Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CAPN3

Gene Name Gene ID Reads Annotation
CAPN3 ENSGALG00000009050 3 calpain 3 [Source:NCBI gene;Acc:423233]











Genes with expression patterns similar to CAPN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CAPN3 ENSGALG00000009050 3 2 - - - - 1.000 1.000 - - - - calpain 3 [Source:NCBI gene;Acc:423233]
2. ARHGAP10 ENSGALG00000010031 31 1.442 - - - - 0.707 0.735 - - - - Rho GTPase activating protein 10 [Source:HGNC Symbol;Acc:HGNC:26099]
3. ENSGALG00000021517 ENSGALG00000021517 7 1 - - - - - 1.000 - - - -
4. SMC1B ENSGALG00000014228 19 1 - - - - - 1.000 - - - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
5. HEMGN ENSGALG00000045740 8 1 - - - - 1.000 - - - - - hemogen, transcript variant X1
6. TOR3A ENSGALG00000004216 1 1 - - - - - 1.000 - - - - torsin family 3 member A [Source:HGNC Symbol;Acc:HGNC:11997]
7. CCDC181 ENSGALG00000015221 10 1 - - - - 1.000 - - - - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
8. VCAM1 ENSGALG00000005257 102 1 - - - - 1.000 - - - - - vascular cell adhesion molecule 1, transcript variant X1
9. PIK3R4 ENSGALG00000040917 10 1 - - - - - 1.000 - - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
10. PGAP1 ENSGALG00000030789 3 1 - - - - 1.000 - - - - - post-GPI attachment to proteins 1, transcript variant X3
11. BRAF ENSGALG00000012865 2 1 - - - - 1.000 - - - - - B-Raf proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396239]
12. ENSGALG00000011449 ENSGALG00000011449 2 1 - - - - - 1.000 - - - -
13. CRYAA ENSGALG00000016199 12 1 - - - - - 1.000 - - - - crystallin alpha A [Source:NCBI gene;Acc:418546]
14. MYO1H ENSGALG00000005122 1 1 - - - - 1.000 - - - - - myosin IH [Source:HGNC Symbol;Acc:HGNC:13879]
15. ENSGALG00000000193 ENSGALG00000000193 19 1 - - - - 1.000 - - - - -
16. MRGBP ENSGALG00000005531 79 1 - - - - 1.000 - - - - - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
17. TXLNB ENSGALG00000013822 1 1 - - - - 1.000 - - - - - taxilin beta [Source:NCBI gene;Acc:395515]
18. SVOP ENSGALG00000034278 27 1 - - - - 1.000 - - - - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
19. TUSC1 22 1 - - - - 1.000 - - - - - tumor suppressor candidate 1
20. LIPML4 ENSGALG00000006302 2 1 - - - - - 1.000 - - - - lipase member M-like 4
21. EGF ENSGALG00000012155 8 1 - - - - - 1.000 - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
22. GAK ENSGALG00000015352 99 1 - - - - - 1.000 - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
23. ANKRD2 ENSGALG00000007539 13 1 - - - - 1.000 - - - - - ankyrin repeat domain 2 [Source:HGNC Symbol;Acc:HGNC:495]
24. ADAMTS15 ENSGALG00000001407 11 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
25. TRIM27.1 ENSGALG00000030397 19 1 - - - - 1.000 - - - - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
26. ATXN1L ENSGALG00000028253 17 1 - - - - 1.000 - - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
27. PBEF1 PBEF1 25 0.997 - - - - - 0.997 - - - -
28. KCNS3 ENSGALG00000016470 4 0.986 - - - - - 0.986 - - - - potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
29. TLR15 ENSGALG00000008166 29 0.982 - - - - - 0.982 - - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
30. RELN ENSGALG00000008193 43 0.981 - - - - 0.981 - - - - - reelin [Source:NCBI gene;Acc:427850]
31. ENSGALG00000027164 ENSGALG00000027164 8 0.979 - - - - - 0.979 - - - -
32. ATRN ENSGALG00000016034 16 0.979 - - - - - 0.979 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
33. ENSGALG00000027367 ENSGALG00000027367 7 0.975 - - - - - 0.975 - - - -
34. FAM150B 44 0.971 - - - - - 0.971 - - - - family with sequence similarity 150 member B, transcript variant X2
35. SLC22A18 ENSGALG00000006454 24 0.962 - - - - - 0.962 - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
36. CRYBA4 ENSGALG00000005634 56 0.96 - - - - - 0.960 - - - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
37. A1CF ENSGALG00000003765 36 0.96 - - - - - 0.960 - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
38. CCDC125 ENSGALG00000015572 51 0.958 - - - - - 0.958 - - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
39. TDRP ENSGALG00000016356 36 0.955 - - - - - 0.955 - - - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
40. PKD2 ENSGALG00000010921 55 0.953 - - - - - 0.953 - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
41. SNORA3 SNORA3 14 0.948 - - - - - 0.948 - - - -
42. NAALADL2 ENSGALG00000023670 39 0.947 - - - - - 0.947 - - - - N-acetylated alpha-linked acidic dipeptidase like 2 [Source:HGNC Symbol;Acc:HGNC:23219]
43. GRK6 ENSGALG00000014054 6 0.937 - - - - - 0.937 - - - - G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:HGNC:4545]
44. ANKRD40L ENSGALG00000026189 887 0.932 - - - - - 0.932 - - - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
45. ACE2 ENSGALG00000016554 7 0.929 - - - - - 0.929 - - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
46. RTKN2 ENSGALG00000002980 50 0.924 - - - - - 0.924 - - - - rhotekin 2 [Source:NCBI gene;Acc:423660]
47. COQ2 ENSGALG00000041294 25 0.906 - - - - - 0.906 - - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
48. TAOK1 ENSGALG00000004082 77 0.905 - - - - - 0.905 - - - - TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]
49. ENSGALG00000010911 ENSGALG00000010911 469 0.903 - - - - - 0.903 - - - -
50. HOXB13 ENSGALG00000033154 71 0.901 - - - - - 0.901 - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
51. IKZF1 ENSGALG00000013086 58 0.897 - - - - - 0.897 - - - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
52. SLC5A7 ENSGALG00000016804 93 0.897 - - - - 0.897 - - - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
53. PIFO ENSGALG00000023763 11 0.895 - - - - - 0.895 - - - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
54. GSC ENSGALG00000010974 7 0.895 - - - - - 0.895 - - - - goosecoid homeobox [Source:NCBI gene;Acc:396273]
55. MBD5 ENSGALG00000012449 27 0.893 - - - - 0.893 - - - - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
56. RGS8 ENSGALG00000026263 124 0.886 - - - - - 0.886 - - - - regulator of G protein signaling 8 [Source:HGNC Symbol;Acc:HGNC:16810]
57. BICD2 ENSGALG00000005249 17 0.885 - - - - - 0.885 - - - - BICD cargo adaptor 2 [Source:HGNC Symbol;Acc:HGNC:17208]
58. SLC12A8 ENSGALG00000012045 39 0.882 - - - - - 0.882 - - - - solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
59. AVD ENSGALG00000023622 22 0.881 - - - - - 0.881 - - - - avidin [Source:NCBI gene;Acc:396260]
60. ACVR1C ENSGALG00000041257 37 0.878 - - - - - 0.878 - - - - activin A receptor type 1C [Source:HGNC Symbol;Acc:HGNC:18123]
61. ENSGALG00000004951 ENSGALG00000004951 18 0.877 - - - - - 0.877 - - - -
62. CMYA5 16 0.876 - - - - 0.876 - - - - - cardiomyopathy associated 5
63. SLC13A5 ENSGALG00000005995 23 0.869 - - - - 0.869 - - - - - solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
64. SKI ENSGALG00000001229 50 0.869 - - - - - 0.869 - - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
65. PNPLA7 ENSGALG00000008736 206 0.867 - - - - - 0.867 - - - - patatin like phospholipase domain containing 7 [Source:NCBI gene;Acc:427774]
66. B9D1 ENSGALG00000005096 760 0.864 - - - - - 0.864 - - - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
67. C3ORF64 C3ORF64 49 0.862 - - - - - 0.862 - - - -
68. SPATA7 ENSGALG00000010607 85 0.861 - - - - - 0.861 - - - - spermatogenesis associated 7 [Source:HGNC Symbol;Acc:HGNC:20423]
69. PLAC8 PLAC8 20 0.861 - - - - - 0.861 - - - -
70. TMEM62 ENSGALG00000009260 1170 0.857 - - - - - 0.857 - - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
71. DBN1 ENSGALG00000033405 216 0.857 - - - - 0.857 - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
72. SLITRK4 ENSGALG00000007242 165 0.856 - - - - - 0.856 - - - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
73. CLDN3 ENSGALG00000022557 189 0.854 - - - - - 0.854 - - - - claudin 3 [Source:NCBI gene;Acc:374029]
74. GRAP2 ENSGALG00000012056 16 0.854 - - - - - 0.854 - - - - GRB2-related adaptor protein 2, transcript variant X3
75. MIS18BP1 ENSGALG00000012452 1358 0.854 - - - - - 0.854 - - - - MIS18 binding protein 1
76. WDR90_1 ENSGALG00000028172 2 0.85 - - - - - 0.850 - - - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
77. HPX ENSGALG00000022586 46 0.85 - - - - - 0.850 - - - - hemopexin [Source:HGNC Symbol;Acc:HGNC:5171]
78. RBPJ ENSGALG00000014365 119 0.847 - - - - - 0.847 - - - - recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]
79. SPAST ENSGALG00000010620 132 0.842 - - - - - 0.842 - - - - spastin [Source:NCBI gene;Acc:421481]
80. PRLR ENSGALG00000003446 19 0.841 - - - - 0.841 - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
81. WNT5B ENSGALG00000012998 35 0.841 - - - - - 0.841 - - - - Wnt family member 5B [Source:NCBI gene;Acc:418154]
82. MGRN1 ENSGALG00000037492 372 0.834 - - - - - 0.834 - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
83. MYBPC1 ENSGALG00000012783 317 0.83 - - - - - 0.830 - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
84. GPHB5 ENSGALG00000028839 45 0.826 - - - - - 0.826 - - - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
85. VTI1A ENSGALG00000008880 279 0.824 - - - - - 0.824 - - - - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
86. KCNT2 ENSGALG00000041680 36 0.823 - - - - - 0.823 - - - - potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
87. ENSGALG00000023475 ENSGALG00000023475 19 0.821 - - - - - 0.821 - - - -
88. CXADR ENSGALG00000015701 96 0.818 - - - - - 0.818 - - - - coxsackie virus and adenovirus receptor, transcript variant X2
89. LCA5 ENSGALG00000015878 160 0.811 - - - - - 0.811 - - - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
90. PTDSS2 ENSGALG00000004300 682 0.811 - - - - 0.811 - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
91. GNAL ENSGALG00000013785 108 0.796 - - - - - 0.796 - - - - G protein subunit alpha L [Source:NCBI gene;Acc:474379]
92. MFSD12 ENSGALG00000000795 1150 0.795 - - - - - 0.795 - - - - major facilitator superfamily domain containing 12 [Source:HGNC Symbol;Acc:HGNC:28299]
93. MSH3 ENSGALG00000015589 83 0.795 - - - - - 0.795 - - - - mutS homolog 3 [Source:HGNC Symbol;Acc:HGNC:7326]
94. TMEM170A ENSGALG00000002861 2194 0.793 - - - - - 0.793 - - - - transmembrane protein 170A [Source:NCBI gene;Acc:770531]
95. MIER3 ENSGALG00000014721 57 0.788 - - - - - 0.788 - - - - MIER family member 3, transcript variant X6
96. GAR1 ENSGALG00000020164 149 0.787 - - - - - 0.787 - - - - GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]
97. ATP6V0D1 ENSGALG00000002237 13 0.786 - - - - 0.786 - - - - - ATPase H+ transporting V0 subunit d1 [Source:NCBI gene;Acc:415674]
98. MSI2 ENSGALG00000005567 31 0.783 - - - - - 0.783 - - - - musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]
99. NR2C2 ENSGALG00000008519 28 0.781 - - - - 0.781 - - - - - nuclear receptor subfamily 2 group C member 2 [Source:HGNC Symbol;Acc:HGNC:7972]
100. MICAL1 ENSGALG00000032190 134 0.78 - - - - - 0.780 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:NCBI gene;Acc:429474]

There are 29 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA