0.864 - - - - - - -
94. UBE3B ENSGALG00000013851 1672 0.863 - - 0.863 - - - - - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
95. C5orf30 ENSGALG00000027512 1721 0.863 - - 0.863 - - - - - - - chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:HGNC:25052]
96. SYNCRIP ENSGALG00000015830 30555 0.862 - - 0.862 - - - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
97. ZC3H13 ENSGALG00000016984 21043 0.862 - - 0.862 - - - - - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
98. DPH3 3317 0.86 - - 0.860 - - - - - - - diphthamide biosynthesis 3
99. SLC4A4 ENSGALG00000031105 534 0.86 - - 0.860 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
100. BCCIP ENSGALG00000006617 13291 0.859 - - 0.859 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]

There are 508 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA